RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	LIPF	P07098	398 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	IGLL1	P15814	213 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	BLVRB	P30043	206 aa	Predicted RBP	3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	GPR183	P32249	361 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	DAP3	P51398	398 aa	Known RBP	3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	ZNF83	P51522	516 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	CCL11	P51671	97 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	PAX9	P55771	341 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	RIPPLY3	P57055	190 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	KRTAP10-12	P60413	245 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	HERV-K104	P61576	105 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	FUT7	Q11130	342 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	GAGE5	Q13069	117 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	GAGE6	Q13070	117 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	TSTA3	Q13630	321 aa	Predicted RBP	3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	LTC4S	Q16873	150 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	RTL8B	Q17RB0	113 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	VWC2	Q2TAL6	325 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	DEFB134	Q4QY38	66 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	MPV17L2	Q567V2	206 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	ZNF766	Q5HY98	468 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	PRAMEF5	Q5TYX0	476 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	PRAMEF6	Q5VXH4	476 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	LCN15	Q6UWW0	184 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	RPS19BP1	Q86WX3	136 aa	Known RBP	3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	ODF3L1	Q8IXM7	274 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	SAXO1	Q8IYX7	474 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	OR5AS1	Q8N127	324 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	TTC9C	Q8N5M4	171 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	OR4X2	Q8NGF9	303 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	OR4F5	Q8NH21	305 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	OR2AE1	Q8NHA4	323 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	PIFO	Q8TCI5	191 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	BLNK	Q8WV28	456 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	TAF15	Q92804	592 aa	Known RBP eCLIP	3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	GPR82	Q96P67	336 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	PBOV1	Q9GZY1	135 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	GEMIN7	Q9H840	131 aa	Known RBP	3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	GNB4	Q9HAV0	340 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	BOK	Q9UMX3	212 aa	Predicted RBP	3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	KLF13	Q9Y2Y9	288 aa	Predicted RBP	3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	SOX21	Q9Y651	276 aa	Predicted RBP	3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	CACNA1D	Q01668	2161 aa		3.9	□□□□□ -1.78
CBFB-208	ENST00000567947	TRGV10	A0A0A0MS01	117 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947		A0A1B0GV50	99 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947		A0A1W2PQD3	144 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	TMEM213	A2RRL7	107 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	OR2T8	A6NH00	312 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	C2orf70	A6NJV1	201 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	SLC22A20	A6NK97	555 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	LRRC30	A6NM36	301 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	ZNF850	A8MQ14	1090 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	C4orf51	C9J302	202 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	SYNGR2	O43760	224 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	CHST1	O43916	411 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	SSSCA1	O60232	199 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	GNG7	O60262	68 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	HSBP1	O75506	76 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	CLEC3B	P05452	202 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	COX8A	P10176	69 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	FABP2	P12104	132 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	MDK	P21741	143 aa	Predicted RBP	3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	GRB2	P62993	217 aa	Known RBP	3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	TGFBR3	Q03167	851 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	TIMM23B	Q5SRD1	257 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	TMEM14EP	Q6UXP3	125 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	PRSS41	Q7RTY9	318 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	ATP5L2	Q7Z4Y8	100 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	BOD1L2	Q8IYS8	172 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	RPP25L	Q8N5L8	163 aa	Known RBP	3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	ZNF645	Q8N7E2	425 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	OR10AG1	Q8NH19	301 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	OR4A5	Q8NH83	315 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	TSKU	Q8WUA8	353 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	RND1	Q92730	232 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	ADAT3	Q96EY9	351 aa	Predicted RBP	3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	AMELY	Q99218	206 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	DERL1	Q9BUN8	251 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	TMEM147	Q9BVK8	224 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	C1QTNF5	Q9BXJ0	243 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	CLEC7A	Q9BXN2	247 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	ZNF160	Q9HCG1	818 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	NPVF	Q9HCQ7	196 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	SCRT2	Q9NQ03	307 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	ZNF71	Q9NQZ8	489 aa	Predicted RBP	3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	TMEM160	Q9NX00	188 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	ZNF391	Q9UJN7	358 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	RALY	Q9UKM9	306 aa	Known RBP	3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	CYSLTR1	Q9Y271	337 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	ZNF257	Q9Y2Q1	563 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	MAP1A	P78559	2803 aa	Predicted RBP	3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	KIAA1549	Q9HCM3	1950 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	ABCA4	P78363	2273 aa		3.9	□□□□□ -1.79
CBFB-208	ENST00000567947	MED12L	Q86YW9	2145 aa		3.89	□□□□□ -1.79
CBFB-208	ENST00000567947	HRNR	Q86YZ3	2850 aa	Predicted RBP	3.89	□□□□□ -1.79
CBFB-208	ENST00000567947	SPG11	Q96JI7	2443 aa		3.89	□□□□□ -1.79
CBFB-208	ENST00000567947	TRAV8-6	A0A0B4J262	113 aa		3.89	□□□□□ -1.79
CBFB-208	ENST00000567947	KIR2DS1	A0A191URI9	304 aa		3.89	□□□□□ -1.79
CBFB-208	ENST00000567947		A0A1W2PPM0	123 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms