RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 PAX8Q06710 450 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 MLANAQ16655 118 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 C10orf113Q5VZT2 155 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 FAM24BQ8N5W8 94 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 TEX29Q8N6K0 151 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 NPBQ8NG41 125 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 OR1L6Q8NGR2 347 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 NPIPB3Q92617 1050 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 MALSU1Q96EH3 234 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 EAF1Q96JC9 268 aaPredicted RBP5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 TRGV9Q99603 122 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 SEPSECSQ9HD40 501 aaKnown RBP5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 BIN3Q9NQY0 253 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 TMEM242Q9NWH2 141 aa5.9□□□□□ -1.46
MAP1LC3B-205ENST00000564638 IGKV1D-37A0A075B6S9 117 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 H7BYZ3 331 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 TGOLN2O43493 480 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 FABP1P07148 127 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 IGHV4-38-2P0DP08 117 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 TMEM11P17152 192 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 GATA2P23769 480 aaPredicted RBP5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 BRS3P32247 399 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 UBE2E1P51965 193 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 RPL23P62829 140 aaKnown RBP5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 UBE2L3P68036 154 aaKnown RBP5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 KIAA0141Q14154 515 aaPredicted RBP5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 FXYD3Q14802 87 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 SSX2Q16385 188 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 C5orf64Q2M2E5 130 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 LDLRAD2Q5SZI1 272 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 C16orf82Q7Z2V1 217 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 OR4X1Q8NH49 305 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 C11orf52Q96A22 123 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 ANAPC16Q96DE5 110 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 YPEL4Q96NS1 127 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 OR5B12Q96R08 314 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 TBX15Q96SF7 602 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 DNAJC4Q9NNZ3 241 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 TNFRSF19Q9NS68 423 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 DOK5Q9P104 306 aa5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 YTHDF2Q9Y5A9 579 aaKnown RBP5.89□□□□□ -1.47
MAP1LC3B-205ENST00000564638 ELOA3CA0A087WX78 387 aaPredicted RBP5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 MDFIC2A0A1B0GVS7 189 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 SCO2A0A1W2PP80 73 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 PSMB11A5LHX3 300 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 PPP1R2P9O14990 202 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 NDUFB4O95168 129 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 APELAP0DMC3 54 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 S100PP25815 95 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 RPS10P46783 165 aaKnown RBP5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 MFAP2P55001 183 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 SSBP2P81877 361 aaPredicted RBP5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 SCGB2A2Q13296 93 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 EBI3Q14213 229 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 ELOBQ15370 118 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 KLF17Q5JT82 389 aaPredicted RBP5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 RUSC1-AS1Q66K80 236 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 BRD3OSQ6XYD6 125 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 ZFP82Q8N141 532 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 Q8N6K4 173 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 TMEM116Q8NCL8 245 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 STXBP6Q8NFX7 210 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 OR5AU1Q8NGC0 362 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 OR51G1Q8NGK1 321 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 Q8WTZ3 238 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 ARPC1AQ92747 370 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 SLC25A33Q9BSK2 321 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 C1RLQ9NZP8 487 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 MRPL36Q9P0J6 103 aaKnown RBP5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 URGCP-MRPS24S4R325 110 aa5.88□□□□□ -1.47
MAP1LC3B-205ENST00000564638 TGIF2-C20orf24A0A0A6YYL0 155 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 A0A1W2PRE2 83 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 FCN1O00602 326 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 SCGB2A1O75556 95 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 FSHBP01225 129 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 IGHV3-48P01763 117 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 S100A6P06703 90 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 FAM106CPP0CH98 169 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 CTRB1P17538 263 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 NPPCP23582 126 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 GALR1P47211 349 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 ZNF90Q03938 601 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 CTRB2Q6GPI1 263 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 ZNF343Q6P1L6 599 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 KCNIP4Q6PIL6 250 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 C19orf35Q6ZS72 473 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 C1QL4Q86Z23 238 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 BCL6BQ8N143 479 aaPredicted RBP5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 DYNAPQ8N1N2 210 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 OR1B1Q8NGR6 318 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 C2CD4CQ8TF44 421 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 TMEM37Q8WXS4 190 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 RASL11BQ9BPW5 248 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 PAXXQ9BUH6 204 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 SLC25A2Q9BXI2 301 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 WNT10AQ9GZT5 417 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 SAV1Q9H4B6 383 aaPredicted RBP5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 ZNF355PQ9NSJ1 428 aa5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 SOX21Q9Y651 276 aaPredicted RBP5.87□□□□□ -1.47
MAP1LC3B-205ENST00000564638 PRKDCP78527 4128 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms