RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 DEFB125Q8N687 156 aa12.36□□□□□ -0.43
CDT1-202ENST00000562747 NARS2Q96I59 477 aaKnown RBP12.36□□□□□ -0.43
CDT1-202ENST00000562747 EDA2RQ9HAV5 297 aa12.36□□□□□ -0.43
CDT1-202ENST00000562747 GPN1Q9HCN4 374 aaPredicted RBP12.36□□□□□ -0.43
CDT1-202ENST00000562747 IGKV1D-37A0A075B6S9 117 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 C5orf51A6NDU8 294 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 FAM25EA8MYX2 175 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 PRAF2O60831 178 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 MBPP02686 304 aaPredicted RBP12.35□□□□□ -0.43
CDT1-202ENST00000562747 IL4P05112 153 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 FABP1P07148 127 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 PAX9P55771 341 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 PAFAH1B2P68402 229 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 LINC00322Q6ZN03 302 aaPredicted RBP12.35□□□□□ -0.43
CDT1-202ENST00000562747 OR51G1Q8NGK1 321 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 C2orf50Q96LR7 162 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 TRGV9Q99603 122 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 FAM110AQ9BQ89 295 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 WFDC10AQ9H1F0 79 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 SRD5A3Q9H8P0 318 aa12.35□□□□□ -0.43
CDT1-202ENST00000562747 RCL1Q9Y2P8 373 aaKnown RBP12.35□□□□□ -0.43
CDT1-202ENST00000562747 SNRPGP15A8MWD9 76 aa12.34□□□□□ -0.43
CDT1-202ENST00000562747 INMT-MINDY4F8WBC2 141 aa12.34□□□□□ -0.43
CDT1-202ENST00000562747 TSC22D2O75157 780 aa12.34□□□□□ -0.43
CDT1-202ENST00000562747 HNRNPCP07910 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDT1-202ENST00000562747 PSG1P11464 419 aa12.34□□□□□ -0.43
CDT1-202ENST00000562747 GSG1LQ6UXU4 331 aa12.34□□□□□ -0.43
CDT1-202ENST00000562747 LILRB2Q8N423 598 aa12.34□□□□□ -0.43
CDT1-202ENST00000562747 THAP8Q8NA92 274 aa12.34□□□□□ -0.43
CDT1-202ENST00000562747 GRAMD2BQ96HH9 432 aa12.34□□□□□ -0.43
CDT1-202ENST00000562747 MARVELD1Q9BSK0 173 aa12.34□□□□□ -0.43
CDT1-202ENST00000562747 U3KQE9 123 aa12.34□□□□□ -0.43
CDT1-202ENST00000562747 TRAV2A0A0B4J234 112 aa12.33□□□□□ -0.44
CDT1-202ENST00000562747 IGHV3-66A0A0C4DH42 116 aa12.33□□□□□ -0.44
CDT1-202ENST00000562747 PMS2P5A8MQ11 134 aa12.33□□□□□ -0.44
CDT1-202ENST00000562747 DFFBO76075 338 aa12.33□□□□□ -0.44
CDT1-202ENST00000562747 CMC4P56277 68 aaPredicted RBP12.33□□□□□ -0.44
CDT1-202ENST00000562747 USF2Q15853 346 aaPredicted RBP12.33□□□□□ -0.44
CDT1-202ENST00000562747 HAGHQ16775 308 aa12.33□□□□□ -0.44
CDT1-202ENST00000562747 TMEM14EPQ6UXP3 125 aa12.33□□□□□ -0.44
CDT1-202ENST00000562747 RABAC1Q9UI14 185 aa12.33□□□□□ -0.44
CDT1-202ENST00000562747 IGKV1OR2-108A0A075B7D4 117 aa12.32□□□□□ -0.44
CDT1-202ENST00000562747 C7orf66A4D0T2 115 aa12.32□□□□□ -0.44
CDT1-202ENST00000562747 RBMY1BA6NDE4 496 aaKnown RBP12.32□□□□□ -0.44
CDT1-202ENST00000562747 RBMY1EA6NEQ0 496 aaKnown RBP12.32□□□□□ -0.44
CDT1-202ENST00000562747 RBMY1DP0C7P1 496 aaKnown RBP12.32□□□□□ -0.44
CDT1-202ENST00000562747 P2RY1P47900 373 aa12.32□□□□□ -0.44
CDT1-202ENST00000562747 ZNF90Q03938 601 aa12.32□□□□□ -0.44
CDT1-202ENST00000562747 ODF3L2Q3SX64 289 aa12.32□□□□□ -0.44
CDT1-202ENST00000562747 ACOT7LQ6ZUV0 252 aa12.32□□□□□ -0.44
CDT1-202ENST00000562747 RNF125Q96EQ8 232 aa12.32□□□□□ -0.44
CDT1-202ENST00000562747 IGKV3-7A0A075B6H7 116 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 FNDC10F2Z333 226 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 K7EPK0 472 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 L7N2F9 121 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 CFDP00746 253 aaPredicted RBP12.31□□□□□ -0.44
CDT1-202ENST00000562747 NUP62P37198 522 aaPredicted RBP12.31□□□□□ -0.44
CDT1-202ENST00000562747 EIF2B2P49770 351 aaKnown RBP12.31□□□□□ -0.44
CDT1-202ENST00000562747 RPL11P62913 178 aaKnown RBP12.31□□□□□ -0.44
CDT1-202ENST00000562747 VAMP2P63027 116 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 AKR1C1Q04828 323 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 OR8G2PQ6IF36 304 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 C16orf54Q6UWD8 224 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 TMEM144Q7Z5S9 345 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 GBGT1Q8N5D6 347 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 SPATA25Q9BR10 227 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 MS4A6AQ9H2W1 248 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 UBQLN2Q9UHD9 624 aa12.31□□□□□ -0.44
CDT1-202ENST00000562747 LSM5Q9Y4Y9 91 aaKnown RBP12.31□□□□□ -0.44
CDT1-202ENST00000562747 DNASE2O00115 360 aaPredicted RBP12.3□□□□□ -0.44
CDT1-202ENST00000562747 METTL15P1P0C7V9 234 aa12.3□□□□□ -0.44
CDT1-202ENST00000562747 TFPI2P48307 235 aa12.3□□□□□ -0.44
CDT1-202ENST00000562747 DLK1P80370 383 aa12.3□□□□□ -0.44
CDT1-202ENST00000562747 IL15RAQ13261 267 aa12.3□□□□□ -0.44
CDT1-202ENST00000562747 OR10P1Q8NGE3 313 aa12.3□□□□□ -0.44
CDT1-202ENST00000562747 GLMPQ8WWB7 406 aa12.3□□□□□ -0.44
CDT1-202ENST00000562747 PFDN2Q9UHV9 154 aa12.3□□□□□ -0.44
CDT1-202ENST00000562747 LOC102724200A0A096LPH7 203 aaPredicted RBP12.29□□□□□ -0.44
CDT1-202ENST00000562747 HELTA6NFD8 242 aa12.29□□□□□ -0.44
CDT1-202ENST00000562747 BUB3O43684 328 aa12.29□□□□□ -0.44
CDT1-202ENST00000562747 CCNKO75909 580 aa12.29□□□□□ -0.44
CDT1-202ENST00000562747 PVALBP20472 110 aaPredicted RBP12.29□□□□□ -0.44
CDT1-202ENST00000562747 AP2S1P53680 142 aaPredicted RBP12.29□□□□□ -0.44
CDT1-202ENST00000562747 LYZP61626 148 aa12.29□□□□□ -0.44
CDT1-202ENST00000562747 PBDC1Q9BVG4 233 aa12.29□□□□□ -0.44
CDT1-202ENST00000562747 GGTLC1Q9BX51 225 aa12.29□□□□□ -0.44
CDT1-202ENST00000562747 C11orf1Q9H5F2 150 aa12.29□□□□□ -0.44
CDT1-202ENST00000562747 PLECQ15149 4684 aaKnown RBP12.29□□□□□ -0.44
CDT1-202ENST00000562747 ALMS1Q8TCU4 4167 aa12.29□□□□□ -0.44
CDT1-202ENST00000562747 SMCO3A2RU48 225 aa12.28□□□□□ -0.44
CDT1-202ENST00000562747 OR2F1Q13607 317 aa12.28□□□□□ -0.44
CDT1-202ENST00000562747 WFDC3Q8IUB2 231 aa12.28□□□□□ -0.44
CDT1-202ENST00000562747 GGACTQ9BVM4 153 aa12.28□□□□□ -0.44
CDT1-202ENST00000562747 NPVFQ9HCQ7 196 aa12.28□□□□□ -0.44
CDT1-202ENST00000562747 MGAT4CQ9UBM8 478 aa12.28□□□□□ -0.44
CDT1-202ENST00000562747 GOSR2O14653 212 aa12.27□□□□□ -0.45
CDT1-202ENST00000562747 BCAP31P51572 246 aa12.27□□□□□ -0.45
CDT1-202ENST00000562747 S100A10P60903 97 aa12.27□□□□□ -0.45
CDT1-202ENST00000562747 RRAS2P62070 204 aaPredicted RBP12.27□□□□□ -0.45
CDT1-202ENST00000562747 RAB32Q13637 225 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms