RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 OR4D10Q8NGI6 311 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 OR13C8Q8NGS7 320 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 COPZ2Q9P299 210 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 SMIM31A0A1B0GVY4 71 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 GSTZ1O43708 216 aaPredicted RBP10.93□□□□□ -0.66
PALB2-205ENST00000567003 HPGDSO60760 199 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 CDK2AP2O75956 126 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 APOA1P02647 267 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 CD3DP04234 171 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 RD3LP0DJH9 198 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 PSG1P11464 419 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 RORCP51449 518 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 DAD1P61803 113 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 MEF2DQ14814 521 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 RNASE10Q5GAN6 216 aaKnown RBP10.93□□□□□ -0.66
PALB2-205ENST00000567003 FOXI2Q6ZQN5 318 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 RNASEH2CQ8TDP1 164 aaKnown RBP10.93□□□□□ -0.66
PALB2-205ENST00000567003 YIPF6Q96EC8 236 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 C7orf50Q9BRJ6 194 aaKnown RBP10.93□□□□□ -0.66
PALB2-205ENST00000567003 PBDC1Q9BVG4 233 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 Q9H521 79 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 KLK11Q9UBX7 282 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 CACNG5Q9UF02 275 aa10.93□□□□□ -0.66
PALB2-205ENST00000567003 TEX48A0A1B0GUV7 120 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 CEBPZOSA8MTT3 80 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 HBE1P02100 147 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 PRM2P04554 102 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 OR5AC1P0C628 307 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 AARDQ4LEZ3 155 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 CCDC71LQ8N9Z2 235 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 OR52I2Q8NH67 350 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 MARCH1Q8TCQ1 289 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 GPR146Q96CH1 333 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 RNF125Q96EQ8 232 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.92□□□□□ -0.66
PALB2-205ENST00000567003 GOLT1BQ9Y3E0 138 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 TMED3Q9Y3Q3 217 aa10.92□□□□□ -0.66
PALB2-205ENST00000567003 SOCS3O14543 225 aa10.91□□□□□ -0.66
PALB2-205ENST00000567003 NCS1P62166 190 aa10.91□□□□□ -0.66
PALB2-205ENST00000567003 OXA1LQ15070 435 aa10.91□□□□□ -0.66
PALB2-205ENST00000567003 ZNF79Q15937 498 aa10.91□□□□□ -0.66
PALB2-205ENST00000567003 SCGB2B2Q4G0G5 96 aa10.91□□□□□ -0.66
PALB2-205ENST00000567003 FAM78BQ5VT40 261 aa10.91□□□□□ -0.66
PALB2-205ENST00000567003 OR52E5Q8NH55 327 aa10.91□□□□□ -0.66
PALB2-205ENST00000567003 COQ8AQ8NI60 647 aa10.91□□□□□ -0.66
PALB2-205ENST00000567003 FAT1Q14517 4588 aa10.9□□□□□ -0.66
PALB2-205ENST00000567003 ATP6V1G2O95670 118 aa10.9□□□□□ -0.66
PALB2-205ENST00000567003 PSG9Q00887 426 aa10.9□□□□□ -0.66
PALB2-205ENST00000567003 RRN3P1Q2M238 152 aa10.9□□□□□ -0.66
PALB2-205ENST00000567003 SELENOHQ8IZQ5 122 aaKnown RBP10.9□□□□□ -0.66
PALB2-205ENST00000567003 ARRDC1Q8N5I2 433 aa10.9□□□□□ -0.66
PALB2-205ENST00000567003 C20orf173Q96LM9 149 aa10.9□□□□□ -0.66
PALB2-205ENST00000567003 ATG101Q9BSB4 218 aa10.9□□□□□ -0.66
PALB2-205ENST00000567003 TMEM222Q9H0R3 208 aa10.9□□□□□ -0.66
PALB2-205ENST00000567003 NBDYA0A0U1RRE5 68 aa10.89□□□□□ -0.67
PALB2-205ENST00000567003 CDS2O95674 445 aa10.89□□□□□ -0.67
PALB2-205ENST00000567003 ID1P41134 155 aa10.89□□□□□ -0.67
PALB2-205ENST00000567003 PSMB3P49720 205 aa10.89□□□□□ -0.67
PALB2-205ENST00000567003 ZNF90Q03938 601 aa10.89□□□□□ -0.67
PALB2-205ENST00000567003 ETFRF1Q6IPR1 90 aa10.89□□□□□ -0.67
PALB2-205ENST00000567003 FAAP20Q6NZ36 180 aa10.89□□□□□ -0.67
PALB2-205ENST00000567003 C6orf223Q8N319 242 aa10.89□□□□□ -0.67
PALB2-205ENST00000567003 ZFAND1Q8TCF1 268 aa10.89□□□□□ -0.67
PALB2-205ENST00000567003 GLYATL2Q8WU03 294 aa10.89□□□□□ -0.67
PALB2-205ENST00000567003 ZNF705GA8MUZ8 300 aaPredicted RBP10.88□□□□□ -0.67
PALB2-205ENST00000567003 FAM25AB3EWG3 89 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 FAM25CB3EWG5 89 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 FAM25GB3EWG6 89 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 LYZP61626 148 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 VBP1P61758 197 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 NMSQ5H8A3 153 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 FAM219AQ8IW50 185 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 C15orf53Q8NAA6 179 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 ZNRF2Q8NHG8 242 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 TERB2Q8NHR7 220 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 RBPMSQ93062 196 aaKnown RBP10.88□□□□□ -0.67
PALB2-205ENST00000567003 CLUHP3Q96NS8 147 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 MAGT1Q9H0U3 335 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 NAA60Q9H7X0 242 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 PRR13Q9NZ81 148 aa10.88□□□□□ -0.67
PALB2-205ENST00000567003 IGKV1D-37A0A075B6S9 117 aa10.87□□□□□ -0.67
PALB2-205ENST00000567003 A0A0J9YX75 114 aa10.87□□□□□ -0.67
PALB2-205ENST00000567003 TEX13DA0A0J9YY54 714 aaPredicted RBP10.87□□□□□ -0.67
PALB2-205ENST00000567003 NUDT3O95989 172 aa10.87□□□□□ -0.67
PALB2-205ENST00000567003 PAX9P55771 341 aa10.87□□□□□ -0.67
PALB2-205ENST00000567003 OR2F1Q13607 317 aa10.87□□□□□ -0.67
PALB2-205ENST00000567003 TMEM268Q5VZI3 342 aa10.87□□□□□ -0.67
PALB2-205ENST00000567003 EBLN2Q6P2I7 272 aa10.87□□□□□ -0.67
PALB2-205ENST00000567003 Q8N1X5 172 aa10.87□□□□□ -0.67
PALB2-205ENST00000567003 RTBDNQ9BSG5 229 aaPredicted RBP10.87□□□□□ -0.67
PALB2-205ENST00000567003 TMEM208Q9BTX3 173 aa10.87□□□□□ -0.67
PALB2-205ENST00000567003 SCRT2Q9NQ03 307 aa10.87□□□□□ -0.67
PALB2-205ENST00000567003 MTFP1Q9UDX5 166 aa10.87□□□□□ -0.67
PALB2-205ENST00000567003 ZFP92A6NM28 416 aa10.86□□□□□ -0.67
PALB2-205ENST00000567003 RAB3DO95716 219 aa10.86□□□□□ -0.67
PALB2-205ENST00000567003 DEFB130BP0DP73 79 aa10.86□□□□□ -0.67
PALB2-205ENST00000567003 DEFB130AP0DP74 79 aa10.86□□□□□ -0.67
PALB2-205ENST00000567003 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
PALB2-205ENST00000567003 SUPT4H1P63272 117 aaKnown RBP10.86□□□□□ -0.67
PALB2-205ENST00000567003 FCN2Q15485 313 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms