RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 GINS3Q9BRX5 216 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 PAIP2BQ9ULR5 123 aaKnown RBP6.38□□□□□ -1.39
UBR1-204ENST00000563239 BIRC6Q9NR09 4857 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 STAB2Q8WWQ8 2551 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 RBMY1BA6NDE4 496 aaKnown RBP6.37□□□□□ -1.39
UBR1-204ENST00000563239 RBMY1EA6NEQ0 496 aaKnown RBP6.37□□□□□ -1.39
UBR1-204ENST00000563239 TSC22D2O75157 780 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 DFFBO76075 338 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 SIX6O95475 246 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 RBMY1DP0C7P1 496 aaKnown RBP6.37□□□□□ -1.39
UBR1-204ENST00000563239 METTL15P1P0C7V9 234 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 RD3LP0DJH9 198 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 NPPCP23582 126 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 GSG1LQ6UXU4 331 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 TMEM182Q6ZP80 229 aaPredicted RBP6.37□□□□□ -1.39
UBR1-204ENST00000563239 RBPMS2Q6ZRY4 209 aaKnown RBP6.37□□□□□ -1.39
UBR1-204ENST00000563239 ACOT7LQ6ZUV0 252 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 GTSCR1Q86UQ5 136 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 DEFB125Q8N687 156 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 STPG3Q8N7X2 389 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 Q8WTZ3 238 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 CITED4Q96RK1 184 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 TRGV9Q99603 122 aa6.37□□□□□ -1.39
UBR1-204ENST00000563239 SPAG8Q99932 426 aaPredicted RBP6.37□□□□□ -1.39
UBR1-204ENST00000563239 GPN1Q9HCN4 374 aaPredicted RBP6.37□□□□□ -1.39
UBR1-204ENST00000563239 ZFP92A6NM28 416 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 OR11H12B2RN74 326 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 GOSR2O14653 212 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 SCGB2A1O75556 95 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 IL4P05112 153 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 H2BFSP57053 126 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 RAB32Q13637 225 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 ODF3L2Q3SX64 289 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 LAMTOR1Q6IAA8 161 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 OR8G2PQ6IF36 304 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 C16orf54Q6UWD8 224 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 TCF24Q7RTU0 167 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 OR51G1Q8NGK1 321 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 METTL26Q96S19 204 aa6.36□□□□□ -1.39
UBR1-204ENST00000563239 LSM5Q9Y4Y9 91 aaKnown RBP6.36□□□□□ -1.39
UBR1-204ENST00000563239 IGKV3-7A0A075B6H7 116 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 FAM24AA6NFZ4 105 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 H0YIZ8 118 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 BUB3O43684 328 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 PTTG1O95997 202 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 HNRNPCP07910 306 aaKnown RBP eCLIP6.35□□□□□ -1.39
UBR1-204ENST00000563239 NHLRC4P0CG21 123 aaPredicted RBP6.35□□□□□ -1.39
UBR1-204ENST00000563239 GATA2P23769 480 aaPredicted RBP6.35□□□□□ -1.39
UBR1-204ENST00000563239 P2RY1P47900 373 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 RRAS2P62070 204 aaPredicted RBP6.35□□□□□ -1.39
UBR1-204ENST00000563239 DLK1P80370 383 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 OR2F1Q13607 317 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 HAGHQ16775 308 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 TMEM144Q7Z5S9 345 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 GBGT1Q8N5D6 347 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 FAM24BQ8N5W8 94 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 GLMPQ8WWB7 406 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 RNF125Q96EQ8 232 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 TM2D3Q9BRN9 247 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 MS4A6AQ9H2W1 248 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 SRD5A3Q9H8P0 318 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 UBQLN2Q9UHD9 624 aa6.35□□□□□ -1.39
UBR1-204ENST00000563239 A0A1W2PS18 150 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 IGSF23A1L1A6 192 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 OR4C46A6NHA9 309 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 FNDC10F2Z333 226 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 DEDDO75618 318 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 TFPI2P48307 235 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 EIF2B2P49770 351 aaKnown RBP6.34□□□□□ -1.39
UBR1-204ENST00000563239 S100A10P60903 97 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 DCANP1Q8TF63 244 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 FAM110AQ9BQ89 295 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 NMES1Q9C002 83 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 TUBA4BQ9H853 241 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 LYRM2Q9NU23 88 aaPredicted RBP6.34□□□□□ -1.39
UBR1-204ENST00000563239 RABAC1Q9UI14 185 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 ALG5Q9Y673 324 aa6.34□□□□□ -1.39
UBR1-204ENST00000563239 TRAV2A0A0B4J234 112 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 K7EQG2 157 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 L7N2F9 121 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 SSNA1O43805 119 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 CST7O76096 145 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 CD5P06127 495 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 CXCL3P19876 107 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 BMI1P35226 326 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 BCAP31P51572 246 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 CAV2P51636 162 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 LYZP61626 148 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 VAMP2P63027 116 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 AKR1C1Q04828 323 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 ZNF124Q15973 351 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 VWC2Q2TAL6 325 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 CYP2G1PQ6ZSU1 146 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 WFDC3Q8IUB2 231 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 APRG1Q8IVJ8 170 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 TMEM252Q8N6L7 170 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 OR10P1Q8NGE3 313 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 C17orf77Q96MU5 243 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 RNF126Q9BV68 326 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 PBDC1Q9BVG4 233 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms