RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 VCX2Q9H322 139 aa3.82□□□□□ -1.8
CAPN3-212ENST00000564503 CST9LQ9H4G1 147 aa3.82□□□□□ -1.8
CAPN3-212ENST00000564503 FSCN3Q9NQT6 498 aa3.82□□□□□ -1.8
CAPN3-212ENST00000564503 TMEM14BQ9NUH8 114 aa3.82□□□□□ -1.8
CAPN3-212ENST00000564503 GNG12Q9UBI6 72 aa3.82□□□□□ -1.8
CAPN3-212ENST00000564503 PRNDQ9UKY0 176 aa3.82□□□□□ -1.8
CAPN3-212ENST00000564503 SOX21Q9Y651 276 aaPredicted RBP3.82□□□□□ -1.8
CAPN3-212ENST00000564503 CNTRLQ7Z7A1 2325 aa3.82□□□□□ -1.8
CAPN3-212ENST00000564503 MED13Q9UHV7 2174 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 MBD3L5A6NJ08 208 aaPredicted RBP3.81□□□□□ -1.8
CAPN3-212ENST00000564503 GGTLC3B5MD39 225 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 C21orf140B9A014 251 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 K7ERU9 68 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 UPK2O00526 184 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 PEX7O00628 323 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 CRXO43186 299 aaPredicted RBP3.81□□□□□ -1.8
CAPN3-212ENST00000564503 CD5LO43866 347 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 HLA-DRB1P01911 266 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 OR5AL1P0C617 328 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 HIST1H1EP10412 219 aaKnown RBP3.81□□□□□ -1.8
CAPN3-212ENST00000564503 MAGEA5P43359 124 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 CXCL12P48061 93 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 CAMPP49913 170 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 MFAP2P55001 183 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 TIRAPP58753 221 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 LINC00205P59089 165 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 PRCDQ00LT1 54 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 HIST1H1AQ02539 215 aaPredicted RBP3.81□□□□□ -1.8
CAPN3-212ENST00000564503 LTC4SQ16873 150 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 ALKBH6Q3KRA9 238 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 BVES-AS1Q5T3Y7 98 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 SPINK14Q6IE38 97 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 OR4A47Q6IF82 309 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 LCN12Q6JVE5 192 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 SLC25A34Q6PIV7 304 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 ZNF826PQ6ZT77 177 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 Q6ZVH6 145 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 DEFB125Q8N687 156 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 GCSAMQ8N6F7 178 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 TMEM251Q8N6I4 163 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 NUP35Q8NFH5 326 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 OR1L8Q8NGR8 309 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 RFESDQ8TAC1 157 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 CT55Q8WUE5 264 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 SNRNP40Q96DI7 357 aaKnown RBP3.81□□□□□ -1.8
CAPN3-212ENST00000564503 SLC25A33Q9BSK2 321 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 FAM234AQ9H0X4 552 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 IFI27L2Q9H2X8 130 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 IDI2-AS1Q9NZ38 188 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 ZNF492Q9P255 531 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 CLCF1Q9UBD9 225 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 PEF1Q9UBV8 284 aaKnown RBP3.81□□□□□ -1.8
CAPN3-212ENST00000564503 ZNF257Q9Y2Q1 563 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 OR51B2Q9Y5P1 312 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 R4GN57 208 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 PRUNE2Q8WUY3 3088 aa3.81□□□□□ -1.8
CAPN3-212ENST00000564503 EYSQ5T1H1 3165 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 A0A1B0GXF2 115 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 PSMB11A5LHX3 300 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 CBY3A6NI87 242 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 A8MWL6 223 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 SYS1-DBNDD2H3BUS1 97 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 TIMM8AO60220 97 aaPredicted RBP3.8□□□□□ -1.8
CAPN3-212ENST00000564503 LEPROTL1O95214 131 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 PSG1P11464 419 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 PRDX2P32119 198 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 MPV17P39210 176 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 CA7P43166 264 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 LOXL3P58215 753 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 RPL8P62917 257 aaKnown RBP3.8□□□□□ -1.8
CAPN3-212ENST00000564503 UBE2L3P68036 154 aaKnown RBP3.8□□□□□ -1.8
CAPN3-212ENST00000564503 EDDM3AQ14507 147 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 TMEM30BQ3MIR4 351 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 MPV17L2Q567V2 206 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 OCIAD2Q56VL3 154 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 RPL39P5Q59GN2 51 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 LDLRAD2Q5SZI1 272 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 FAM120AOSQ5T036 256 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 GDF5OSQ5U4N7 250 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 SUMO4Q6EEV6 95 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 PRR27Q6MZM9 219 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 FAM71F2Q6NXP2 309 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 SPATA12Q7Z6I5 190 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 ZNF329Q86UD4 541 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 VKORC1L1Q8N0U8 176 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 CD177Q8N6Q3 437 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 TPRX1Q8N7U7 411 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 OR2T6Q8NHC8 308 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 KLF14Q8TD94 323 aaPredicted RBP3.8□□□□□ -1.8
CAPN3-212ENST00000564503 LRRC29Q8WV35 223 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 CACNG8Q8WXS5 425 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 URB1-AS1Q96HZ7 61 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 FAM167A-AS1Q96KT0 104 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 SRSF8Q9BRL6 282 aaKnown RBP3.8□□□□□ -1.8
CAPN3-212ENST00000564503 DCTN5Q9BTE1 182 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 PAXXQ9BUH6 204 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 SLC25A2Q9BXI2 301 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 MAP1LC3CQ9BXW4 147 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 SCRT2Q9NQ03 307 aa3.8□□□□□ -1.8
CAPN3-212ENST00000564503 CLEC5AQ9NY25 188 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms