RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TRAV10A0A0B4J240 114 aa17.23■□□□□ 0.35
NME3-206ENST00000564252 GSTZ1O43708 216 aaPredicted RBP17.23■□□□□ 0.35
NME3-206ENST00000564252 IFNA10P01566 189 aa17.23■□□□□ 0.35
NME3-206ENST00000564252 PSG1P11464 419 aa17.23■□□□□ 0.35
NME3-206ENST00000564252 SNRPD3P62318 126 aaKnown RBP17.23■□□□□ 0.35
NME3-206ENST00000564252 DYNC2LI1Q8TCX1 351 aa17.23■□□□□ 0.35
NME3-206ENST00000564252 CELA1Q9UNI1 258 aa17.23■□□□□ 0.35
NME3-206ENST00000564252 U3KQ87 197 aa17.23■□□□□ 0.35
NME3-206ENST00000564252 CCR6P51684 374 aa17.22■□□□□ 0.35
NME3-206ENST00000564252 SUPT4H1P63272 117 aaKnown RBP17.22■□□□□ 0.35
NME3-206ENST00000564252 LYZL2Q7Z4W2 148 aa17.22■□□□□ 0.35
NME3-206ENST00000564252 OR51G1Q8NGK1 321 aa17.22■□□□□ 0.35
NME3-206ENST00000564252 DTD1Q8TEA8 209 aa17.22■□□□□ 0.35
NME3-206ENST00000564252 SCP2D1Q9UJQ7 156 aa17.22■□□□□ 0.35
NME3-206ENST00000564252 A0A0B4J2A0 478 aa17.21■□□□□ 0.35
NME3-206ENST00000564252 H3BMM0 161 aa17.21■□□□□ 0.35
NME3-206ENST00000564252 SMCO1Q147U7 214 aa17.21■□□□□ 0.35
NME3-206ENST00000564252 LGI3Q8N145 548 aa17.21■□□□□ 0.35
NME3-206ENST00000564252 RBKSQ9H477 322 aa17.21■□□□□ 0.35
NME3-206ENST00000564252 SHPKQ9UHJ6 478 aa17.21■□□□□ 0.35
NME3-206ENST00000564252 IGHV4-4A0A075B6R2 117 aa17.2■□□□□ 0.34
NME3-206ENST00000564252 NUTF2P61970 127 aaKnown RBP17.2■□□□□ 0.34
NME3-206ENST00000564252 RAB2BQ8WUD1 216 aa17.2■□□□□ 0.34
NME3-206ENST00000564252 RNF125Q96EQ8 232 aa17.2■□□□□ 0.34
NME3-206ENST00000564252 SCGB3A2Q96PL1 93 aa17.2■□□□□ 0.34
NME3-206ENST00000564252 C1QTNF4Q9BXJ3 329 aa17.2■□□□□ 0.34
NME3-206ENST00000564252 XCL2Q9UBD3 114 aa17.2■□□□□ 0.34
NME3-206ENST00000564252 DNAH17Q9UFH2 4485 aa17.2■□□□□ 0.34
NME3-206ENST00000564252 AKR1C4P17516 323 aa17.19■□□□□ 0.34
NME3-206ENST00000564252 CENPSQ8N2Z9 138 aa17.19■□□□□ 0.34
NME3-206ENST00000564252 RSL24D1Q9UHA3 163 aaKnown RBP17.19■□□□□ 0.34
NME3-206ENST00000564252 HLA-DRB4P13762 266 aa17.18■□□□□ 0.34
NME3-206ENST00000564252 NKX2-1P43699 371 aaPredicted RBP17.18■□□□□ 0.34
NME3-206ENST00000564252 KLF9Q13886 244 aaPredicted RBP17.18■□□□□ 0.34
NME3-206ENST00000564252 C12orf74Q32Q52 190 aa17.18■□□□□ 0.34
NME3-206ENST00000564252 SOSTQ9BQB4 213 aa17.18■□□□□ 0.34
NME3-206ENST00000564252 RNF126Q9BV68 326 aa17.18■□□□□ 0.34
NME3-206ENST00000564252 PBDC1Q9BVG4 233 aa17.18■□□□□ 0.34
NME3-206ENST00000564252 MCUBQ9NWR8 336 aa17.18■□□□□ 0.34
NME3-206ENST00000564252 HLA-DRB4X5D2U9 266 aa17.18■□□□□ 0.34
NME3-206ENST00000564252 IGKV1D-37A0A075B6S9 117 aa17.17■□□□□ 0.34
NME3-206ENST00000564252 GPX4P36969 197 aaPredicted RBP17.17■□□□□ 0.34
NME3-206ENST00000564252 NUP62P37198 522 aaPredicted RBP17.17■□□□□ 0.34
NME3-206ENST00000564252 TMBIM6P55061 237 aa17.17■□□□□ 0.34
NME3-206ENST00000564252 GAMTQ14353 236 aa17.17■□□□□ 0.34
NME3-206ENST00000564252 OR8G2PQ6IF36 304 aa17.17■□□□□ 0.34
NME3-206ENST00000564252 BCL7BQ9BQE9 202 aa17.17■□□□□ 0.34
NME3-206ENST00000564252 ATP5IP56385 69 aaPredicted RBP17.16■□□□□ 0.34
NME3-206ENST00000564252 ZNF90Q03938 601 aa17.16■□□□□ 0.34
NME3-206ENST00000564252 GDF5OSQ5U4N7 250 aa17.16■□□□□ 0.34
NME3-206ENST00000564252 ZNF767PQ75MW2 155 aa17.16■□□□□ 0.34
NME3-206ENST00000564252 KRTAP17-1Q9BYP8 105 aa17.16■□□□□ 0.34
NME3-206ENST00000564252 SLIRPQ9GZT3 109 aaKnown RBP17.16■□□□□ 0.34
NME3-206ENST00000564252 ZFP92A6NM28 416 aa17.15■□□□□ 0.34
NME3-206ENST00000564252 AMBPP02760 352 aa17.15■□□□□ 0.34
NME3-206ENST00000564252 ANXA3P12429 323 aa17.15■□□□□ 0.34
NME3-206ENST00000564252 DEFB1P60022 68 aa17.15■□□□□ 0.34
NME3-206ENST00000564252 SRPXP78539 464 aa17.15■□□□□ 0.34
NME3-206ENST00000564252 WDR12Q9GZL7 423 aaKnown RBP17.15■□□□□ 0.34
NME3-206ENST00000564252 DEFB131BA0A096LNP1 70 aa17.14■□□□□ 0.33
NME3-206ENST00000564252 TNFSF8P32971 234 aa17.14■□□□□ 0.33
NME3-206ENST00000564252 ZNF705AQ6ZN79 300 aaPredicted RBP17.14■□□□□ 0.33
NME3-206ENST00000564252 OR1S1Q8NH92 325 aa17.14■□□□□ 0.33
NME3-206ENST00000564252 SLC35E1Q96K37 410 aa17.14■□□□□ 0.33
NME3-206ENST00000564252 PFDN2Q9UHV9 154 aa17.14■□□□□ 0.33
NME3-206ENST00000564252 PKHD1P08F94 4074 aa17.13■□□□□ 0.33
NME3-206ENST00000564252 FABP12A6NFH5 140 aa17.13■□□□□ 0.33
NME3-206ENST00000564252 PITX3O75364 302 aa17.13■□□□□ 0.33
NME3-206ENST00000564252 NEU1Q99519 415 aa17.13■□□□□ 0.33
NME3-206ENST00000564252 SAV1Q9H4B6 383 aaPredicted RBP17.13■□□□□ 0.33
NME3-206ENST00000564252 ZNF705FA8MVS1 300 aaPredicted RBP17.12■□□□□ 0.33
NME3-206ENST00000564252 SOCS3O14543 225 aa17.12■□□□□ 0.33
NME3-206ENST00000564252 ZNF705DP0CH99 300 aaPredicted RBP17.12■□□□□ 0.33
NME3-206ENST00000564252 ZNF705BP0CI00 300 aaPredicted RBP17.12■□□□□ 0.33
NME3-206ENST00000564252 LYZP61626 148 aa17.12■□□□□ 0.33
NME3-206ENST00000564252 SCRT1Q9BWW7 348 aa17.12■□□□□ 0.33
NME3-206ENST00000564252 DUXBA0A1W2PPF3 345 aa17.11■□□□□ 0.33
NME3-206ENST00000564252 IGKV3-20P01619 116 aa17.11■□□□□ 0.33
NME3-206ENST00000564252 PSMB3P49720 205 aa17.11■□□□□ 0.33
NME3-206ENST00000564252 C1orf194Q5T5A4 169 aa17.11■□□□□ 0.33
NME3-206ENST00000564252 FOXI2Q6ZQN5 318 aa17.11■□□□□ 0.33
NME3-206ENST00000564252 LINC00052Q96N35 136 aa17.11■□□□□ 0.33
NME3-206ENST00000564252 H3BMQ9 156 aa17.1■□□□□ 0.33
NME3-206ENST00000564252 FABP1P07148 127 aa17.1■□□□□ 0.33
NME3-206ENST00000564252 IAPPP10997 89 aa17.1■□□□□ 0.33
NME3-206ENST00000564252 ID1P41134 155 aa17.1■□□□□ 0.33
NME3-206ENST00000564252 FXYD7P58549 80 aa17.1■□□□□ 0.33
NME3-206ENST00000564252 ZNF709Q8N972 641 aa17.1■□□□□ 0.33
NME3-206ENST00000564252 TRIM63Q969Q1 353 aa17.1■□□□□ 0.33
NME3-206ENST00000564252 CLUHP3Q96NS8 147 aa17.1■□□□□ 0.33
NME3-206ENST00000564252 TRGV9Q99603 122 aa17.1■□□□□ 0.33
NME3-206ENST00000564252 IGKV1OR2-108A0A075B7D4 117 aa17.09■□□□□ 0.33
NME3-206ENST00000564252 PIGBOS1A0A0B4J2F0 54 aa17.09■□□□□ 0.33
NME3-206ENST00000564252 SNRPGP15A8MWD9 76 aa17.09■□□□□ 0.33
NME3-206ENST00000564252 OR2F1Q13607 317 aa17.09■□□□□ 0.33
NME3-206ENST00000564252 TMEM128Q5BJH2 165 aa17.09■□□□□ 0.33
NME3-206ENST00000564252 GSG1LQ6UXU4 331 aa17.09■□□□□ 0.33
NME3-206ENST00000564252 TMED4Q7Z7H5 227 aa17.09■□□□□ 0.33
NME3-206ENST00000564252 THAP8Q8NA92 274 aa17.09■□□□□ 0.33
NME3-206ENST00000564252 MCFD2Q8NI22 146 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms