RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 PRR13Q9NZ81 148 aa18.35■□□□□ 0.53
SPG7-208ENST00000563783 PLECQ15149 4684 aaKnown RBP18.35■□□□□ 0.53
SPG7-208ENST00000563783 LY6G6CO95867 125 aa18.34■□□□□ 0.53
SPG7-208ENST00000563783 FABP1P07148 127 aa18.34■□□□□ 0.53
SPG7-208ENST00000563783 PSG1P11464 419 aa18.34■□□□□ 0.53
SPG7-208ENST00000563783 S100A5P33763 92 aa18.34■□□□□ 0.53
SPG7-208ENST00000563783 SNRPD3P62318 126 aaKnown RBP18.34■□□□□ 0.53
SPG7-208ENST00000563783 PYDC2Q56P42 97 aa18.34■□□□□ 0.53
SPG7-208ENST00000563783 ZNF705EA8MWA4 302 aaPredicted RBP18.33■□□□□ 0.52
SPG7-208ENST00000563783 IFNA4P05014 189 aa18.33■□□□□ 0.52
SPG7-208ENST00000563783 MIFP14174 115 aa18.33■□□□□ 0.52
SPG7-208ENST00000563783 SIGLEC15Q6ZMC9 328 aa18.33■□□□□ 0.52
SPG7-208ENST00000563783 Q8NAQ8 132 aa18.33■□□□□ 0.52
SPG7-208ENST00000563783 RNF125Q96EQ8 232 aa18.33■□□□□ 0.52
SPG7-208ENST00000563783 ZNF701M0R085 212 aaPredicted RBP18.32■□□□□ 0.52
SPG7-208ENST00000563783 ZNF79Q15937 498 aa18.32■□□□□ 0.52
SPG7-208ENST00000563783 LGALS9CQ6DKI2 356 aa18.32■□□□□ 0.52
SPG7-208ENST00000563783 SLC35E1Q96K37 410 aa18.32■□□□□ 0.52
SPG7-208ENST00000563783 TMED3Q9Y3Q3 217 aa18.32■□□□□ 0.52
SPG7-208ENST00000563783 MED6O75586 246 aa18.31■□□□□ 0.52
SPG7-208ENST00000563783 UBE2MP61081 183 aaKnown RBP18.31■□□□□ 0.52
SPG7-208ENST00000563783 GAMTQ14353 236 aa18.31■□□□□ 0.52
SPG7-208ENST00000563783 C1orf194Q5T5A4 169 aa18.31■□□□□ 0.52
SPG7-208ENST00000563783 TMED4Q7Z7H5 227 aa18.31■□□□□ 0.52
SPG7-208ENST00000563783 CCDC190Q86UF4 302 aa18.31■□□□□ 0.52
SPG7-208ENST00000563783 CIB3Q96Q77 187 aaPredicted RBP18.31■□□□□ 0.52
SPG7-208ENST00000563783 RAB40CQ96S21 281 aa18.31■□□□□ 0.52
SPG7-208ENST00000563783 C1QTNF4Q9BXJ3 329 aa18.31■□□□□ 0.52
SPG7-208ENST00000563783 NUTF2P61970 127 aaKnown RBP18.3■□□□□ 0.52
SPG7-208ENST00000563783 RAB11AP62491 216 aa18.3■□□□□ 0.52
SPG7-208ENST00000563783 PSMG4Q5JS54 123 aa18.3■□□□□ 0.52
SPG7-208ENST00000563783 ACTL10Q5JWF8 245 aa18.3■□□□□ 0.52
SPG7-208ENST00000563783 FBXL17Q9UF56 701 aa18.3■□□□□ 0.52
SPG7-208ENST00000563783 ZFP92A6NM28 416 aa18.29■□□□□ 0.52
SPG7-208ENST00000563783 KNCNA6PVL3 124 aa18.29■□□□□ 0.52
SPG7-208ENST00000563783 C11orf94C9JXX5 98 aa18.29■□□□□ 0.52
SPG7-208ENST00000563783 NANOS2P60321 138 aaKnown RBP18.29■□□□□ 0.52
SPG7-208ENST00000563783 CSNK1G2-AS1Q8NCQ2 148 aa18.29■□□□□ 0.52
SPG7-208ENST00000563783 TRGV9Q99603 122 aa18.29■□□□□ 0.52
SPG7-208ENST00000563783 IGKV1D-37A0A075B6S9 117 aa18.28■□□□□ 0.52
SPG7-208ENST00000563783 CFDP00746 253 aaPredicted RBP18.28■□□□□ 0.52
SPG7-208ENST00000563783 C4BPBP20851 252 aa18.28■□□□□ 0.52
SPG7-208ENST00000563783 VAMP1P23763 118 aa18.28■□□□□ 0.52
SPG7-208ENST00000563783 RPP30P78346 268 aaKnown RBP18.28■□□□□ 0.52
SPG7-208ENST00000563783 HYDINQ4G0P3 5121 aa18.28■□□□□ 0.52
SPG7-208ENST00000563783 SFT2D2O95562 160 aa18.27■□□□□ 0.52
SPG7-208ENST00000563783 NKX2-1P43699 371 aaPredicted RBP18.27■□□□□ 0.52
SPG7-208ENST00000563783 RBM38Q9H0Z9 239 aaKnown RBP18.27■□□□□ 0.52
SPG7-208ENST00000563783 SNRPGP15A8MWD9 76 aa18.26■□□□□ 0.51
SPG7-208ENST00000563783 SPANXN2Q5MJ10 180 aa18.26■□□□□ 0.51
SPG7-208ENST00000563783 SAMD13Q5VXD3 122 aa18.26■□□□□ 0.51
SPG7-208ENST00000563783 CENPSQ8N2Z9 138 aa18.26■□□□□ 0.51
SPG7-208ENST00000563783 THAP8Q8NA92 274 aa18.26■□□□□ 0.51
SPG7-208ENST00000563783 C2CD4CQ8TF44 421 aa18.26■□□□□ 0.51
SPG7-208ENST00000563783 CLUHP3Q96NS8 147 aa18.26■□□□□ 0.51
SPG7-208ENST00000563783 TBC1D24Q9ULP9 559 aa18.26■□□□□ 0.51
SPG7-208ENST00000563783 X6R8D5 127 aa18.26■□□□□ 0.51
SPG7-208ENST00000563783 IGHV4-28A0A0C4DH34 117 aa18.25■□□□□ 0.51
SPG7-208ENST00000563783 H3BMM0 161 aa18.25■□□□□ 0.51
SPG7-208ENST00000563783 HLA-DRB4P13762 266 aa18.25■□□□□ 0.51
SPG7-208ENST00000563783 PPP1R1AQ13522 171 aa18.25■□□□□ 0.51
SPG7-208ENST00000563783 SLC45A2Q9UMX9 530 aa18.25■□□□□ 0.51
SPG7-208ENST00000563783 HLA-DRB4X5D2U9 266 aa18.25■□□□□ 0.51
SPG7-208ENST00000563783 NAP1L6A6NFF2 107 aa18.24■□□□□ 0.51
SPG7-208ENST00000563783 CCDC160A6NGH7 325 aa18.24■□□□□ 0.51
SPG7-208ENST00000563783 SYNGR2O43760 224 aa18.24■□□□□ 0.51
SPG7-208ENST00000563783 ZNF90Q03938 601 aa18.24■□□□□ 0.51
SPG7-208ENST00000563783 PBDC1Q9BVG4 233 aa18.24■□□□□ 0.51
SPG7-208ENST00000563783 EPPK1P58107 5090 aaKnown RBP18.24■□□□□ 0.51
SPG7-208ENST00000563783 RBMY1A1P0DJD3 496 aaKnown RBP18.23■□□□□ 0.51
SPG7-208ENST00000563783 RBMY1CP0DJD4 496 aa18.23■□□□□ 0.51
SPG7-208ENST00000563783 ID1P41134 155 aa18.23■□□□□ 0.51
SPG7-208ENST00000563783 PSMB3P49720 205 aa18.23■□□□□ 0.51
SPG7-208ENST00000563783 RBMY1FQ15415 496 aaKnown RBP18.23■□□□□ 0.51
SPG7-208ENST00000563783 SPATA31B1PQ5VZV4 182 aa18.23■□□□□ 0.51
SPG7-208ENST00000563783 GGNBP1Q5YKI7 109 aa18.23■□□□□ 0.51
SPG7-208ENST00000563783 PRSS46E5RG02 174 aa18.22■□□□□ 0.51
SPG7-208ENST00000563783 DEFB4AO15263 64 aa18.22■□□□□ 0.51
SPG7-208ENST00000563783 SRRQ9GZT4 340 aa18.22■□□□□ 0.51
SPG7-208ENST00000563783 IAPPP10997 89 aa18.21■□□□□ 0.51
SPG7-208ENST00000563783 S100A7P31151 101 aa18.21■□□□□ 0.51
SPG7-208ENST00000563783 IGKV1OR2-108A0A075B7D4 117 aa18.2■□□□□ 0.5
SPG7-208ENST00000563783 ISLRO14498 428 aa18.2■□□□□ 0.5
SPG7-208ENST00000563783 MEOX2P50222 304 aa18.2■□□□□ 0.5
SPG7-208ENST00000563783 LYZP61626 148 aa18.2■□□□□ 0.5
SPG7-208ENST00000563783 FOXI2Q6ZQN5 318 aa18.2■□□□□ 0.5
SPG7-208ENST00000563783 NEU1Q99519 415 aa18.2■□□□□ 0.5
SPG7-208ENST00000563783 SOCS3O14543 225 aa18.19■□□□□ 0.5
SPG7-208ENST00000563783 SAV1Q9H4B6 383 aaPredicted RBP18.19■□□□□ 0.5
SPG7-208ENST00000563783 NDUFB6O95139 128 aa18.18■□□□□ 0.5
SPG7-208ENST00000563783 BIRC6Q9NR09 4857 aa18.18■□□□□ 0.5
SPG7-208ENST00000563783 KMT2AQ03164 3969 aa18.17■□□□□ 0.5
SPG7-208ENST00000563783 ELOA3CA0A087WX78 387 aaPredicted RBP18.17■□□□□ 0.5
SPG7-208ENST00000563783 TRAV10A0A0B4J240 114 aa18.17■□□□□ 0.5
SPG7-208ENST00000563783 SMIM9A6NGZ8 99 aa18.17■□□□□ 0.5
SPG7-208ENST00000563783 HOXB5P09067 269 aa18.17■□□□□ 0.5
SPG7-208ENST00000563783 HLA-DMBP28068 263 aa18.17■□□□□ 0.5
SPG7-208ENST00000563783 ID3Q02535 119 aa18.17■□□□□ 0.5
SPG7-208ENST00000563783 ZNF705AQ6ZN79 300 aaPredicted RBP18.17■□□□□ 0.5
SPG7-208ENST00000563783 OR8I2Q8N0Y5 310 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms