RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 STPG3Q8N7X2 389 aa14.73□□□□□ -0.05
CMTM3-211ENST00000565922 RNF125Q96EQ8 232 aa14.73□□□□□ -0.05
CMTM3-211ENST00000565922 NUDT15Q9NV35 164 aa14.73□□□□□ -0.05
CMTM3-211ENST00000565922 TRAV6A0A075B6T7 132 aa14.72□□□□□ -0.05
CMTM3-211ENST00000565922 FAM240BA0A1B0GVZ2 78 aa14.72□□□□□ -0.05
CMTM3-211ENST00000565922 MPTX1A8MV57 137 aa14.72□□□□□ -0.05
CMTM3-211ENST00000565922 LYL1P12980 280 aa14.72□□□□□ -0.05
CMTM3-211ENST00000565922 ZNF846Q147U1 533 aa14.72□□□□□ -0.05
CMTM3-211ENST00000565922 IAH1Q2TAA2 248 aaPredicted RBP14.72□□□□□ -0.05
CMTM3-211ENST00000565922 OR8G2PQ6IF36 304 aa14.72□□□□□ -0.05
CMTM3-211ENST00000565922 Q6ZWC4 215 aa14.72□□□□□ -0.05
CMTM3-211ENST00000565922 APRG1Q8IVJ8 170 aa14.72□□□□□ -0.05
CMTM3-211ENST00000565922 STXBP6Q8NFX7 210 aa14.72□□□□□ -0.05
CMTM3-211ENST00000565922 TRGV9Q99603 122 aa14.72□□□□□ -0.05
CMTM3-211ENST00000565922 TP53TG1Q9Y2A0 90 aa14.72□□□□□ -0.05
CMTM3-211ENST00000565922 CFDP00746 253 aaPredicted RBP14.71□□□□□ -0.05
CMTM3-211ENST00000565922 POLR2GP62487 172 aaKnown RBP eCLIP14.71□□□□□ -0.05
CMTM3-211ENST00000565922 C16orf54Q6UWD8 224 aa14.71□□□□□ -0.05
CMTM3-211ENST00000565922 PSENENQ9NZ42 101 aa14.71□□□□□ -0.05
CMTM3-211ENST00000565922 SNRPGP15A8MWD9 76 aa14.7□□□□□ -0.06
CMTM3-211ENST00000565922 H3BP45 60 aa14.7□□□□□ -0.06
CMTM3-211ENST00000565922 SSSCA1O60232 199 aa14.7□□□□□ -0.06
CMTM3-211ENST00000565922 H2AFB2P0C5Z0 115 aa14.7□□□□□ -0.06
CMTM3-211ENST00000565922 THAP8Q8NA92 274 aa14.7□□□□□ -0.06
CMTM3-211ENST00000565922 IL17DQ8TAD2 202 aa14.7□□□□□ -0.06
CMTM3-211ENST00000565922 ZNF431Q8TF32 576 aaPredicted RBP14.7□□□□□ -0.06
CMTM3-211ENST00000565922 GLMPQ8WWB7 406 aa14.7□□□□□ -0.06
CMTM3-211ENST00000565922 SMIM8Q96KF7 97 aa14.7□□□□□ -0.06
CMTM3-211ENST00000565922 RAB40CQ96S21 281 aa14.7□□□□□ -0.06
CMTM3-211ENST00000565922 PBDC1Q9BVG4 233 aa14.7□□□□□ -0.06
CMTM3-211ENST00000565922 BATF3Q9NR55 127 aa14.7□□□□□ -0.06
CMTM3-211ENST00000565922 IGKV1D-37A0A075B6S9 117 aa14.69□□□□□ -0.06
CMTM3-211ENST00000565922 PRSS46E5RG02 174 aa14.69□□□□□ -0.06
CMTM3-211ENST00000565922 K7EQG2 157 aa14.69□□□□□ -0.06
CMTM3-211ENST00000565922 BUB3O43684 328 aa14.69□□□□□ -0.06
CMTM3-211ENST00000565922 SCGB1D2O95969 90 aa14.69□□□□□ -0.06
CMTM3-211ENST00000565922 RPL35AP18077 110 aaKnown RBP14.69□□□□□ -0.06
CMTM3-211ENST00000565922 DEFB131AP59861 70 aa14.69□□□□□ -0.06
CMTM3-211ENST00000565922 ZNF90Q03938 601 aa14.69□□□□□ -0.06
CMTM3-211ENST00000565922 AKR1C1Q04828 323 aa14.69□□□□□ -0.06
CMTM3-211ENST00000565922 ASAH1Q13510 395 aa14.69□□□□□ -0.06
CMTM3-211ENST00000565922 ZBTB8BQ8NAP8 495 aaPredicted RBP14.69□□□□□ -0.06
CMTM3-211ENST00000565922 GSKIPQ9P0R6 139 aa14.69□□□□□ -0.06
CMTM3-211ENST00000565922 S100A7P31151 101 aa14.68□□□□□ -0.06
CMTM3-211ENST00000565922 TAS2R30P59541 319 aa14.68□□□□□ -0.06
CMTM3-211ENST00000565922 LYZP61626 148 aa14.68□□□□□ -0.06
CMTM3-211ENST00000565922 CASC10Q5T4H9 136 aa14.68□□□□□ -0.06
CMTM3-211ENST00000565922 OVOL2Q9BRP0 275 aa14.68□□□□□ -0.06
CMTM3-211ENST00000565922 NBEAL2Q6ZNJ1 2754 aa14.68□□□□□ -0.06
CMTM3-211ENST00000565922 SPRY2O43597 315 aa14.67□□□□□ -0.06
CMTM3-211ENST00000565922 UPK1BO75841 260 aa14.67□□□□□ -0.06
CMTM3-211ENST00000565922 DEFB135Q30KP9 77 aa14.67□□□□□ -0.06
CMTM3-211ENST00000565922 SIGLEC15Q6ZMC9 328 aa14.67□□□□□ -0.06
CMTM3-211ENST00000565922 ACOT7LQ6ZUV0 252 aa14.67□□□□□ -0.06
CMTM3-211ENST00000565922 ENKURQ8TC29 256 aa14.67□□□□□ -0.06
CMTM3-211ENST00000565922 DCANP1Q8TF63 244 aa14.67□□□□□ -0.06
CMTM3-211ENST00000565922 CSTL1Q9H114 145 aa14.67□□□□□ -0.06
CMTM3-211ENST00000565922 FBXL17Q9UF56 701 aa14.67□□□□□ -0.06
CMTM3-211ENST00000565922 TBC1D24Q9ULP9 559 aa14.67□□□□□ -0.06
CMTM3-211ENST00000565922 TSC22D2O75157 780 aa14.66□□□□□ -0.06
CMTM3-211ENST00000565922 ZNF124Q15973 351 aa14.66□□□□□ -0.06
CMTM3-211ENST00000565922 STHQ8IWL8 128 aa14.66□□□□□ -0.06
CMTM3-211ENST00000565922 C12orf45Q8N5I9 185 aaPredicted RBP14.66□□□□□ -0.06
CMTM3-211ENST00000565922 BPIFCQ8NFQ6 507 aa14.66□□□□□ -0.06
CMTM3-211ENST00000565922 PPP1R14BQ96C90 147 aa14.66□□□□□ -0.06
CMTM3-211ENST00000565922 SEC22CQ9BRL7 303 aa14.66□□□□□ -0.06
CMTM3-211ENST00000565922 SEPSECSQ9HD40 501 aaKnown RBP14.66□□□□□ -0.06
CMTM3-211ENST00000565922 NRN1Q9NPD7 142 aa14.66□□□□□ -0.06
CMTM3-211ENST00000565922 IGKV1OR2-108A0A075B7D4 117 aa14.65□□□□□ -0.06
CMTM3-211ENST00000565922 SNRPD3P62318 126 aaKnown RBP14.65□□□□□ -0.06
CMTM3-211ENST00000565922 OR2F1Q13607 317 aa14.65□□□□□ -0.06
CMTM3-211ENST00000565922 C1orf194Q5T5A4 169 aa14.65□□□□□ -0.06
CMTM3-211ENST00000565922 LEMD1Q68G75 181 aa14.65□□□□□ -0.06
CMTM3-211ENST00000565922 TMEM144Q7Z5S9 345 aa14.65□□□□□ -0.06
CMTM3-211ENST00000565922 FAM24BQ8N5W8 94 aa14.65□□□□□ -0.06
CMTM3-211ENST00000565922 SLC45A2Q9UMX9 530 aa14.65□□□□□ -0.06
CMTM3-211ENST00000565922 SMCO3A2RU48 225 aa14.64□□□□□ -0.07
CMTM3-211ENST00000565922 C5orf51A6NDU8 294 aa14.64□□□□□ -0.07
CMTM3-211ENST00000565922 FAM25EA8MYX2 175 aa14.64□□□□□ -0.07
CMTM3-211ENST00000565922 FNDC10F2Z333 226 aa14.64□□□□□ -0.07
CMTM3-211ENST00000565922 CCSO14618 274 aa14.64□□□□□ -0.07
CMTM3-211ENST00000565922 ZNF688P0C7X2 276 aa14.64□□□□□ -0.07
CMTM3-211ENST00000565922 DLK1P80370 383 aa14.64□□□□□ -0.07
CMTM3-211ENST00000565922 TMEM14EPQ6UXP3 125 aa14.64□□□□□ -0.07
CMTM3-211ENST00000565922 OR10P1Q8NGE3 313 aa14.64□□□□□ -0.07
CMTM3-211ENST00000565922 RNF183Q96D59 192 aa14.64□□□□□ -0.07
CMTM3-211ENST00000565922 GPN1Q9HCN4 374 aaPredicted RBP14.64□□□□□ -0.07
CMTM3-211ENST00000565922 RCL1Q9Y2P8 373 aaKnown RBP14.64□□□□□ -0.07
CMTM3-211ENST00000565922 L7N2F9 121 aa14.63□□□□□ -0.07
CMTM3-211ENST00000565922 MBPP02686 304 aaPredicted RBP14.63□□□□□ -0.07
CMTM3-211ENST00000565922 IL5P05113 134 aa14.63□□□□□ -0.07
CMTM3-211ENST00000565922 PAX9P55771 341 aa14.63□□□□□ -0.07
CMTM3-211ENST00000565922 VAMP2P63027 116 aa14.63□□□□□ -0.07
CMTM3-211ENST00000565922 GATAD1Q8WUU5 269 aa14.63□□□□□ -0.07
CMTM3-211ENST00000565922 MGAT4CQ9UBM8 478 aa14.63□□□□□ -0.07
CMTM3-211ENST00000565922 AGRNO00468 2067 aa14.62□□□□□ -0.07
CMTM3-211ENST00000565922 DNAH7Q8WXX0 4024 aa14.62□□□□□ -0.07
CMTM3-211ENST00000565922 PMS2P5A8MQ11 134 aa14.62□□□□□ -0.07
CMTM3-211ENST00000565922 METTL15P1P0C7V9 234 aa14.62□□□□□ -0.07
CMTM3-211ENST00000565922 PVALBP20472 110 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms