RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 KIR2DL5AQ8N109 375 aa22.71■■□□□ 1.23
CMTM4-204ENST00000563952 KIR2DL5BQ8NHK3 375 aa22.71■■□□□ 1.23
CMTM4-204ENST00000563952 PBDC1Q9BVG4 233 aa22.71■■□□□ 1.23
CMTM4-204ENST00000563952 IGKV1D-37A0A075B6S9 117 aa22.7■■□□□ 1.22
CMTM4-204ENST00000563952 TCRBP04435 133 aa22.7■■□□□ 1.22
CMTM4-204ENST00000563952 NKX2-1P43699 371 aaPredicted RBP22.7■■□□□ 1.22
CMTM4-204ENST00000563952 EIF2B2P49770 351 aaKnown RBP22.7■■□□□ 1.22
CMTM4-204ENST00000563952 ID3Q02535 119 aa22.7■■□□□ 1.22
CMTM4-204ENST00000563952 LEMD1Q68G75 181 aa22.7■■□□□ 1.22
CMTM4-204ENST00000563952 C16orf54Q6UWD8 224 aa22.7■■□□□ 1.22
CMTM4-204ENST00000563952 Q6ZWC4 215 aa22.7■■□□□ 1.22
CMTM4-204ENST00000563952 OR4D5Q8NGN0 318 aa22.7■■□□□ 1.22
CMTM4-204ENST00000563952 RNF125Q96EQ8 232 aa22.7■■□□□ 1.22
CMTM4-204ENST00000563952 STRAPQ9Y3F4 350 aaKnown RBP22.7■■□□□ 1.22
CMTM4-204ENST00000563952 TRAV6A0A075B6T7 132 aa22.69■■□□□ 1.22
CMTM4-204ENST00000563952 HELTA6NFD8 242 aa22.69■■□□□ 1.22
CMTM4-204ENST00000563952 A6NHS1 94 aa22.69■■□□□ 1.22
CMTM4-204ENST00000563952 LINC00299Q6ZSB3 139 aa22.69■■□□□ 1.22
CMTM4-204ENST00000563952 MITD1Q8WV92 249 aa22.69■■□□□ 1.22
CMTM4-204ENST00000563952 GLMPQ8WWB7 406 aa22.69■■□□□ 1.22
CMTM4-204ENST00000563952 K7EQG2 157 aa22.68■■□□□ 1.22
CMTM4-204ENST00000563952 SPRY2O43597 315 aa22.68■■□□□ 1.22
CMTM4-204ENST00000563952 SSSCA1O60232 199 aa22.68■■□□□ 1.22
CMTM4-204ENST00000563952 FABP1P07148 127 aa22.68■■□□□ 1.22
CMTM4-204ENST00000563952 S100ZQ8WXG8 99 aa22.68■■□□□ 1.22
CMTM4-204ENST00000563952 NUDT15Q9NV35 164 aa22.68■■□□□ 1.22
CMTM4-204ENST00000563952 SCGB1D2O95969 90 aa22.67■■□□□ 1.22
CMTM4-204ENST00000563952 OR2F1Q13607 317 aa22.67■■□□□ 1.22
CMTM4-204ENST00000563952 IAH1Q2TAA2 248 aaPredicted RBP22.67■■□□□ 1.22
CMTM4-204ENST00000563952 PSENENQ9NZ42 101 aa22.67■■□□□ 1.22
CMTM4-204ENST00000563952 PRSS46E5RG02 174 aa22.66■■□□□ 1.22
CMTM4-204ENST00000563952 GSKIPQ9P0R6 139 aa22.66■■□□□ 1.22
CMTM4-204ENST00000563952 TP53TG1Q9Y2A0 90 aa22.66■■□□□ 1.22
CMTM4-204ENST00000563952 BUB3O43684 328 aa22.65■■□□□ 1.22
CMTM4-204ENST00000563952 ZNF688P0C7X2 276 aa22.65■■□□□ 1.22
CMTM4-204ENST00000563952 AP2S1P53680 142 aaPredicted RBP22.65■■□□□ 1.22
CMTM4-204ENST00000563952 LYZP61626 148 aa22.65■■□□□ 1.22
CMTM4-204ENST00000563952 DCANP1Q8TF63 244 aa22.65■■□□□ 1.22
CMTM4-204ENST00000563952 TRGV9Q99603 122 aa22.65■■□□□ 1.22
CMTM4-204ENST00000563952 CSTL1Q9H114 145 aa22.65■■□□□ 1.22
CMTM4-204ENST00000563952 IGKV1OR2-108A0A075B7D4 117 aa22.64■■□□□ 1.21
CMTM4-204ENST00000563952 THAP8Q8NA92 274 aa22.64■■□□□ 1.21
CMTM4-204ENST00000563952 ZBTB8BQ8NAP8 495 aaPredicted RBP22.64■■□□□ 1.21
CMTM4-204ENST00000563952 SNRPGP15A8MWD9 76 aa22.63■■□□□ 1.21
CMTM4-204ENST00000563952 AKR1C1Q04828 323 aa22.63■■□□□ 1.21
CMTM4-204ENST00000563952 OR8G2PQ6IF36 304 aa22.63■■□□□ 1.21
CMTM4-204ENST00000563952 SIGLEC15Q6ZMC9 328 aa22.63■■□□□ 1.21
CMTM4-204ENST00000563952 RNF183Q96D59 192 aa22.63■■□□□ 1.21
CMTM4-204ENST00000563952 SEC22CQ9BRL7 303 aa22.63■■□□□ 1.21
CMTM4-204ENST00000563952 PFDN2Q9UHV9 154 aa22.63■■□□□ 1.21
CMTM4-204ENST00000563952 CCSO14618 274 aa22.62■■□□□ 1.21
CMTM4-204ENST00000563952 NUP62P37198 522 aaPredicted RBP22.62■■□□□ 1.21
CMTM4-204ENST00000563952 ACOT7LQ6ZUV0 252 aa22.62■■□□□ 1.21
CMTM4-204ENST00000563952 IL17DQ8TAD2 202 aa22.62■■□□□ 1.21
CMTM4-204ENST00000563952 SMIM8Q96KF7 97 aa22.62■■□□□ 1.21
CMTM4-204ENST00000563952 TBC1D24Q9ULP9 559 aa22.62■■□□□ 1.21
CMTM4-204ENST00000563952 FAM240BA0A1B0GVZ2 78 aa22.61■■□□□ 1.21
CMTM4-204ENST00000563952 H2AFB2P0C5Z0 115 aa22.61■■□□□ 1.21
CMTM4-204ENST00000563952 MZT2BQ6NZ67 158 aa22.61■■□□□ 1.21
CMTM4-204ENST00000563952 STHQ8IWL8 128 aa22.61■■□□□ 1.21
CMTM4-204ENST00000563952 SMCO3A2RU48 225 aa22.6■■□□□ 1.21
CMTM4-204ENST00000563952 ZNF431Q8TF32 576 aaPredicted RBP22.6■■□□□ 1.21
CMTM4-204ENST00000563952 PPP1R14BQ96C90 147 aa22.6■■□□□ 1.21
CMTM4-204ENST00000563952 NRN1Q9NPD7 142 aa22.6■■□□□ 1.21
CMTM4-204ENST00000563952 PTTG2Q9NZH5 202 aa22.6■■□□□ 1.21
CMTM4-204ENST00000563952 FAM25EA8MYX2 175 aa22.59■■□□□ 1.21
CMTM4-204ENST00000563952 PAX9P55771 341 aa22.59■■□□□ 1.21
CMTM4-204ENST00000563952 ZNF846Q147U1 533 aa22.59■■□□□ 1.21
CMTM4-204ENST00000563952 A0A0J9YWU9 116 aa22.58■■□□□ 1.21
CMTM4-204ENST00000563952 KNCNA6PVL3 124 aa22.58■■□□□ 1.21
CMTM4-204ENST00000563952 ASAH1Q13510 395 aa22.58■■□□□ 1.21
CMTM4-204ENST00000563952 PSMG4Q5JS54 123 aa22.58■■□□□ 1.21
CMTM4-204ENST00000563952 RAB40CQ96S21 281 aa22.58■■□□□ 1.21
CMTM4-204ENST00000563952 WDR12Q9GZL7 423 aaKnown RBP22.58■■□□□ 1.21
CMTM4-204ENST00000563952 CA1P00915 261 aaPredicted RBP22.57■■□□□ 1.2
CMTM4-204ENST00000563952 RCL1Q9Y2P8 373 aaKnown RBP22.57■■□□□ 1.2
CMTM4-204ENST00000563952 CCNKO75909 580 aa22.56■■□□□ 1.2
CMTM4-204ENST00000563952 MBPP02686 304 aaPredicted RBP22.56■■□□□ 1.2
CMTM4-204ENST00000563952 METTL15P1P0C7V9 234 aa22.56■■□□□ 1.2
CMTM4-204ENST00000563952 C12orf45Q8N5I9 185 aaPredicted RBP22.56■■□□□ 1.2
CMTM4-204ENST00000563952 C5orf51A6NDU8 294 aa22.55■■□□□ 1.2
CMTM4-204ENST00000563952 PMS2P5A8MQ11 134 aa22.55■■□□□ 1.2
CMTM4-204ENST00000563952 GATA2P23769 480 aaPredicted RBP22.55■■□□□ 1.2
CMTM4-204ENST00000563952 RRAS2P62070 204 aaPredicted RBP22.55■■□□□ 1.2
CMTM4-204ENST00000563952 SNRPD3P62318 126 aaKnown RBP22.55■■□□□ 1.2
CMTM4-204ENST00000563952 ACTL10Q5JWF8 245 aa22.55■■□□□ 1.2
CMTM4-204ENST00000563952 BPIFCQ8NFQ6 507 aa22.55■■□□□ 1.2
CMTM4-204ENST00000563952 UPK1BO75841 260 aa22.54■■□□□ 1.2
CMTM4-204ENST00000563952 CFDP00746 253 aaPredicted RBP22.54■■□□□ 1.2
CMTM4-204ENST00000563952 TMEM14EPQ6UXP3 125 aa22.54■■□□□ 1.2
CMTM4-204ENST00000563952 TMEM182Q6ZP80 229 aaPredicted RBP22.54■■□□□ 1.2
CMTM4-204ENST00000563952 TMEM144Q7Z5S9 345 aa22.54■■□□□ 1.2
CMTM4-204ENST00000563952 TRPT1Q86TN4 253 aaKnown RBP22.54■■□□□ 1.2
CMTM4-204ENST00000563952 FBXL17Q9UF56 701 aa22.54■■□□□ 1.2
CMTM4-204ENST00000563952 TSC22D2O75157 780 aa22.53■■□□□ 1.2
CMTM4-204ENST00000563952 TAS2R30P59541 319 aa22.53■■□□□ 1.2
CMTM4-204ENST00000563952 C1orf194Q5T5A4 169 aa22.53■■□□□ 1.2
CMTM4-204ENST00000563952 GATAD1Q8WUU5 269 aa22.53■■□□□ 1.2
CMTM4-204ENST00000563952 AGRNO00468 2067 aa22.53■■□□□ 1.2
CMTM4-204ENST00000563952 ORM2P19652 201 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms