RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 U3KQE9 123 aa6.95□□□□□ -1.3
CLN6-203ENST00000563917 EPPK1P58107 5090 aaKnown RBP6.95□□□□□ -1.3
CLN6-203ENST00000563917 FABP12A6NFH5 140 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 FAM90A26D6RGX4 464 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 PSG1P11464 419 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 C4BPBP20851 252 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 S100A7P31151 101 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 GPX4P36969 197 aaPredicted RBP6.94□□□□□ -1.3
CLN6-203ENST00000563917 TMBIM6P55061 237 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 RPP30P78346 268 aaKnown RBP6.94□□□□□ -1.3
CLN6-203ENST00000563917 SPCS2Q15005 226 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 USF2Q15853 346 aaPredicted RBP6.94□□□□□ -1.3
CLN6-203ENST00000563917 NMSQ5H8A3 153 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 SAMD13Q5VXD3 122 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 OR8G2PQ6IF36 304 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 COQ8AQ8NI60 647 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 RNF125Q96EQ8 232 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 XCL2Q9UBD3 114 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 HSPB7Q9UBY9 170 aa6.94□□□□□ -1.3
CLN6-203ENST00000563917 PAIP2BQ9ULR5 123 aaKnown RBP6.94□□□□□ -1.3
CLN6-203ENST00000563917 HYDINQ4G0P3 5121 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 ANKRD20A5PA0PJZ0 165 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 TMEM189A5PLL7 270 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 SNRPGP15A8MWD9 76 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 BUB3O43684 328 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 MED6O75586 246 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 RBMY1A1P0DJD3 496 aaKnown RBP6.93□□□□□ -1.3
CLN6-203ENST00000563917 RBMY1CP0DJD4 496 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 NKX2-1P43699 371 aaPredicted RBP6.93□□□□□ -1.3
CLN6-203ENST00000563917 ALDH3B2P48448 385 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 RBMY1FQ15415 496 aaKnown RBP6.93□□□□□ -1.3
CLN6-203ENST00000563917 Q6ZTC4 211 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 LYZL2Q7Z4W2 148 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 LINC00052Q96N35 136 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 RBKSQ9H477 322 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 APLNQ9ULZ1 77 aa6.93□□□□□ -1.3
CLN6-203ENST00000563917 IGHV4-4A0A075B6R2 117 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 DEFB131BA0A096LNP1 70 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 DUXBA0A1W2PPF3 345 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 H3BMM0 161 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 CFDP00746 253 aaPredicted RBP6.92□□□□□ -1.3
CLN6-203ENST00000563917 GIG44P09565 113 aaPredicted RBP6.92□□□□□ -1.3
CLN6-203ENST00000563917 SPART-AS1P0CW21 52 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 HLA-DRB4P13762 266 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 VAMP1P23763 118 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 LYZP61626 148 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 SUPT4H1P63272 117 aaKnown RBP6.92□□□□□ -1.3
CLN6-203ENST00000563917 C1orf194Q5T5A4 169 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 SPATA31B1PQ5VZV4 182 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 EBLN2Q6P2I7 272 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 TMED4Q7Z7H5 227 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 OR8I2Q8N0Y5 310 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 TOMM5Q8N4H5 51 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 MCFD2Q8NI22 146 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 CIB3Q96Q77 187 aaPredicted RBP6.92□□□□□ -1.3
CLN6-203ENST00000563917 NDUFAF3Q9BU61 184 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 RNF126Q9BV68 326 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 HLA-DRB4X5D2U9 266 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 X6R8D5 127 aa6.92□□□□□ -1.3
CLN6-203ENST00000563917 AGRNO00468 2067 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 IGHV3OR16-12A0A075B7B8 117 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 ELOA3CA0A087WX78 387 aaPredicted RBP6.91□□□□□ -1.3
CLN6-203ENST00000563917 TEX48A0A1B0GUV7 120 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 SMIM9A6NGZ8 99 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 IGKV3-20P01619 116 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 P0DMU3 169 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 FAM231AP0DMU4 169 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 FAM231CP0DMU5 169 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 S100A5P33763 92 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 PSMB3P49720 205 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 MEOX2P50222 304 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 PYDC2Q56P42 97 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 TMEM128Q5BJH2 165 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 GGNBP1Q5YKI7 109 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 FOXI2Q6ZQN5 318 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 OR4B1Q8NGF8 309 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 DYNC2LI1Q8TCX1 351 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 TMEM170AQ8WVE7 144 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 C7orf50Q9BRJ6 194 aaKnown RBP6.91□□□□□ -1.3
CLN6-203ENST00000563917 PRR13Q9NZ81 148 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 GOLT1BQ9Y3E0 138 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 BIRC6Q9NR09 4857 aa6.91□□□□□ -1.3
CLN6-203ENST00000563917 ISLRO14498 428 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 IFNA21P01568 189 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 TNFSF8P32971 234 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 GALR1P47211 349 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 EMP1P54849 157 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 ZNF90Q03938 601 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 OR2F1Q13607 317 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 GAMTQ14353 236 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 CSNK1G2-AS1Q8NCQ2 148 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 C16orf92Q96LL3 132 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 NEU1Q99519 415 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 SLC25A21Q9BQT8 299 aaPredicted RBP6.9□□□□□ -1.3
CLN6-203ENST00000563917 SAV1Q9H4B6 383 aaPredicted RBP6.9□□□□□ -1.3
CLN6-203ENST00000563917 RPRMQ9NS64 109 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 TMED3Q9Y3Q3 217 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 RFNGQ9Y644 331 aa6.9□□□□□ -1.3
CLN6-203ENST00000563917 CCDC160A6NGH7 325 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 HBE1P02100 147 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms