RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 SELENOTP62341 195 aa12.39□□□□□ -0.43
USB1-206ENST00000562534 NHLH2Q02577 135 aa12.39□□□□□ -0.43
USB1-206ENST00000562534 RAB31Q13636 194 aa12.39□□□□□ -0.43
USB1-206ENST00000562534 LCN12Q6JVE5 192 aa12.39□□□□□ -0.43
USB1-206ENST00000562534 LILRB2Q8N423 598 aa12.39□□□□□ -0.43
USB1-206ENST00000562534 NARS2Q96I59 477 aaKnown RBP12.39□□□□□ -0.43
USB1-206ENST00000562534 UQCC1Q9NVA1 299 aa12.39□□□□□ -0.43
USB1-206ENST00000562534 PFDN2Q9UHV9 154 aa12.39□□□□□ -0.43
USB1-206ENST00000562534 WI2-2373I1.2A0A1W2PRP0 233 aa12.38□□□□□ -0.43
USB1-206ENST00000562534 IL4P05112 153 aa12.38□□□□□ -0.43
USB1-206ENST00000562534 CD5P06127 495 aa12.38□□□□□ -0.43
USB1-206ENST00000562534 CRYBB3P26998 211 aa12.38□□□□□ -0.43
USB1-206ENST00000562534 RPL12P30050 165 aaKnown RBP12.38□□□□□ -0.43
USB1-206ENST00000562534 EWSR1Q01844 656 aaKnown RBP eCLIP12.38□□□□□ -0.43
USB1-206ENST00000562534 LAMTOR1Q6IAA8 161 aa12.38□□□□□ -0.43
USB1-206ENST00000562534 Q6ZNX1 250 aa12.38□□□□□ -0.43
USB1-206ENST00000562534 BPIFCQ8NFQ6 507 aa12.38□□□□□ -0.43
USB1-206ENST00000562534 RHPN1-AS1Q9BWJ2 59 aa12.38□□□□□ -0.43
USB1-206ENST00000562534 TMEM231Q9H6L2 316 aa12.38□□□□□ -0.43
USB1-206ENST00000562534 MBD2Q9UBB5 411 aa12.38□□□□□ -0.43
USB1-206ENST00000562534 MLXQ9UH92 298 aa12.38□□□□□ -0.43
USB1-206ENST00000562534 ZNF256Q9Y2P7 627 aaPredicted RBP12.38□□□□□ -0.43
USB1-206ENST00000562534 TRAV25A0A0B4J276 109 aa12.37□□□□□ -0.43
USB1-206ENST00000562534 CHEK1O14757 476 aa12.37□□□□□ -0.43
USB1-206ENST00000562534 EDN2P20800 178 aa12.37□□□□□ -0.43
USB1-206ENST00000562534 VWC2Q2TAL6 325 aa12.37□□□□□ -0.43
USB1-206ENST00000562534 CD300EQ496F6 205 aaPredicted RBP12.37□□□□□ -0.43
USB1-206ENST00000562534 RBPMS2Q6ZRY4 209 aaKnown RBP12.37□□□□□ -0.43
USB1-206ENST00000562534 CYP2G1PQ6ZSU1 146 aa12.37□□□□□ -0.43
USB1-206ENST00000562534 RNF125Q96EQ8 232 aa12.37□□□□□ -0.43
USB1-206ENST00000562534 TMEM147Q9BVK8 224 aa12.37□□□□□ -0.43
USB1-206ENST00000562534 RABAC1Q9UI14 185 aa12.37□□□□□ -0.43
USB1-206ENST00000562534 LSM4Q9Y4Z0 139 aaKnown RBP12.37□□□□□ -0.43
USB1-206ENST00000562534 HNRNPCP07910 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
USB1-206ENST00000562534 S100A7P31151 101 aa12.36□□□□□ -0.43
USB1-206ENST00000562534 NUP62P37198 522 aaPredicted RBP12.36□□□□□ -0.43
USB1-206ENST00000562534 OR2F1Q13607 317 aa12.36□□□□□ -0.43
USB1-206ENST00000562534 BTNL8Q6UX41 500 aa12.36□□□□□ -0.43
USB1-206ENST00000562534 OR5C1Q8NGR4 320 aa12.36□□□□□ -0.43
USB1-206ENST00000562534 OR2T35Q8NGX2 323 aa12.36□□□□□ -0.43
USB1-206ENST00000562534 GRAMD2BQ96HH9 432 aa12.36□□□□□ -0.43
USB1-206ENST00000562534 VSIRQ9H7M9 311 aa12.36□□□□□ -0.43
USB1-206ENST00000562534 GP9P14770 177 aa12.35□□□□□ -0.43
USB1-206ENST00000562534 DEFA6Q01524 100 aa12.35□□□□□ -0.43
USB1-206ENST00000562534 USF2Q15853 346 aaPredicted RBP12.35□□□□□ -0.43
USB1-206ENST00000562534 CHAC2Q8WUX2 184 aa12.35□□□□□ -0.43
USB1-206ENST00000562534 PBDC1Q9BVG4 233 aa12.35□□□□□ -0.43
USB1-206ENST00000562534 WDR83OSQ9Y284 106 aa12.35□□□□□ -0.43
USB1-206ENST00000562534 HSPB11Q9Y547 144 aa12.35□□□□□ -0.43
USB1-206ENST00000562534 U3KQE9 123 aa12.35□□□□□ -0.43
USB1-206ENST00000562534 CMYA5Q8N3K9 4069 aa12.34□□□□□ -0.43
USB1-206ENST00000562534 IGHV3-49A0A0A0MS15 119 aa12.34□□□□□ -0.43
USB1-206ENST00000562534 ZNF785A8K8V0 405 aa12.34□□□□□ -0.43
USB1-206ENST00000562534 AGPAT2O15120 278 aa12.34□□□□□ -0.43
USB1-206ENST00000562534 MPDU1O75352 247 aa12.34□□□□□ -0.43
USB1-206ENST00000562534 APOHP02749 345 aaPredicted RBP12.34□□□□□ -0.43
USB1-206ENST00000562534 EIF2B2P49770 351 aaKnown RBP12.34□□□□□ -0.43
USB1-206ENST00000562534 LYZP61626 148 aa12.34□□□□□ -0.43
USB1-206ENST00000562534 Q5BKY6 102 aa12.34□□□□□ -0.43
USB1-206ENST00000562534 S100A7AQ86SG5 101 aa12.34□□□□□ -0.43
USB1-206ENST00000562534 ZNF546Q86UE3 836 aa12.34□□□□□ -0.43
USB1-206ENST00000562534 INO80EQ8NBZ0 244 aaPredicted RBP12.34□□□□□ -0.43
USB1-206ENST00000562534 RNF2Q99496 336 aa12.34□□□□□ -0.43
USB1-206ENST00000562534 SLC45A2Q9UMX9 530 aa12.34□□□□□ -0.43
USB1-206ENST00000562534 IGHV3OR16-13A0A075B7E8 117 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 IGHV3-74A0A0B4J1X5 117 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 IZUMO1RA6ND01 250 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 TSPAN4O14817 238 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 DFFBO76075 338 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 GATA2P23769 480 aaPredicted RBP12.33□□□□□ -0.44
USB1-206ENST00000562534 CAMLGP49069 296 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 AP2S1P53680 142 aaPredicted RBP12.33□□□□□ -0.44
USB1-206ENST00000562534 PLP1P60201 277 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 PAFAH1B2P68402 229 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 GUCA2BQ16661 112 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 PXDC1Q5TGL8 231 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 TMEM182Q6ZP80 229 aaPredicted RBP12.33□□□□□ -0.44
USB1-206ENST00000562534 TMEM61Q8N0U2 210 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 ST8SIA2Q92186 375 aa12.33□□□□□ -0.44
USB1-206ENST00000562534 AURKAIP1Q9NWT8 199 aaPredicted RBP12.33□□□□□ -0.44
USB1-206ENST00000562534 BUB3O43684 328 aa12.32□□□□□ -0.44
USB1-206ENST00000562534 ORM2P19652 201 aa12.32□□□□□ -0.44
USB1-206ENST00000562534 CLINT1Q14677 625 aa12.32□□□□□ -0.44
USB1-206ENST00000562534 C1orf194Q5T5A4 169 aa12.32□□□□□ -0.44
USB1-206ENST00000562534 FAM90A2PQ658T7 463 aa12.32□□□□□ -0.44
USB1-206ENST00000562534 Q6ZRG5 221 aa12.32□□□□□ -0.44
USB1-206ENST00000562534 AQP10Q96PS8 301 aa12.32□□□□□ -0.44
USB1-206ENST00000562534 MGST2Q99735 147 aa12.32□□□□□ -0.44
USB1-206ENST00000562534 ATP5SQ99766 215 aa12.32□□□□□ -0.44
USB1-206ENST00000562534 SPAG8Q99932 426 aaPredicted RBP12.32□□□□□ -0.44
USB1-206ENST00000562534 IGHV3-66A0A0C4DH42 116 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 UBE2L5PA0A1B0GUS4 154 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 HYPMO75409 117 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 IFNA5P01569 189 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 PRB2P02812 416 aaPredicted RBP12.31□□□□□ -0.44
USB1-206ENST00000562534 LINC00869P0C866 280 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 FGF7P21781 194 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 RPL29P47914 159 aaKnown RBP12.31□□□□□ -0.44
USB1-206ENST00000562534 RPL11P62913 178 aaKnown RBP12.31□□□□□ -0.44
USB1-206ENST00000562534 C16orf54Q6UWD8 224 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms