RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ZNF788Q6ZQV5 615 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 WDR31Q8NA23 367 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 Q8NFD4 153 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 SARAFQ96BY9 339 aa8.93□□□□□ -0.98
PALB2-206ENST00000568219 SLC25A10Q9UBX3 287 aaPredicted RBP8.93□□□□□ -0.98
PALB2-206ENST00000568219 H3BVH4 76 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 K7ESF4 209 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 M0R296 226 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 VDAC2P45880 294 aaPredicted RBP8.92□□□□□ -0.98
PALB2-206ENST00000568219 ZNF134P52741 427 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 PAX2Q02962 417 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 Q6ZR03 302 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 EXOC3-AS1Q8N2X6 119 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 KLK15Q9H2R5 256 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 DYNLRB1Q9NP97 96 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 TMEM160Q9NX00 188 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 ZNF257Q9Y2Q1 563 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 LY96Q9Y6Y9 160 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 J3KRW8 73 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 COX7A1P24310 79 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 CD69Q07108 199 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 PET117Q6UWS5 81 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 IDI2-AS1Q9NZ38 188 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 UFC1Q9Y3C8 167 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.92□□□□□ -0.984e-9■■■■■ 29.8
PALB2-206ENST00000568219 IGHV3OR16-8A0A075B7F1 116 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 SCGB1C2P0DMR2 95 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 ESDP10768 282 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 TIMM23BQ5SRD1 257 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 MORN5Q5VZ52 161 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 LCNL1Q6ZST4 164 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 ZCCHC24Q8N2G6 241 aaKnown RBP8.92□□□□□ -0.98
PALB2-206ENST00000568219 AAMDCQ9H7C9 122 aa8.92□□□□□ -0.98
PALB2-206ENST00000568219 CECR9P0C854 216 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 IGHV1-2P23083 117 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 CTRLP40313 264 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 NRN1LQ496H8 165 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 Q6ZSR3 168 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 SIGMAR1Q99720 223 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 C19orf24Q9BVV8 132 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 Q9H3A6 140 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 CHODLQ9H9P2 273 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 TANC2Q9HCD6 1990 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 SAMD5Q5TGI4 173 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 RASL11BQ9BPW5 248 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 MRPL32Q9BYC8 188 aaKnown RBP8.91□□□□□ -0.98
PALB2-206ENST00000568219 HIGD1AQ9Y241 93 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 PPIAL4EA0A075B759 164 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 A0A1B0GV72 72 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 SMIM27A0A1W2PRY6 76 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 CGB1A6NKQ9 187 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 K7EMI3 77 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 PPIAL4FP0DN26 164 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 ACP1P24666 158 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 BRWD1-AS2P59051 145 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 FAM214BQ7L5A3 538 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 ZADH2Q8N4Q0 377 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 DEFB125Q8N687 156 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 NEUROG1Q92886 237 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 PRELID3AQ96N28 172 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 HIST1H4GQ99525 98 aa8.91□□□□□ -0.98
PALB2-206ENST00000568219 TGFAP01135 160 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 MEF2CQ06413 473 aaPredicted RBP8.9□□□□□ -0.98
PALB2-206ENST00000568219 FAM169BQ8N8A8 192 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 RNF7Q9UBF6 113 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 C2orf16Q68DN1 1984 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 FRYQ5TBA9 3013 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 PPIAL4CA0A0B4J2A2 164 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 A0A1B0GWB2 263 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 UPK2O00526 184 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 PPIAL4GP0DN37 164 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 SEC11AP67812 179 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 SCGB1D4Q6XE38 83 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 MRPL20Q9BYC9 149 aaKnown RBP8.9□□□□□ -0.98
PALB2-206ENST00000568219 NAV3Q8IVL0 2385 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 TTC28Q96AY4 2481 aa8.9□□□□□ -0.98
PALB2-206ENST00000568219 MMP23AO75900 390 aa8.9□□□□□ -0.99
PALB2-206ENST00000568219 NCR2O95944 276 aa8.9□□□□□ -0.99
PALB2-206ENST00000568219 CCL3L1P16619 93 aa8.9□□□□□ -0.99
PALB2-206ENST00000568219 BCL6BQ8N143 479 aaPredicted RBP8.9□□□□□ -0.99
PALB2-206ENST00000568219 VSTM2AQ8TAG5 236 aa8.9□□□□□ -0.99
PALB2-206ENST00000568219 C11orf52Q96A22 123 aa8.9□□□□□ -0.99
PALB2-206ENST00000568219 RABAC1Q9UI14 185 aa8.9□□□□□ -0.99
PALB2-206ENST00000568219 MALRD1Q5VYJ5 2156 aa8.9□□□□□ -0.99
PALB2-206ENST00000568219 COL6A6A6NMZ7 2263 aa8.89□□□□□ -0.99
PALB2-206ENST00000568219 TMEM189A5PLL7 270 aa8.89□□□□□ -0.99
PALB2-206ENST00000568219 VSTM5A8MXK1 200 aa8.89□□□□□ -0.99
PALB2-206ENST00000568219 FCGR2BP31994 310 aaPredicted RBP8.89□□□□□ -0.99
PALB2-206ENST00000568219 IFI27P40305 119 aaPredicted RBP8.89□□□□□ -0.99
PALB2-206ENST00000568219 IQCF6A8MYZ5 107 aa8.89□□□□□ -0.99
PALB2-206ENST00000568219 SMKR1H3BMG3 65 aa8.89□□□□□ -0.99
PALB2-206ENST00000568219 TOMM40O96008 361 aa8.89□□□□□ -0.99
PALB2-206ENST00000568219 SRSF9Q13242 221 aaKnown RBP eCLIP8.89□□□□□ -0.99
PALB2-206ENST00000568219 CHCHD1Q96BP2 118 aaKnown RBP8.89□□□□□ -0.99
PALB2-206ENST00000568219 PIEZO2Q9H5I5 2752 aa8.89□□□□□ -0.99
PALB2-206ENST00000568219 IGKV3D-15A0A087WSY6 115 aa8.89□□□□□ -0.99
PALB2-206ENST00000568219 TNFRSF1AP19438 455 aa8.89□□□□□ -0.99
PALB2-206ENST00000568219 PPIFP30405 207 aaKnown RBP8.89□□□□□ -0.99
PALB2-206ENST00000568219 PRCDQ00LT1 54 aa8.89□□□□□ -0.99
PALB2-206ENST00000568219 PSG3Q16557 428 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms