RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 RPP30P78346 268 aaKnown RBP4.67□□□□□ -1.66
TCF4-228ENST00000565393 SRPXP78539 464 aa4.67□□□□□ -1.66
TCF4-228ENST00000565393 OR2F1Q13607 317 aa4.67□□□□□ -1.66
TCF4-228ENST00000565393 RBMY1FQ15415 496 aaKnown RBP4.67□□□□□ -1.66
TCF4-228ENST00000565393 USF2Q15853 346 aaPredicted RBP4.67□□□□□ -1.66
TCF4-228ENST00000565393 LGALS9CQ6DKI2 356 aa4.67□□□□□ -1.66
TCF4-228ENST00000565393 SIGLEC15Q6ZMC9 328 aa4.67□□□□□ -1.66
TCF4-228ENST00000565393 TMEM170AQ8WVE7 144 aa4.67□□□□□ -1.66
TCF4-228ENST00000565393 GLMPQ8WWB7 406 aa4.67□□□□□ -1.66
TCF4-228ENST00000565393 SLC35E1Q96K37 410 aa4.67□□□□□ -1.66
TCF4-228ENST00000565393 SOSTQ9BQB4 213 aa4.67□□□□□ -1.66
TCF4-228ENST00000565393 SLIRPQ9GZT3 109 aaKnown RBP4.67□□□□□ -1.66
TCF4-228ENST00000565393 C11orf68Q9H3H3 251 aaKnown RBP4.67□□□□□ -1.66
TCF4-228ENST00000565393 NRN1Q9NPD7 142 aa4.67□□□□□ -1.66
TCF4-228ENST00000565393 XCL2Q9UBD3 114 aa4.67□□□□□ -1.66
TCF4-228ENST00000565393 TBC1D24Q9ULP9 559 aa4.67□□□□□ -1.66
TCF4-228ENST00000565393 KMT2CQ8NEZ4 4911 aaKnown RBP4.67□□□□□ -1.66
TCF4-228ENST00000565393 IGHV3OR16-12A0A075B7B8 117 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 C11orf94C9JXX5 98 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 FAM90A26D6RGX4 464 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 WRBO00258 174 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 MED6O75586 246 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 GIG44P09565 113 aaPredicted RBP4.66□□□□□ -1.66
TCF4-228ENST00000565393 IAPPP10997 89 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 INPP1P49441 399 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 FXYD7P58549 80 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 LYZP61626 148 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 ZNF90Q03938 601 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 GAMTQ14353 236 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 TMEM128Q5BJH2 165 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 OR8I2Q8N0Y5 310 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 OR4B1Q8NGF8 309 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 RNF125Q96EQ8 232 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 SLC25A21Q9BQT8 299 aaPredicted RBP4.66□□□□□ -1.66
TCF4-228ENST00000565393 C1QTNF4Q9BXJ3 329 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 MAGT1Q9H0U3 335 aa4.66□□□□□ -1.66
TCF4-228ENST00000565393 TNCP24821 2201 aa4.65□□□□□ -1.66
TCF4-228ENST00000565393 ELOA3CA0A087WX78 387 aaPredicted RBP4.65□□□□□ -1.67
TCF4-228ENST00000565393 H3BMM0 161 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 SFT2D2O95562 160 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 HOXB5P09067 269 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 C4BPBP20851 252 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 NUP62P37198 522 aaPredicted RBP4.65□□□□□ -1.67
TCF4-228ENST00000565393 EMP1P54849 157 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 TCTAP57738 103 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 SPANXN5Q5MJ07 72 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 GGNBP1Q5YKI7 109 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 OR8G2PQ6IF36 304 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 GSG1LQ6UXU4 331 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 Q8NAQ8 132 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 CSNK1G2-AS1Q8NCQ2 148 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 COQ8AQ8NI60 647 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 KRTAP17-1Q9BYP8 105 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 HRH4Q9H3N8 390 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 X6R8D5 127 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 DNAH3Q8TD57 4116 aa4.65□□□□□ -1.67
TCF4-228ENST00000565393 TRAV10A0A0B4J240 114 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 LINC00854A0A1B0GVQ3 168 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 DUXBA0A1W2PPF3 345 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 ZNF705EA8MWA4 302 aaPredicted RBP4.64□□□□□ -1.67
TCF4-228ENST00000565393 SYNGR2O43760 224 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 PITX3O75364 302 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 SLC25A6P12236 298 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 ORM2P19652 201 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 NKX2-1P43699 371 aaPredicted RBP4.64□□□□□ -1.67
TCF4-228ENST00000565393 PPP1R1AQ13522 171 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 C1orf194Q5T5A4 169 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 EBLN2Q6P2I7 272 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 Q6ZTC4 211 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 ZNF767PQ75MW2 155 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 C16orf92Q96LL3 132 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 CIB3Q96Q77 187 aaPredicted RBP4.64□□□□□ -1.67
TCF4-228ENST00000565393 RSG1Q9BU20 258 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 SLC25A22Q9H936 323 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 SEPSECSQ9HD40 501 aaKnown RBP4.64□□□□□ -1.67
TCF4-228ENST00000565393 APLNQ9ULZ1 77 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 TMED3Q9Y3Q3 217 aa4.64□□□□□ -1.67
TCF4-228ENST00000565393 IGHV4-4A0A075B6R2 117 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 IGKV1D-37A0A075B6S9 117 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 DEFB131BA0A096LNP1 70 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 SMCO3A2RU48 225 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 CFDP00746 253 aaPredicted RBP4.63□□□□□ -1.67
TCF4-228ENST00000565393 IFNA21P01568 189 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 SPART-AS1P0CW21 52 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 HLA-DRB4P13762 266 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 GATA2P23769 480 aaPredicted RBP4.63□□□□□ -1.67
TCF4-228ENST00000565393 S100A7P31151 101 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 GALR1P47211 349 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 DEFB1P60022 68 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 PRR20EP86478 221 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 PRR20CP86479 221 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 PRR20DP86480 221 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 PRR20BP86481 221 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 PRR20AP86496 221 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 PSG9Q00887 426 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 FGL1Q08830 312 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 C12orf74Q32Q52 190 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 SPANXN2Q5MJ10 180 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 GDF5OSQ5U4N7 250 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 FAM78BQ5VT40 261 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms