RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 C19orf54Q5BKX5 351 aa12.2□□□□□ -0.46
COMMD4-210ENST00000564587 C9orf152Q5JTZ5 239 aa12.2□□□□□ -0.46
COMMD4-210ENST00000564587 SPATA31B1PQ5VZV4 182 aa12.2□□□□□ -0.46
COMMD4-210ENST00000564587 Q6YL49 198 aa12.2□□□□□ -0.46
COMMD4-210ENST00000564587 FAM223AQ8IWN6 122 aa12.2□□□□□ -0.46
COMMD4-210ENST00000564587 CYB561D1Q8N8Q1 229 aa12.2□□□□□ -0.46
COMMD4-210ENST00000564587 OR51G1Q8NGK1 321 aa12.2□□□□□ -0.46
COMMD4-210ENST00000564587 Q8WTZ3 238 aa12.2□□□□□ -0.46
COMMD4-210ENST00000564587 ZNF355PQ9NSJ1 428 aa12.2□□□□□ -0.46
COMMD4-210ENST00000564587 SOX21Q9Y651 276 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-210ENST00000564587 SETD2Q9BYW2 2564 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-210ENST00000564587 C11orf94C9JXX5 98 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 OR7C2O60412 319 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 IGKV1-17P01599 117 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 RHOGP84095 191 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 GUCA2BQ16661 112 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 PATE2Q6UY27 113 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 BCL6BQ8N143 479 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-210ENST00000564587 OR1B1Q8NGR6 318 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 OR4F5Q8NH21 305 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 TMEM190Q8WZ59 177 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 EEF1AKMT3Q96AZ1 226 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 OR4F4Q96R69 305 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 NIPSNAP3BQ9BS92 247 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 VPREB3Q9UKI3 123 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 HIGD1AQ9Y241 93 aa12.19□□□□□ -0.46
COMMD4-210ENST00000564587 ZFHX3Q15911 3703 aa12.18□□□□□ -0.46
COMMD4-210ENST00000564587 TRBV7-1A0A0A6YYK4 115 aa12.18□□□□□ -0.46
COMMD4-210ENST00000564587 EIF3GO75821 320 aaKnown RBP eCLIP12.18□□□□□ -0.46
COMMD4-210ENST00000564587 ORM2P19652 201 aa12.18□□□□□ -0.46
COMMD4-210ENST00000564587 CD81P60033 236 aa12.18□□□□□ -0.46
COMMD4-210ENST00000564587 LINC00305Q7Z4B0 112 aa12.18□□□□□ -0.46
COMMD4-210ENST00000564587 CLRN3Q8NCR9 226 aa12.18□□□□□ -0.46
COMMD4-210ENST00000564587 UHRF2Q96PU4 802 aa12.18□□□□□ -0.46
COMMD4-210ENST00000564587 DOK5Q9P104 306 aa12.18□□□□□ -0.46
COMMD4-210ENST00000564587 ABCA1O95477 2261 aa12.18□□□□□ -0.46
COMMD4-210ENST00000564587 A0A1W2PRE2 83 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 LINC01548A6NM66 108 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 G3V318 75 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 NUPL2O15504 423 aaKnown RBP12.17□□□□□ -0.46
COMMD4-210ENST00000564587 CD5LO43866 347 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 OR2C1O95371 312 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 IGHV4-59P01825 116 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 ATP5G2Q06055 141 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 PNRC1Q12796 327 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-210ENST00000564587 C15orf32Q32M92 178 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 CST9LP1Q5W188 147 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 OR5AU1Q8NGC0 362 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 ZNF502Q8TBZ5 544 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 TVP23CQ96ET8 276 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 USMG5Q96IX5 58 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 FAM167A-AS1Q96KT0 104 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 PAXXQ9BUH6 204 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 SLC25A2Q9BXI2 301 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 OR51M1Q9H341 326 aa12.17□□□□□ -0.46
COMMD4-210ENST00000564587 MRPL27Q9P0M9 148 aaKnown RBP12.17□□□□□ -0.46
COMMD4-210ENST00000564587 NF1P21359 2839 aa12.16□□□□□ -0.46
COMMD4-210ENST00000564587 MDFIC2A0A1B0GVS7 189 aa12.16□□□□□ -0.46
COMMD4-210ENST00000564587 WI2-2373I1.2A0A1W2PRP0 233 aa12.16□□□□□ -0.46
COMMD4-210ENST00000564587 SH2D7A6NKC9 451 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-210ENST00000564587 SMAD7O15105 426 aaKnown RBP12.16□□□□□ -0.46
COMMD4-210ENST00000564587 CEBPGP53567 150 aa12.16□□□□□ -0.46
COMMD4-210ENST00000564587 LYZP61626 148 aa12.16□□□□□ -0.46
COMMD4-210ENST00000564587 SCGB2A2Q13296 93 aa12.16□□□□□ -0.46
COMMD4-210ENST00000564587 RHEBQ15382 184 aa12.16□□□□□ -0.46
COMMD4-210ENST00000564587 FAM90A2PQ658T7 463 aa12.16□□□□□ -0.46
COMMD4-210ENST00000564587 TMEM86BQ8N661 226 aa12.16□□□□□ -0.46
COMMD4-210ENST00000564587 RNF125Q96EQ8 232 aa12.16□□□□□ -0.46
COMMD4-210ENST00000564587 GSX1Q9H4S2 264 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-210ENST00000564587 CSPG4Q6UVK1 2322 aa12.15□□□□□ -0.46
COMMD4-210ENST00000564587 TMEM89A2RUT3 159 aa12.15□□□□□ -0.46
COMMD4-210ENST00000564587 FAM74A7A6NL05 159 aa12.15□□□□□ -0.46
COMMD4-210ENST00000564587 B4DEV8 164 aa12.15□□□□□ -0.46
COMMD4-210ENST00000564587 F8W735 103 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-210ENST00000564587 H3BQ15 152 aa12.15□□□□□ -0.46
COMMD4-210ENST00000564587 M0R036 132 aa12.15□□□□□ -0.46
COMMD4-210ENST00000564587 UBE2G2P60604 165 aa12.15□□□□□ -0.46
COMMD4-210ENST00000564587 FAM209BQ5JX69 171 aa12.15□□□□□ -0.46
COMMD4-210ENST00000564587 ZNF491Q8N8L2 437 aa12.15□□□□□ -0.46
COMMD4-210ENST00000564587 TCEAL7Q9BRU2 100 aa12.15□□□□□ -0.46
COMMD4-210ENST00000564587 TMEM14CQ9P0S9 112 aa12.15□□□□□ -0.46
COMMD4-210ENST00000564587 PUS1Q9Y606 427 aaKnown RBP eCLIP12.15□□□□□ -0.46
COMMD4-210ENST00000564587 ZNF727A8MUV8 499 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 SCO1O75880 301 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 CTSGP08311 255 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 HNF1AP20823 631 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 PPIFP30405 207 aaKnown RBP12.14□□□□□ -0.47
COMMD4-210ENST00000564587 BLCAPP62952 87 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 UBE2L3P68036 154 aaKnown RBP12.14□□□□□ -0.47
COMMD4-210ENST00000564587 ATRAIDQ6UW56 229 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 ZNF600Q6ZNG1 722 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 CIARTQ8N365 385 aaPredicted RBP12.14□□□□□ -0.47
COMMD4-210ENST00000564587 ZNF503Q96F45 646 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 SLC25A39Q9BZJ4 359 aaPredicted RBP12.14□□□□□ -0.47
COMMD4-210ENST00000564587 PRSS22Q9GZN4 317 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 NPFFR1Q9GZQ6 430 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 NAT8Q9UHE5 227 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 PRELID1Q9Y255 219 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 CELSR1Q9NYQ6 3014 aa12.14□□□□□ -0.47
COMMD4-210ENST00000564587 A0A0G2JLM5 398 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms