RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 IGHV4-4A0A075B6R2 117 aa10.81□□□□□ -0.68
RNF40-209ENST00000566703 A0A0B4J2A0 478 aa10.81□□□□□ -0.68
RNF40-209ENST00000566703 ANKRD20A5PA0PJZ0 165 aa10.81□□□□□ -0.68
RNF40-209ENST00000566703 GPX4P36969 197 aaPredicted RBP10.81□□□□□ -0.68
RNF40-209ENST00000566703 NKX2-1P43699 371 aaPredicted RBP10.81□□□□□ -0.68
RNF40-209ENST00000566703 ALDH3B2P48448 385 aa10.81□□□□□ -0.68
RNF40-209ENST00000566703 IL18Q14116 193 aa10.81□□□□□ -0.68
RNF40-209ENST00000566703 OR8G2PQ6IF36 304 aa10.81□□□□□ -0.68
RNF40-209ENST00000566703 CLVS1Q8IUQ0 354 aaPredicted RBP10.81□□□□□ -0.68
RNF40-209ENST00000566703 OR51S1Q8NGJ8 323 aa10.81□□□□□ -0.68
RNF40-209ENST00000566703 OR51G1Q8NGK1 321 aa10.81□□□□□ -0.68
RNF40-209ENST00000566703 NEU1Q99519 415 aa10.81□□□□□ -0.68
RNF40-209ENST00000566703 MRPS26Q9BYN8 205 aaKnown RBP10.81□□□□□ -0.68
RNF40-209ENST00000566703 SHPKQ9UHJ6 478 aa10.81□□□□□ -0.68
RNF40-209ENST00000566703 AGRNO00468 2067 aa10.81□□□□□ -0.68
RNF40-209ENST00000566703 HLA-DRB4P13762 266 aa10.8□□□□□ -0.68
RNF40-209ENST00000566703 SMCO1Q147U7 214 aa10.8□□□□□ -0.68
RNF40-209ENST00000566703 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
RNF40-209ENST00000566703 LGI3Q8N145 548 aa10.8□□□□□ -0.68
RNF40-209ENST00000566703 DTD1Q8TEA8 209 aa10.8□□□□□ -0.68
RNF40-209ENST00000566703 CLUHP3Q96NS8 147 aa10.8□□□□□ -0.68
RNF40-209ENST00000566703 RSL24D1Q9UHA3 163 aaKnown RBP10.8□□□□□ -0.68
RNF40-209ENST00000566703 HLA-DRB4X5D2U9 266 aa10.8□□□□□ -0.68
RNF40-209ENST00000566703 DEFB131BA0A096LNP1 70 aa10.79□□□□□ -0.68
RNF40-209ENST00000566703 SMIM9A6NGZ8 99 aa10.79□□□□□ -0.68
RNF40-209ENST00000566703 ANXA3P12429 323 aa10.79□□□□□ -0.68
RNF40-209ENST00000566703 SRPXP78539 464 aa10.79□□□□□ -0.68
RNF40-209ENST00000566703 SPCS2Q15005 226 aa10.79□□□□□ -0.68
RNF40-209ENST00000566703 C1orf194Q5T5A4 169 aa10.79□□□□□ -0.68
RNF40-209ENST00000566703 RNF125Q96EQ8 232 aa10.79□□□□□ -0.68
RNF40-209ENST00000566703 BCL7BQ9BQE9 202 aa10.79□□□□□ -0.68
RNF40-209ENST00000566703 XCL2Q9UBD3 114 aa10.79□□□□□ -0.68
RNF40-209ENST00000566703 KMT2AQ03164 3969 aa10.78□□□□□ -0.68
RNF40-209ENST00000566703 TMEM189A5PLL7 270 aa10.78□□□□□ -0.68
RNF40-209ENST00000566703 AMBPP02760 352 aa10.78□□□□□ -0.68
RNF40-209ENST00000566703 FABP1P07148 127 aa10.78□□□□□ -0.68
RNF40-209ENST00000566703 ID1P41134 155 aa10.78□□□□□ -0.68
RNF40-209ENST00000566703 ZNF705AQ6ZN79 300 aaPredicted RBP10.78□□□□□ -0.68
RNF40-209ENST00000566703 LINC00336Q6ZUF6 198 aa10.78□□□□□ -0.68
RNF40-209ENST00000566703 LYZL2Q7Z4W2 148 aa10.78□□□□□ -0.68
RNF40-209ENST00000566703 RAB2BQ8WUD1 216 aa10.78□□□□□ -0.68
RNF40-209ENST00000566703 RBKSQ9H477 322 aa10.78□□□□□ -0.68
RNF40-209ENST00000566703 CCDC59Q9P031 241 aaKnown RBP10.78□□□□□ -0.68
RNF40-209ENST00000566703 ZFP92A6NM28 416 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 SNRPGP15A8MWD9 76 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 P0DMU3 169 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 FAM231AP0DMU4 169 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 FAM231CP0DMU5 169 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 SUPT4H1P63272 117 aaKnown RBP10.77□□□□□ -0.69
RNF40-209ENST00000566703 GAMTQ14353 236 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 SPATA31B1PQ5VZV4 182 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 DYNC2LI1Q8TCX1 351 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 SLC35E1Q96K37 410 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 SOSTQ9BQB4 213 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 KRTAP17-1Q9BYP8 105 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 CELA1Q9UNI1 258 aa10.77□□□□□ -0.69
RNF40-209ENST00000566703 DUXBA0A1W2PPF3 345 aa10.76□□□□□ -0.69
RNF40-209ENST00000566703 ZNF705FA8MVS1 300 aaPredicted RBP10.76□□□□□ -0.69
RNF40-209ENST00000566703 ZNF705DP0CH99 300 aaPredicted RBP10.76□□□□□ -0.69
RNF40-209ENST00000566703 ZNF705BP0CI00 300 aaPredicted RBP10.76□□□□□ -0.69
RNF40-209ENST00000566703 SPART-AS1P0CW21 52 aa10.76□□□□□ -0.69
RNF40-209ENST00000566703 AKR1C4P17516 323 aa10.76□□□□□ -0.69
RNF40-209ENST00000566703 PSMB3P49720 205 aa10.76□□□□□ -0.69
RNF40-209ENST00000566703 TMBIM6P55061 237 aa10.76□□□□□ -0.69
RNF40-209ENST00000566703 SAMD13Q5VXD3 122 aa10.76□□□□□ -0.69
RNF40-209ENST00000566703 FOXI2Q6ZQN5 318 aa10.76□□□□□ -0.69
RNF40-209ENST00000566703 POM121L12Q8N7R1 296 aa10.76□□□□□ -0.69
RNF40-209ENST00000566703 FAM210BQ96KR6 192 aa10.76□□□□□ -0.69
RNF40-209ENST00000566703 NDUFAF3Q9BU61 184 aa10.76□□□□□ -0.69
RNF40-209ENST00000566703 PBDC1Q9BVG4 233 aa10.76□□□□□ -0.69
RNF40-209ENST00000566703 SAV1Q9H4B6 383 aaPredicted RBP10.76□□□□□ -0.69
RNF40-209ENST00000566703 IGKV1D-37A0A075B6S9 117 aa10.75□□□□□ -0.69
RNF40-209ENST00000566703 TEX48A0A1B0GUV7 120 aa10.75□□□□□ -0.69
RNF40-209ENST00000566703 PITX3O75364 302 aa10.75□□□□□ -0.69
RNF40-209ENST00000566703 CFDP00746 253 aaPredicted RBP10.75□□□□□ -0.69
RNF40-209ENST00000566703 SLC25A6P12236 298 aa10.75□□□□□ -0.69
RNF40-209ENST00000566703 RAB11AP62491 216 aa10.75□□□□□ -0.69
RNF40-209ENST00000566703 ZNF90Q03938 601 aa10.75□□□□□ -0.69
RNF40-209ENST00000566703 OR1S1Q8NH92 325 aa10.75□□□□□ -0.69
RNF40-209ENST00000566703 LINC00052Q96N35 136 aa10.75□□□□□ -0.69
RNF40-209ENST00000566703 TRGV9Q99603 122 aa10.75□□□□□ -0.69
RNF40-209ENST00000566703 MCUBQ9NWR8 336 aa10.75□□□□□ -0.69
RNF40-209ENST00000566703 PRR13Q9NZ81 148 aa10.75□□□□□ -0.69
RNF40-209ENST00000566703 FABP12A6NFH5 140 aa10.74□□□□□ -0.69
RNF40-209ENST00000566703 ISLRO14498 428 aa10.74□□□□□ -0.69
RNF40-209ENST00000566703 SOCS3O14543 225 aa10.74□□□□□ -0.69
RNF40-209ENST00000566703 FAUP35544 74 aaKnown RBP10.74□□□□□ -0.69
RNF40-209ENST00000566703 GDF5OSQ5U4N7 250 aa10.74□□□□□ -0.69
RNF40-209ENST00000566703 WDR12Q9GZL7 423 aaKnown RBP10.74□□□□□ -0.69
RNF40-209ENST00000566703 MED6O75586 246 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 TNFSF8P32971 234 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 PAX9P55771 341 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 ZNF79Q15937 498 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 TMEM128Q5BJH2 165 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 GGNBP1Q5YKI7 109 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 ZNF767PQ75MW2 155 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 OR8I2Q8N0Y5 310 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 LRTM2Q8N967 370 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 COQ8AQ8NI60 647 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 CIB3Q96Q77 187 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms