RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 GP9P14770 177 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 NTF3P20783 257 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 G0S2P27469 103 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 GNG5P63218 68 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 HBBP68871 147 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 TNXAQ16473 311 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 ZNF841Q6ZN19 808 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 FAM19A2Q8N3H0 131 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 C11orf42Q8N5U0 333 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 TPSG1Q9NRR2 321 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 CADP27708 2225 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 FRYQ5TBA9 3013 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 C19orf71A6NCJ1 209 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 IGHV3-48P01763 117 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 DMRTA1Q5VZB9 504 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 HCP5Q6MZN7 132 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 BLNKQ8WV28 456 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 RITA1Q96K30 269 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 RNF5Q99942 180 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 SRSF8Q9BRL6 282 aaKnown RBP10.47□□□□□ -0.73
USB1-207ENST00000563149 TMEM208Q9BTX3 173 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 LPAR2Q9HBW0 351 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 DYNLRB1Q9NP97 96 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 TMEM14CQ9P0S9 112 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 SIGLEC9Q9Y336 463 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 F11RQ9Y624 299 aaKnown RBP10.47□□□□□ -0.73
USB1-207ENST00000563149 TRBV6-1A0A0K0K1D8 114 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 M0R2Z0 102 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 PLAUP00749 431 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 IGLV1-47P01700 117 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 TCRAP04437 139 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 BTF3P20290 206 aaKnown RBP10.47□□□□□ -0.73
USB1-207ENST00000563149 OR8B3Q8NGG8 313 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 OR8B2Q96RD0 313 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 CLEC7AQ9BXN2 247 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 OTORQ9NRC9 128 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 HIGD1AQ9Y241 93 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 ZNF835Q9Y2P0 537 aa10.47□□□□□ -0.73
USB1-207ENST00000563149 IGHV1-69-2A0A0G2JMI3 117 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 KLK10O43240 276 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 P01737 135 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 RBP4P02753 201 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 LINC00614P0C842 121 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 DAZAP1Q96EP5 407 aaKnown RBP10.46□□□□□ -0.74
USB1-207ENST00000563149 TXN2Q99757 166 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 Q9H3A6 140 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 C1RLQ9NZP8 487 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 RALYQ9UKM9 306 aaKnown RBP10.46□□□□□ -0.74
USB1-207ENST00000563149 RNF24Q9Y225 148 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 GOLT1BQ9Y3E0 138 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 INSIG2Q9Y5U4 225 aa10.46□□□□□ -0.74
USB1-207ENST00000563149 IGHV2-26A0A0B4J1V2 119 aa10.45□□□□□ -0.74
USB1-207ENST00000563149 SHISA9B4DS77 424 aa10.45□□□□□ -0.74
USB1-207ENST00000563149 NPIPB6E9PJ23 425 aa10.45□□□□□ -0.74
USB1-207ENST00000563149 APOBEC3AP31941 199 aaPredicted RBP10.45□□□□□ -0.74
USB1-207ENST00000563149 CAMPP49913 170 aa10.45□□□□□ -0.74
USB1-207ENST00000563149 HNRNPA3P51991 378 aaKnown RBP10.45□□□□□ -0.74
USB1-207ENST00000563149 PPP1R27Q86WC6 154 aa10.45□□□□□ -0.74
USB1-207ENST00000563149 CHCHD1Q96BP2 118 aaKnown RBP10.45□□□□□ -0.74
USB1-207ENST00000563149 COL6A3P12111 3177 aa10.45□□□□□ -0.74
USB1-207ENST00000563149 IGHV1-3A0A0C4DH29 117 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 VWC2LB2RUY7 222 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 B9A039 149 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 TEX22C9J3V5 150 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 E7EQL1 145 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 GFRALQ6UXV0 394 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 Q6ZN92 141 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 RBPMS2Q6ZRY4 209 aaKnown RBP10.44□□□□□ -0.74
USB1-207ENST00000563149 MRPS16Q9Y3D3 137 aaKnown RBP10.44□□□□□ -0.74
USB1-207ENST00000563149 WDFY4Q6ZS81 3184 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 TRAV9-2A0A087WT02 112 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 IGHV3-72A0A0B4J1Y9 119 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 C2orf70A6NJV1 201 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 BUB1B-PAK6H3BSN5 160 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 FAM87AP0C7U9 286 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 RBPJQ06330 500 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 RUSC1-AS1Q66K80 236 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 RNASEKQ6P5S7 137 aaKnown RBP10.44□□□□□ -0.74
USB1-207ENST00000563149 TCF24Q7RTU0 167 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 WNT10AQ9GZT5 417 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 ZFP30Q9Y2G7 519 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 LAMTOR2Q9Y2Q5 125 aa10.44□□□□□ -0.74
USB1-207ENST00000563149 IGLC1P0CG04 106 aa10.43□□□□□ -0.74
USB1-207ENST00000563149 HOXB4P17483 251 aaPredicted RBP10.43□□□□□ -0.74
USB1-207ENST00000563149 GPR6P46095 362 aaPredicted RBP10.43□□□□□ -0.74
USB1-207ENST00000563149 FOXA3P55318 350 aaPredicted RBP10.43□□□□□ -0.74
USB1-207ENST00000563149 BATFQ16520 125 aa10.43□□□□□ -0.74
USB1-207ENST00000563149 EBLN2Q6P2I7 272 aa10.43□□□□□ -0.74
USB1-207ENST00000563149 NDFIP1Q9BT67 221 aa10.43□□□□□ -0.74
USB1-207ENST00000563149 SSBP4Q9BWG4 385 aaPredicted RBP10.43□□□□□ -0.74
USB1-207ENST00000563149 RPH3ALQ9UNE2 315 aa10.43□□□□□ -0.74
USB1-207ENST00000563149 A6NNC1 897 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 PSG1P11464 419 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 CNTFRP26992 372 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 ASPHD1Q5U4P2 390 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 C16orf54Q6UWD8 224 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 LINC00322Q6ZN03 302 aaPredicted RBP10.42□□□□□ -0.74
USB1-207ENST00000563149 Q86TA4 180 aa10.42□□□□□ -0.74
USB1-207ENST00000563149 PRSS33Q8NF86 280 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms