RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 ZNF56Q15929 161 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 C18orf32Q8TCD1 76 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 PI4KAP42356 2102 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 MGAMO43451 1857 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 FAM90A9PA6NNJ1 464 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 SS18L1O75177 396 aaPredicted RBP10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 NCR2O95944 276 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 GLRXP35754 106 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 SYT8Q8NBV8 401 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 LINC00473A8K010 186 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 D6R8Y8 96 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 EPOPA6NHQ4 379 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 NPPCP23582 126 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 MRPL14Q6P1L8 145 aaKnown RBP10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 SLC25A48Q6ZT89 311 aaKnown RBP10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 Q6ZVH6 145 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 LYPD6BQ8NI32 183 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 CYYR1Q96J86 154 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 NXT2Q9NPJ8 142 aaKnown RBP10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 IGKV1-6A0A0C4DH72 117 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 A8MWV9 139 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 IGKV1D-33P01593 117 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 IGKV1-33P01594 117 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 IGHV1-2P23083 117 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 C10orf55Q5SWW7 151 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 TM4SF5O14894 197 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 TMEM95Q3KNT9 176 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 HS3ST6Q96QI5 342 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 RNF115Q9Y4L5 304 aa10.24□□□□□ -0.77
CSPG4P13-202ENST00000567704 FABP5P3A8MUU1 101 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 GFRA3O60609 400 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 MYOD1P15172 320 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 YPEL3P61236 119 aaPredicted RBP10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 PSG3Q16557 428 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 MEIG1Q5JSS6 88 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 ZNF114Q8NC26 417 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 UBTD1Q9HAC8 227 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 PKDREJQ9NTG1 2253 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 TMEM262E9PQX1 116 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 FAM106CPP0CH98 169 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 IGLL1P15814 213 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 RAB9AP51151 201 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 GEMIN7Q9H840 131 aaKnown RBP10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 NOTCH3Q9UM47 2321 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 THSD7BQ9C0I4 1608 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 CREBBPQ92793 2442 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 IGHV2OR16-5A0A0B4J2B6 119 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 ADAMTSL5Q6ZMM2 481 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 ZNF815PA8K554 130 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 PF4V1P10720 104 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 Q6ZS49 121 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 EXOC3-AS1Q8N2X6 119 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 KIR3DL3Q8N743 410 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 MRAP2Q96G30 205 aa10.23□□□□□ -0.77
CSPG4P13-202ENST00000567704 WISP1O95388 367 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 IGHV4-39P01824 125 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 PPBPP02775 128 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 GAGE2BQ13066 116 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 GAGE2EQ4V326 116 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 C19orf54Q5BKX5 351 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 GAGE2DQ9UEU5 116 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 LOC105371242A0A075B767 164 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 CDX4O14627 284 aaPredicted RBP10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 EBLN2Q6P2I7 272 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 C21orf62Q9NYP8 219 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 EP300Q09472 2414 aaPredicted RBP10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 EFEMP2O95967 443 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 RNASE1P07998 156 aaKnown RBP10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 FAM159AQ6UWV7 190 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 TEX43Q6ZNM6 134 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 TRAV8-1A0A0A6YYK1 113 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 PRB3Q04118 309 aaPredicted RBP10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 PAPPA-AS1Q5QFB9 102 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 FAM71F2Q6NXP2 309 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 RPRMLQ8N4K4 120 aa10.22□□□□□ -0.77
CSPG4P13-202ENST00000567704 NPIPB5A8MRT5 1133 aa10.21□□□□□ -0.77
CSPG4P13-202ENST00000567704 CFHR1Q03591 330 aa10.21□□□□□ -0.77
CSPG4P13-202ENST00000567704 ZFAND6Q6FIF0 208 aa10.21□□□□□ -0.77
CSPG4P13-202ENST00000567704 ASCL4Q6XD76 172 aa10.21□□□□□ -0.77
CSPG4P13-202ENST00000567704 CHD3Q12873 2000 aaKnown RBP10.21□□□□□ -0.77
CSPG4P13-202ENST00000567704 TCRAP04437 139 aa10.21□□□□□ -0.77
CSPG4P13-202ENST00000567704 NCOR1O75376 2440 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 TRBV6-6A0A0A6YYG2 114 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 PRTN3P24158 256 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 SRSF1Q07955 248 aaKnown RBP eCLIP10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 MLANAQ16655 118 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 ZNF524Q96C55 264 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 PLA2G2EQ9NZK7 142 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 TRIOBPQ9H2D6 2365 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 DNAL4O96015 105 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 IGKV3-20P01619 116 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 ASIPP42127 132 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 RNF125Q96EQ8 232 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 LINC00312Q9Y6C7 94 aa10.21□□□□□ -0.78
CSPG4P13-202ENST00000567704 PLCE1Q9P212 2302 aa10.2□□□□□ -0.78
CSPG4P13-202ENST00000567704 FAM90A1Q86YD7 464 aa10.2□□□□□ -0.78
CSPG4P13-202ENST00000567704 METRNQ9UJH8 293 aa10.2□□□□□ -0.78
CSPG4P13-202ENST00000567704 SPAARA0A1B0GVQ0 90 aa10.2□□□□□ -0.78
CSPG4P13-202ENST00000567704 CD300EQ496F6 205 aaPredicted RBP10.2□□□□□ -0.78
CSPG4P13-202ENST00000567704 ZC2HC1BQ5TFG8 222 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms