RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	PXMP4	Q9Y6I8	212 aa		7.58	□□□□□ -1.2
SIN3A-205	ENST00000564778	PPP5D1	E7EU14	171 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	GGCT	O75223	188 aa	Known RBP	7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	TSPAN15	O95858	294 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	LINC00869	P0C866	280 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	PSG1	P11464	419 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	FHL3	Q13643	280 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	KHDC1L	Q5JSQ8	128 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	PXDC1	Q5TGL8	231 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	MIC13	Q5XKP0	118 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	EIF5AL1	Q6IS14	154 aa	Known RBP	7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	TMEM182	Q6ZP80	229 aa	Predicted RBP	7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	C18orf65	Q6ZTR6	163 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	NDUFA11	Q86Y39	141 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	KLHL30-AS1	Q8NEE0	82 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	BPIFC	Q8NFQ6	507 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	OR51G1	Q8NGK1	321 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	CITED1	Q99966	193 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	SLC25A32	Q9H2D1	315 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	ZFAND3	Q9H8U3	227 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	SLC39A9	Q9NUM3	307 aa		7.57	□□□□□ -1.2
SIN3A-205	ENST00000564778	WI2-2373I1.2	A0A1W2PRP0	233 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	NDUFA4	O00483	81 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	YIF1A	O95070	293 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	HSPB1	P04792	205 aa	Known RBP	7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	RD3L	P0DJH9	198 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	GATA2	P23769	480 aa	Predicted RBP	7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	ZNF616	Q08AN1	781 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	GPHB5	Q86YW7	130 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	C3orf56	Q8N813	242 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	C11orf44	Q8N8P7	122 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	TMED6	Q8WW62	240 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	TMEM190	Q8WZ59	177 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	RNF125	Q96EQ8	232 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	OR5B12	Q96R08	314 aa		7.56	□□□□□ -1.2
SIN3A-205	ENST00000564778	CMYA5	Q8N3K9	4069 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	IGHV4OR15-8	A0A075B7B6	117 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778		A0A087WW49	117 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	ANKRD34B	A5PLL1	514 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	NUDT19	A8MXV4	375 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	UMAD1	C9J7I0	102 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	LINC01619	G3V211	115 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	MB	P02144	154 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	IL4	P05112	153 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	ZP3	P21754	424 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	HOXD3	P31249	432 aa	Predicted RBP	7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	RAB5C	P51148	216 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	FFAR4	Q5NUL3	377 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	TEX261	Q6UWH6	196 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	TOMM20L	Q6UXN7	152 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778		Q6ZRG5	221 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	C8orf86	Q6ZUL3	223 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	REC114	Q7Z4M0	266 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778		Q8WTZ3	238 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	PLA2G2E	Q9NZK7	142 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	PUS1	Q9Y606	427 aa	Known RBP eCLIP	7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	RFNG	Q9Y644	331 aa		7.55	□□□□□ -1.2
SIN3A-205	ENST00000564778	TRRAP	Q9Y4A5	3859 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	WNK1	Q9H4A3	2382 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	ELOA3C	A0A087WX78	387 aa	Predicted RBP	7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778		A8MWP6	167 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	IFNA7	P01567	189 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	OR5G3	P0C626	314 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	M6PR	P20645	277 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	SULT1A2	P50226	295 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	ELL	P55199	621 aa	Predicted RBP	7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	RAB2A	P61019	212 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	IFITM2	Q01629	132 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	USF2	Q15853	346 aa	Predicted RBP	7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	RPEL1	Q2QD12	228 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	DEFB136	Q30KP8	78 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	ACOT6	Q3I5F7	207 aa	Predicted RBP	7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	TMEM41B	Q5BJD5	291 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	GCSAML	Q5JQS6	135 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	AKR1C8P	Q5T2L2	129 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	ALKAL2	Q6UX46	152 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	DPPA3	Q6W0C5	159 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	ZNF680	Q8NEM1	530 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	OR11H1	Q8NG94	326 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	OR1L4	Q8NGR5	311 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	OR1N2	Q8NGR9	330 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	GATAD1	Q8WUU5	269 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	TMEM37	Q8WXS4	190 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	RCC1L	Q96I51	464 aa	Known RBP	7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	RAX2	Q96IS3	184 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	PFDN5	Q99471	154 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	ZNF747	Q9BV97	191 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	MRPL27	Q9P0M9	148 aa	Known RBP	7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	NBEAL1	Q6ZS30	2694 aa		7.54	□□□□□ -1.2
SIN3A-205	ENST00000564778	IGHV3-35	A0A0C4DH35	117 aa		7.53	□□□□□ -1.2
SIN3A-205	ENST00000564778	SEC14L6	B5MCN3	397 aa		7.53	□□□□□ -1.2
SIN3A-205	ENST00000564778	LGALS9	O00182	355 aa		7.53	□□□□□ -1.2
SIN3A-205	ENST00000564778	RGS13	O14921	159 aa		7.53	□□□□□ -1.2
SIN3A-205	ENST00000564778	COX7A2P2	O60397	106 aa		7.53	□□□□□ -1.2
SIN3A-205	ENST00000564778	HYPM	O75409	117 aa		7.53	□□□□□ -1.2
SIN3A-205	ENST00000564778	LYZ	P61626	148 aa		7.53	□□□□□ -1.2
SIN3A-205	ENST00000564778	KLF5	Q13887	457 aa	Predicted RBP	7.53	□□□□□ -1.2
SIN3A-205	ENST00000564778	FAM106A	Q4KMX7	169 aa		7.53	□□□□□ -1.2
SIN3A-205	ENST00000564778	HIST2H2BD	Q6DRA6	164 aa		7.53	□□□□□ -1.2
SIN3A-205	ENST00000564778	UNQ9165/PRO28630	Q6UXU0	137 aa		7.53	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms