RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CLVS1Q8IUQ0 354 aaPredicted RBP2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 OR52R1Q8NGF1 315 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 OR4D11Q8NGI4 311 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 FNDC9Q8TBE3 224 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 THEM6Q8WUY1 208 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 STARD4Q96DR4 205 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 C2orf50Q96LR7 162 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 VPS25Q9BRG1 176 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 DERL1Q9BUN8 251 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 OR2J1Q9GZK6 312 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 IMUPQ9GZP8 106 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 LRRC37A2A6NM11 1700 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 RALGAPA2Q2PPJ7 1873 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 PTPRZ1P23471 2315 aaPredicted RBP2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 XIRP2A4UGR9 3374 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 IQGAP3Q86VI3 1631 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 CABIN1Q9Y6J0 2220 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 HTTP42858 3142 aa2.13□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF646O15015 1829 aaPredicted RBP2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 KIAA1671Q9BY89 1806 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 CDH23Q9H251 3354 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 DSCAMO60469 2012 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 IGHV3-73A0A0B4J1V6 119 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 IGKV6D-41A0A0C4DH26 115 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 EFCAB10A6NFE3 127 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 J3KT08 172 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 CYB5BO43169 146 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 NDUFA2O43678 99 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF73O43830 326 aaPredicted RBP2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 SOD1P00441 154 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 IFNA10P01566 189 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 IGKV1-5P01602 117 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 IGHV1-69P01742 117 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 BPGMP07738 259 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 IGHV3-30-3P0DP02 117 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 CCL3P10147 92 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 CRHBPP24387 322 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 BLVRBP30043 206 aaPredicted RBP2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 FXYD7P58549 80 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 CCL20P78556 96 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF816Q0VGE8 651 aaPredicted RBP2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 OR8B8Q15620 311 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 LGALS9BQ3B8N2 356 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 LINC00483Q53H64 154 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 FKBP1CQ5VVH2 108 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 LGALS9CQ6DKI2 356 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 ZFAND6Q6FIF0 208 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 HRCT1Q6UXD1 115 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF705AQ6ZN79 300 aaPredicted RBP2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 C16orf47Q6ZP98 133 aaPredicted RBP2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 LCA10Q71F78 164 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 LYZL2Q7Z4W2 148 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 ANGPTL5Q86XS5 388 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF695Q8IW36 515 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 CNEP1R1Q8N9A8 125 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 OR8J3Q8NGG0 315 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 UBALD1Q8TB05 177 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 C11orf1Q9H5F2 150 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 SLC39A9Q9NUM3 307 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 KIF25-AS1Q9Y6Z4 181 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 DLEC1Q9Y238 1755 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 MBD5Q9P267 1494 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF638Q14966 1978 aaKnown RBP2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 FAM186AA6NE01 2351 aa2.12□□□□□ -2.07
HERPUD1-211ENST00000566550 KIF24Q5T7B8 1368 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 TONSLQ96HA7 1378 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 ABCC12Q96J65 1359 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 MON2Q7Z3U7 1717 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 ADGRB1O14514 1584 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 KDM3BQ7LBC6 1761 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 A0A087WX48 190 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 IGKV3D-20A0A0C4DH25 116 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 A0A1B0GW54 56 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 DHRS12A0PJE2 317 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 TAX1BP3O14907 124 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 RPS3P23396 243 aaKnown RBP eCLIP2.11□□□□□ -2.072e-6■■■■□ 19.6
HERPUD1-211ENST00000566550 S100A11P31949 105 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 CD200P41217 278 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 CCR2P41597 374 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 LPAR6P43657 344 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 EIF2B2P49770 351 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 RPL18Q07020 188 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 C2orf83Q53S99 150 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 NOXRED1Q6NXP6 359 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 AGTRAPQ6RW13 159 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 IFT20Q8IY31 132 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 LRRC18Q8N456 261 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 OR13C4Q8NGS5 318 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 STAG3L4Q8TBR4 150 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 ADAT3Q96EY9 351 aaPredicted RBP2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 BORCS8Q96FH0 119 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 ZC2HC1AQ96GY0 325 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 CARD19Q96LW7 228 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF285Q96NJ3 590 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 MND1Q9BWT6 205 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 COPZ2Q9P299 210 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 LAMTOR3Q9UHA4 124 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 NAT8Q9UHE5 227 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms