RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 RND2P52198 227 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 DHRS2Q13268 280 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 BAK1Q16611 211 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 C12orf74Q32Q52 190 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 NMSQ5H8A3 153 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 PSMG4Q5JS54 123 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 LINC00299Q6ZSB3 139 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 OR51S1Q8NGJ8 323 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 OR1S2Q8NGQ3 325 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 Q8WTZ3 238 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 S100ZQ8WXG8 99 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 NPIPB3Q92617 1050 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 SDHCQ99643 169 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-213ENST00000565173 PRRT1Q99946 306 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 HEYLQ9NQ87 328 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-213ENST00000565173 CACNG5Q9UF02 275 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 SCP2D1Q9UJQ7 156 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 TBC1D24Q9ULP9 559 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 CELA1Q9UNI1 258 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 TMEM56-RWDD3S4R434 201 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 IGHV4-4A0A075B6R2 117 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 TRAV10A0A0B4J240 114 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 RPS10-NUDT3A0A1W2PQS6 291 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 CRYM-AS1A6NIL9 109 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 FAM90A26D6RGX4 464 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 H3BMM0 161 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 SCGB2A1O75556 95 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 IL4P05112 153 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 SLC25A4P12235 298 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 IL7P13232 177 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 EIF2B2P49770 351 aaKnown RBP6.17□□□□□ -1.42
CAPN3-213ENST00000565173 AP2S1P53680 142 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-213ENST00000565173 SURF2Q15527 256 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-213ENST00000565173 SLC24A4Q8NFF2 622 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 RNASE11Q8TAA1 199 aaKnown RBP6.17□□□□□ -1.42
CAPN3-213ENST00000565173 NARS2Q96I59 477 aaKnown RBP6.17□□□□□ -1.42
CAPN3-213ENST00000565173 RNF126Q9BV68 326 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 SCRT1Q9BWW7 348 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 SEPSECSQ9HD40 501 aaKnown RBP6.17□□□□□ -1.42
CAPN3-213ENST00000565173 GPR132Q9UNW8 380 aa6.17□□□□□ -1.42
CAPN3-213ENST00000565173 C14orf166Q9Y224 244 aaKnown RBP6.17□□□□□ -1.42
CAPN3-213ENST00000565173 CEBPZOSA8MTT3 80 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 TOMM40O96008 361 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 RD3LP0DJH9 198 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 PSG1P11464 419 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 ZNF846Q147U1 533 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 TMEM268Q5VZI3 342 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 ZNF767PQ75MW2 155 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 CCDC32Q9BV29 185 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 WDR12Q9GZL7 423 aaKnown RBP6.16□□□□□ -1.42
CAPN3-213ENST00000565173 NRN1Q9NPD7 142 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 PRR13Q9NZ81 148 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 XCL2Q9UBD3 114 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 RYR1P21817 5038 aa6.16□□□□□ -1.42
CAPN3-213ENST00000565173 IGKV1D-37A0A075B6S9 117 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 DEFB131BA0A096LNP1 70 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 A0A1B0GVY2 172 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 CENPXA8MT69 81 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 ZNF705FA8MVS1 300 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-213ENST00000565173 AMBPP02760 352 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 ZNF705DP0CH99 300 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-213ENST00000565173 ZNF705BP0CI00 300 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-213ENST00000565173 NPY1RP25929 384 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 DEFB1P60022 68 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 SNRPD3P62318 126 aaKnown RBP6.15□□□□□ -1.42
CAPN3-213ENST00000565173 GDF5OSQ5U4N7 250 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 ETFRF1Q6IPR1 90 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 SIGLEC15Q6ZMC9 328 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 ZNF705AQ6ZN79 300 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-213ENST00000565173 OR51G1Q8NGK1 321 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 DEDD2Q8WXF8 326 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 IL22RA2Q969J5 263 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 ACY3Q96HD9 319 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 SCGB3A2Q96PL1 93 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 HSPB7Q9UBY9 170 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 U3KQ87 197 aa6.15□□□□□ -1.42
CAPN3-213ENST00000565173 NAP1L6A6NFF2 107 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 SULT1A3P0DMM9 295 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 SULT1A4P0DMN0 295 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 HLA-DRB4P13762 266 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 NKX2-1P43699 371 aaPredicted RBP6.14□□□□□ -1.43
CAPN3-213ENST00000565173 CCR6P51684 374 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 NUTF2P61970 127 aaKnown RBP6.14□□□□□ -1.43
CAPN3-213ENST00000565173 SUPT4H1P63272 117 aaKnown RBP6.14□□□□□ -1.43
CAPN3-213ENST00000565173 ZNF90Q03938 601 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 GAMTQ14353 236 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 LYZL2Q7Z4W2 148 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 TMED4Q7Z7H5 227 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 NOXA1Q86UR1 476 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 POM121L12Q8N7R1 296 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 ZNF709Q8N972 641 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 RNF125Q96EQ8 232 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 NEU1Q99519 415 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 C7orf50Q9BRJ6 194 aaKnown RBP6.14□□□□□ -1.43
CAPN3-213ENST00000565173 C1QTNF4Q9BXJ3 329 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 RBKSQ9H477 322 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 CACFD1Q9UGQ2 172 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 HLA-DRB4X5D2U9 266 aa6.14□□□□□ -1.43
CAPN3-213ENST00000565173 A0A0B4J2A0 478 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 SOCS3O14543 225 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms