RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 CTSZQ9UBR2 303 aa12.45□□□□□ -0.42
GTF3C1-205ENST00000564747 LAMTOR2Q9Y2Q5 125 aa12.45□□□□□ -0.42
GTF3C1-205ENST00000564747 C22orf46C9J442 243 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 NDUFB3O43676 98 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 NTF3P20783 257 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 MRGPRG-AS1Q2M3A8 158 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 FAM231DQ6ZW35 169 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 SPACA3Q8IXA5 215 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 KLHDC1Q8N7A1 406 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 ZZEF1O43149 2961 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 SPTBN2O15020 2390 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 ZNF292O60281 2723 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 ENSAO43768 121 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 THBDP07204 575 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 PRR31Q5SQ13 230 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 SH3BGRL2Q9UJC5 107 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 ZFHX2Q9C0A1 2572 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-205ENST00000564747 GPR6P46095 362 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-205ENST00000564747 LRRC10Q5BKY1 277 aa12.43□□□□□ -0.42
GTF3C1-205ENST00000564747 OR1B1Q8NGR6 318 aa12.43□□□□□ -0.42
GTF3C1-205ENST00000564747 GRAMD2BQ96HH9 432 aa12.43□□□□□ -0.42
GTF3C1-205ENST00000564747 IGHV3-21A0A0B4J1V1 117 aa12.43□□□□□ -0.42
GTF3C1-205ENST00000564747 TNFRSF13BO14836 293 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-205ENST00000564747 DLX1P56177 255 aa12.43□□□□□ -0.42
GTF3C1-205ENST00000564747 SSBP4Q9BWG4 385 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-205ENST00000564747 TNFRSF19Q9NS68 423 aa12.43□□□□□ -0.42
GTF3C1-205ENST00000564747 VWC2LB2RUY7 222 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 LOXP28300 417 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 MYCNOSP40205 109 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 PCP4P48539 62 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 LINC00311Q8N616 119 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 ZNF596Q8TC21 504 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 WIPF2Q8TF74 440 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 RPH3ALQ9UNE2 315 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 C20orf202A1L168 122 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 PGPA6NDG6 321 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 HIGD1CA8MV81 97 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 SLC25A5P05141 298 aaKnown RBP12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 CAMPP49913 170 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 PRB3Q04118 309 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 VMA21Q3ZAQ7 101 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 ATOH7Q8N100 152 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 C7orf69Q9H7B7 122 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 EPDR1Q9UM22 224 aa12.42□□□□□ -0.42
GTF3C1-205ENST00000564747 NDUFB8O95169 186 aa12.41□□□□□ -0.42
GTF3C1-205ENST00000564747 DLX6P56179 175 aa12.41□□□□□ -0.42
GTF3C1-205ENST00000564747 TNXAQ16473 311 aa12.41□□□□□ -0.42
GTF3C1-205ENST00000564747 IGLC7A0M8Q6 106 aa12.41□□□□□ -0.42
GTF3C1-205ENST00000564747 H3BTX0 84 aa12.41□□□□□ -0.42
GTF3C1-205ENST00000564747 UBE2G1P62253 170 aa12.41□□□□□ -0.42
GTF3C1-205ENST00000564747 FAM71F2Q6NXP2 309 aa12.41□□□□□ -0.42
GTF3C1-205ENST00000564747 ACACAQ13085 2346 aa12.41□□□□□ -0.42
GTF3C1-205ENST00000564747 CNTFRP26992 372 aa12.41□□□□□ -0.42
GTF3C1-205ENST00000564747 RASL11AQ6T310 242 aa12.41□□□□□ -0.42
GTF3C1-205ENST00000564747 KLK10O43240 276 aa12.4□□□□□ -0.42
GTF3C1-205ENST00000564747 LEMD1Q68G75 181 aa12.4□□□□□ -0.42
GTF3C1-205ENST00000564747 LCN12Q6JVE5 192 aa12.4□□□□□ -0.42
GTF3C1-205ENST00000564747 LINC00322Q6ZN03 302 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-205ENST00000564747 C8orf31Q8N9H6 132 aa12.4□□□□□ -0.42
GTF3C1-205ENST00000564747 PERPQ96FX8 193 aa12.4□□□□□ -0.42
GTF3C1-205ENST00000564747 MRPL27Q9P0M9 148 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-205ENST00000564747 PTPRZ1P23471 2315 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-205ENST00000564747 NBEAP1P0C6P0 100 aa12.4□□□□□ -0.43
GTF3C1-205ENST00000564747 IGHV1-8P0DP01 117 aa12.4□□□□□ -0.43
GTF3C1-205ENST00000564747 HIST1H1EP10412 219 aaKnown RBP12.4□□□□□ -0.43
GTF3C1-205ENST00000564747 ZNF137PP52743 207 aa12.4□□□□□ -0.43
GTF3C1-205ENST00000564747 PMCHL1Q16048 86 aa12.4□□□□□ -0.43
GTF3C1-205ENST00000564747 CLEC7AQ9BXN2 247 aa12.4□□□□□ -0.43
GTF3C1-205ENST00000564747 GSX1Q9H4S2 264 aaPredicted RBP12.4□□□□□ -0.43
GTF3C1-205ENST00000564747 HSBP1O75506 76 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 CRYGCP07315 174 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 TSPOP30536 169 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 MC5RP33032 325 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 PTTG1IPP53801 180 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 MAJINQ3KP22 176 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 TMEM155Q4W5P6 130 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 TCF24Q7RTU0 167 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 ORAOV1Q8WV07 137 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 RNASE6Q93091 150 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 PRRG2O14669 202 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 FAM87AP0C7U9 286 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 LGALS7P47929 136 aa12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 ALKBH7Q9BT30 221 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-205ENST00000564747 HINT1P49773 126 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-205ENST00000564747 KLF12Q9Y4X4 402 aa12.38□□□□□ -0.43
GTF3C1-205ENST00000564747 PRSS33Q8NF86 280 aa12.38□□□□□ -0.43
GTF3C1-205ENST00000564747 STXBP6Q8NFX7 210 aa12.38□□□□□ -0.43
GTF3C1-205ENST00000564747 OR2D3Q8NGH3 330 aa12.38□□□□□ -0.43
GTF3C1-205ENST00000564747 GPR82Q96P67 336 aa12.38□□□□□ -0.43
GTF3C1-205ENST00000564747 MRPS16Q9Y3D3 137 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-205ENST00000564747 CD24P25063 80 aa12.37□□□□□ -0.43
GTF3C1-205ENST00000564747 ETFRF1Q6IPR1 90 aa12.37□□□□□ -0.43
GTF3C1-205ENST00000564747 CHRDL1Q9BU40 450 aa12.37□□□□□ -0.43
GTF3C1-205ENST00000564747 MLST8Q9BVC4 326 aa12.37□□□□□ -0.43
GTF3C1-205ENST00000564747 TPRP12270 2363 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-205ENST00000564747 MALRD1Q5VYJ5 2156 aa12.37□□□□□ -0.43
GTF3C1-205ENST00000564747 RPL27AP46776 148 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-205ENST00000564747 ASCL5Q7RTU5 278 aa12.37□□□□□ -0.43
GTF3C1-205ENST00000564747 TMEM116Q8NCL8 245 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms