RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 GRAMD2BQ96HH9 432 aa12.61□□□□□ -0.39
RNF40-206ENST00000564260 MLXQ9UH92 298 aa12.61□□□□□ -0.39
RNF40-206ENST00000564260 CHEK1O14757 476 aa12.6□□□□□ -0.39
RNF40-206ENST00000564260 TSPAN4O14817 238 aa12.6□□□□□ -0.39
RNF40-206ENST00000564260 MPC2O95563 127 aa12.6□□□□□ -0.39
RNF40-206ENST00000564260 IL4P05112 153 aa12.6□□□□□ -0.39
RNF40-206ENST00000564260 EIF2B2P49770 351 aaKnown RBP12.6□□□□□ -0.39
RNF40-206ENST00000564260 TEPPQ6URK8 271 aa12.6□□□□□ -0.39
RNF40-206ENST00000564260 BTNL8Q6UX41 500 aa12.6□□□□□ -0.39
RNF40-206ENST00000564260 GTSCR1Q86UQ5 136 aa12.6□□□□□ -0.39
RNF40-206ENST00000564260 RNF125Q96EQ8 232 aa12.6□□□□□ -0.39
RNF40-206ENST00000564260 RHPN1-AS1Q9BWJ2 59 aa12.6□□□□□ -0.39
RNF40-206ENST00000564260 RNF24Q9Y225 148 aa12.6□□□□□ -0.39
RNF40-206ENST00000564260 IGKV1OR2-108A0A075B7D4 117 aa12.59□□□□□ -0.39
RNF40-206ENST00000564260 TRAV2A0A0B4J234 112 aa12.59□□□□□ -0.39
RNF40-206ENST00000564260 WI2-2373I1.2A0A1W2PRP0 233 aa12.59□□□□□ -0.39
RNF40-206ENST00000564260 HNRNPCP07910 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
RNF40-206ENST00000564260 GIPP09681 153 aaPredicted RBP12.59□□□□□ -0.39
RNF40-206ENST00000564260 SLC38A11Q08AI6 406 aa12.59□□□□□ -0.39
RNF40-206ENST00000564260 RAB31Q13636 194 aa12.59□□□□□ -0.39
RNF40-206ENST00000564260 VWC2Q2TAL6 325 aa12.59□□□□□ -0.39
RNF40-206ENST00000564260 PXDC1Q5TGL8 231 aa12.59□□□□□ -0.39
RNF40-206ENST00000564260 BPIFCQ8NFQ6 507 aa12.59□□□□□ -0.39
RNF40-206ENST00000564260 FAM110AQ9BQ89 295 aa12.59□□□□□ -0.39
RNF40-206ENST00000564260 RABAC1Q9UI14 185 aa12.59□□□□□ -0.39
RNF40-206ENST00000564260 LSM4Q9Y4Z0 139 aaKnown RBP12.59□□□□□ -0.39
RNF40-206ENST00000564260 U3KQE9 123 aa12.59□□□□□ -0.39
RNF40-206ENST00000564260 A8MZ25 164 aa12.58□□□□□ -0.4
RNF40-206ENST00000564260 MPDU1O75352 247 aa12.58□□□□□ -0.4
RNF40-206ENST00000564260 LYL1P12980 280 aa12.58□□□□□ -0.4
RNF40-206ENST00000564260 AP2S1P53680 142 aaPredicted RBP12.58□□□□□ -0.4
RNF40-206ENST00000564260 RAP2BP61225 183 aa12.58□□□□□ -0.4
RNF40-206ENST00000564260 PAFAH1B2P68402 229 aa12.58□□□□□ -0.4
RNF40-206ENST00000564260 ZNF546Q86UE3 836 aa12.58□□□□□ -0.4
RNF40-206ENST00000564260 TMEM61Q8N0U2 210 aa12.58□□□□□ -0.4
RNF40-206ENST00000564260 CHAC2Q8WUX2 184 aa12.58□□□□□ -0.4
RNF40-206ENST00000564260 UQCC1Q9NVA1 299 aa12.58□□□□□ -0.4
RNF40-206ENST00000564260 SMCO3A2RU48 225 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 HELTA6NFD8 242 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 FAM24AA6NFZ4 105 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 K7EIL1 84 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 CXCL3P19876 107 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 CMC4P56277 68 aaPredicted RBP12.57□□□□□ -0.4
RNF40-206ENST00000564260 PLP1P60201 277 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 ZNF90Q03938 601 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 FCN2Q15485 313 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 LRRC37A5PQ49AS3 106 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 C1orf194Q5T5A4 169 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 HAPLN4Q86UW8 402 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 LILRB2Q8N423 598 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 THAP6Q8TBB0 222 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 MRAPQ8TCY5 172 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 TMEM147Q9BVK8 224 aa12.57□□□□□ -0.4
RNF40-206ENST00000564260 IGSF23A1L1A6 192 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 ZNF785A8K8V0 405 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 H0YIZ8 118 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 CST7O76096 145 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 EWSR1Q01844 656 aaKnown RBP eCLIP12.56□□□□□ -0.4
RNF40-206ENST00000564260 ARL16Q0P5N6 197 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 USF2Q15853 346 aaPredicted RBP12.56□□□□□ -0.4
RNF40-206ENST00000564260 FAM90A2PQ658T7 463 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 CYP2G1PQ6ZSU1 146 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 OR11H7Q8NGC8 314 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 PRR25Q96S07 402 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 OR5AC2Q9NZP5 309 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 FBXL17Q9UF56 701 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 SMAD5-AS1Q9Y6J3 95 aa12.56□□□□□ -0.4
RNF40-206ENST00000564260 IGHV3OR16-8A0A075B7F1 116 aa12.55□□□□□ -0.4
RNF40-206ENST00000564260 ZNF207O43670 478 aaKnown RBP12.55□□□□□ -0.4
RNF40-206ENST00000564260 CCNKO75909 580 aa12.55□□□□□ -0.4
RNF40-206ENST00000564260 EDN2P20800 178 aa12.55□□□□□ -0.4
RNF40-206ENST00000564260 ST8SIA2Q92186 375 aa12.55□□□□□ -0.4
RNF40-206ENST00000564260 RNF2Q99496 336 aa12.55□□□□□ -0.4
RNF40-206ENST00000564260 RNF126Q9BV68 326 aa12.55□□□□□ -0.4
RNF40-206ENST00000564260 WDR83OSQ9Y284 106 aa12.55□□□□□ -0.4
RNF40-206ENST00000564260 IZUMO1RA6ND01 250 aa12.54□□□□□ -0.4
RNF40-206ENST00000564260 BUB3O43684 328 aa12.54□□□□□ -0.4
RNF40-206ENST00000564260 GUCA2BQ16661 112 aa12.54□□□□□ -0.4
RNF40-206ENST00000564260 SAMD13Q5VXD3 122 aa12.54□□□□□ -0.4
RNF40-206ENST00000564260 C16orf54Q6UWD8 224 aa12.54□□□□□ -0.4
RNF40-206ENST00000564260 TMEM217Q8N7C4 229 aa12.54□□□□□ -0.4
RNF40-206ENST00000564260 WDR89Q96FK6 387 aaPredicted RBP12.54□□□□□ -0.4
RNF40-206ENST00000564260 SEPSECSQ9HD40 501 aaKnown RBP12.54□□□□□ -0.4
RNF40-206ENST00000564260 MBD2Q9UBB5 411 aa12.54□□□□□ -0.4
RNF40-206ENST00000564260 SORL1Q92673 2214 aa12.54□□□□□ -0.4
RNF40-206ENST00000564260 DFFBO76075 338 aa12.53□□□□□ -0.4
RNF40-206ENST00000564260 LYZP61626 148 aa12.53□□□□□ -0.4
RNF40-206ENST00000564260 TCF24Q7RTU0 167 aa12.53□□□□□ -0.4
RNF40-206ENST00000564260 Q8N1Y9 231 aa12.53□□□□□ -0.4
RNF40-206ENST00000564260 GPR82Q96P67 336 aa12.53□□□□□ -0.4
RNF40-206ENST00000564260 KCNIP2Q9NS61 270 aa12.53□□□□□ -0.4
RNF40-206ENST00000564260 ELOA3CA0A087WX78 387 aaPredicted RBP12.52□□□□□ -0.41
RNF40-206ENST00000564260 AGPAT2O15120 278 aa12.52□□□□□ -0.41
RNF40-206ENST00000564260 PRB2P02812 416 aaPredicted RBP12.52□□□□□ -0.41
RNF40-206ENST00000564260 RPL12P30050 165 aaKnown RBP12.52□□□□□ -0.41
RNF40-206ENST00000564260 CD81P60033 236 aa12.52□□□□□ -0.41
RNF40-206ENST00000564260 OR5C1Q8NGR4 320 aa12.52□□□□□ -0.41
RNF40-206ENST00000564260 GLMPQ8WWB7 406 aa12.52□□□□□ -0.41
RNF40-206ENST00000564260 NEURL2Q9BR09 285 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms