RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 PRR20DP86480 221 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 PRR20BP86481 221 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 PRR20AP86496 221 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 ZNF616Q08AN1 781 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 KIAA0141Q14154 515 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-205ENST00000564899 AKR1C8PQ5T2L2 129 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 ZNF767PQ75MW2 155 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 ZNF491Q8N8L2 437 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 BPIFCQ8NFQ6 507 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 WIPF2Q8TF74 440 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-205ENST00000564899 GNB4Q9HAV0 340 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 SLC39A9Q9NUM3 307 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.56□□□□□ -1.04
SF3B3-205ENST00000564899 UMAD1C9J7I0 102 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 TOMM40O96008 361 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 MBP02144 154 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 CTSGP08311 255 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 LINC00869P0C866 280 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 RD3LP0DJH9 198 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 ADMP35318 185 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 ARL3P36405 182 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 SULT1A2P50226 295 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 PROK1P58294 105 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 YPEL3P61236 119 aaPredicted RBP8.56□□□□□ -1.04
SF3B3-205ENST00000564899 FOXL1Q12952 345 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 TCTEX1D4Q5JR98 221 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 KHDC1LQ5JSQ8 128 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 FAM209BQ5JX69 171 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 ZNF343Q6P1L6 599 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 Q6ZRG5 221 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 C1QL4Q86Z23 238 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 OR5B12Q96R08 314 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 CHRDL1Q9BU40 450 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 PLA2G2EQ9NZK7 142 aa8.56□□□□□ -1.04
SF3B3-205ENST00000564899 A0A1B0GUS0 222 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 ANKRD34BA5PLL1 514 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 PPP5D1E7EU14 171 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 RGS13O14921 159 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 YIF1AO95070 293 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 TRBV12-3P01733 135 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 LGALS1P09382 135 aaKnown RBP8.55□□□□□ -1.04
SF3B3-205ENST00000564899 PSG1P11464 419 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 RAB5CP51148 216 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 RAB2AP61019 212 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 ACOT6Q3I5F7 207 aaPredicted RBP8.55□□□□□ -1.04
SF3B3-205ENST00000564899 TMEM41BQ5BJD5 291 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 SPSB3Q6PJ21 355 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 ZNF600Q6ZNG1 722 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 Q8WTZ3 238 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 RNF141Q8WVD5 230 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 UBE2E2Q96LR5 201 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 VSIRQ9H7M9 311 aa8.55□□□□□ -1.04
SF3B3-205ENST00000564899 PEF1Q9UBV8 284 aaKnown RBP8.55□□□□□ -1.04
SF3B3-205ENST00000564899 COX7A2P2O60397 106 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 CD28P10747 220 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 M6PRP20645 277 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 LYZP61626 148 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 RELQ04864 619 aaPredicted RBP8.54□□□□□ -1.04
SF3B3-205ENST00000564899 GCSAMLQ5JQS6 135 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 C11orf44Q8N8P7 122 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 OR51G1Q8NGK1 321 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 OR10G4Q8NGN3 311 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 OR10G9Q8NGN4 311 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 OR10G7Q8NGN6 311 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 FAM213BQ8TBF2 198 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 RPRMQ9NS64 109 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 DOK5Q9P104 306 aa8.54□□□□□ -1.04
SF3B3-205ENST00000564899 IGHV3-35A0A0C4DH35 117 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 ZNF705EA8MWA4 302 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-205ENST00000564899 BMPR1BO00238 502 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 OR2C1O95371 312 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 IL4P05112 153 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 ORM2P19652 201 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 CDX1P47902 265 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-205ENST00000564899 FHITP49789 147 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 KRTAP10-3P60369 221 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 RAB14P61106 215 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 PXDC1Q5TGL8 231 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 FAM122CQ6P4D5 195 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 DPPA3Q6W0C5 159 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 OR1L4Q8NGR5 311 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 OR1B1Q8NGR6 318 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 LRRC20Q8TCA0 184 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 RNF125Q96EQ8 232 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 PBDC1Q9BVG4 233 aa8.53□□□□□ -1.04
SF3B3-205ENST00000564899 PUS1Q9Y606 427 aaKnown RBP eCLIP8.53□□□□□ -1.04
SF3B3-205ENST00000564899 NUDT19A8MXV4 375 aa8.52□□□□□ -1.05
SF3B3-205ENST00000564899 GGCTO75223 188 aaKnown RBP8.52□□□□□ -1.05
SF3B3-205ENST00000564899 HYPMO75409 117 aa8.52□□□□□ -1.05
SF3B3-205ENST00000564899 OR5G3P0C626 314 aa8.52□□□□□ -1.05
SF3B3-205ENST00000564899 CDC34P49427 236 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-205ENST00000564899 PLP1P60201 277 aa8.52□□□□□ -1.05
SF3B3-205ENST00000564899 C18orf65Q6ZTR6 163 aa8.52□□□□□ -1.05
SF3B3-205ENST00000564899 KLHL30-AS1Q8NEE0 82 aa8.52□□□□□ -1.05
SF3B3-205ENST00000564899 GATAD1Q8WUU5 269 aa8.52□□□□□ -1.05
SF3B3-205ENST00000564899 C4orf3Q8WVX3 66 aa8.52□□□□□ -1.05
SF3B3-205ENST00000564899 PCNPQ8WW12 178 aaKnown RBP8.52□□□□□ -1.05
SF3B3-205ENST00000564899 WFDC12Q8WWY7 111 aa8.52□□□□□ -1.05
SF3B3-205ENST00000564899 ZNF414Q96IQ9 312 aa8.52□□□□□ -1.05
SF3B3-205ENST00000564899 PFDN5Q99471 154 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms