RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 GZMBP10144 247 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 TFAMQ00059 246 aaKnown RBP2.61□□□□□ -1.99
SMG1-204ENST00000561940 GNA12Q03113 381 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 RGS21Q2M5E4 152 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 C5orf46Q6UWT4 87 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 DCXRQ7Z4W1 244 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 SPATA12Q7Z6I5 190 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 GID4Q8IVV7 300 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 WFDC5Q8TCV5 224 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 HRASLSQ9HDD0 168 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 PSORS1C2Q9UIG4 136 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 GUCA1BQ9UMX6 200 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 LSM5Q9Y4Y9 91 aaKnown RBP2.61□□□□□ -1.99
SMG1-204ENST00000561940 ZNF469Q96JG9 3925 aaPredicted RBP2.61□□□□□ -1.99
SMG1-204ENST00000561940 PLXNA2O75051 1894 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 ANAPC1Q9H1A4 1944 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 TRAV17A0A0B4J275 112 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 A0A1B0GW54 56 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 TMEM235A6NFC5 223 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 KNCNA6PVL3 124 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 FNDC10F2Z333 226 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 GOLGA6L19H0YKK7 550 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 H3BPC8 53 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 CCR7P32248 378 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 EMX1Q04741 257 aaPredicted RBP2.6□□□□□ -1.99
SMG1-204ENST00000561940 SBSNQ6UWP8 590 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 C3orf56Q8N813 242 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 CNEP1R1Q8N9A8 125 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 PECRQ9BY49 303 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 TMEM222Q9H0R3 208 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 OBSL1O75147 1896 aa2.6□□□□□ -1.99
SMG1-204ENST00000561940 CHD3Q12873 2000 aaKnown RBP2.59□□□□□ -1.99
SMG1-204ENST00000561940 C11orf86A6NJI1 115 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 APOMO95445 188 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 IGHV1-69P01742 117 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 S100A6P06703 90 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 SLCO1A2P46721 670 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 REG1BP48304 166 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 TBPL1P62380 186 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 IMPG1Q17R60 797 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 OR10K2Q6IF99 312 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 ZNF767PQ75MW2 155 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 SFRP2Q96HF1 295 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 DIRAS2Q96HU8 199 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 CCL13Q99616 98 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 MIEN1Q9BRT3 115 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 HS3ST2Q9Y278 367 aa2.59□□□□□ -1.99
SMG1-204ENST00000561940 KLK5Q9Y337 293 aaPredicted RBP2.59□□□□□ -1.99
SMG1-204ENST00000561940 IGHV3-15A0A0B4J1V0 119 aa2.58□□□□□ -2
SMG1-204ENST00000561940 MUC21A0A0G2JKD1 596 aa2.58□□□□□ -2
SMG1-204ENST00000561940 MUC21A0A140T8X8 626 aa2.58□□□□□ -2
SMG1-204ENST00000561940 CXorf51AA0A1B0GTR3 108 aa2.58□□□□□ -2
SMG1-204ENST00000561940 A0A1B0GV50 99 aa2.58□□□□□ -2
SMG1-204ENST00000561940 KRT75O95678 551 aa2.58□□□□□ -2
SMG1-204ENST00000561940 TNNC2P02585 160 aa2.58□□□□□ -2
SMG1-204ENST00000561940 RPL27AP46776 148 aaKnown RBP2.58□□□□□ -2
SMG1-204ENST00000561940 RAP1GDS1P52306 607 aa2.58□□□□□ -2
SMG1-204ENST00000561940 TCL1AP56279 114 aa2.58□□□□□ -2
SMG1-204ENST00000561940 TAS2R30P59541 319 aa2.58□□□□□ -2
SMG1-204ENST00000561940 NAA20P61599 178 aa2.58□□□□□ -2
SMG1-204ENST00000561940 HIST3H3Q16695 136 aa2.58□□□□□ -2
SMG1-204ENST00000561940 LGALS9BQ3B8N2 356 aa2.58□□□□□ -2
SMG1-204ENST00000561940 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.58□□□□□ -2
SMG1-204ENST00000561940 OR8J2Q8NGG1 315 aa2.58□□□□□ -2
SMG1-204ENST00000561940 OR2T27Q8NH04 317 aa2.58□□□□□ -2
SMG1-204ENST00000561940 CCL4L1Q8NHW4 92 aa2.58□□□□□ -2
SMG1-204ENST00000561940 ASB17Q8WXJ9 295 aa2.58□□□□□ -2
SMG1-204ENST00000561940 FAM96AQ9H5X1 160 aa2.58□□□□□ -2
SMG1-204ENST00000561940 UCK1Q9HA47 277 aa2.58□□□□□ -2
SMG1-204ENST00000561940 TNRC6AQ8NDV7 1962 aaKnown RBP2.58□□□□□ -2
SMG1-204ENST00000561940 MDC1Q14676 2089 aaKnown RBP2.57□□□□□ -2
SMG1-204ENST00000561940 NCOA6Q14686 2063 aaPredicted RBP2.57□□□□□ -2
SMG1-204ENST00000561940 CACNA1CQ13936 2221 aa2.57□□□□□ -2
SMG1-204ENST00000561940 CUBNO60494 3623 aa2.57□□□□□ -2
SMG1-204ENST00000561940 IGHV1-69-2A0A0G2JMI3 117 aa2.57□□□□□ -2
SMG1-204ENST00000561940 EVPLLA8MZ36 301 aa2.57□□□□□ -2
SMG1-204ENST00000561940 KLF7O75840 302 aaPredicted RBP2.57□□□□□ -2
SMG1-204ENST00000561940 ALOX5APP20292 161 aa2.57□□□□□ -2
SMG1-204ENST00000561940 GABRA2P47869 451 aa2.57□□□□□ -2
SMG1-204ENST00000561940 KRTAP12-1P59990 96 aa2.57□□□□□ -2
SMG1-204ENST00000561940 RAB5BP61020 215 aa2.57□□□□□ -2
SMG1-204ENST00000561940 ACSM3Q53FZ2 586 aa2.57□□□□□ -2
SMG1-204ENST00000561940 GLT6D1Q7Z4J2 308 aa2.57□□□□□ -2
SMG1-204ENST00000561940 GPR32P1Q8NGA4 272 aa2.57□□□□□ -2
SMG1-204ENST00000561940 TTTY12Q9BZ98 90 aa2.57□□□□□ -2
SMG1-204ENST00000561940 AK3Q9UIJ7 227 aa2.57□□□□□ -2
SMG1-204ENST00000561940 KIAA2026Q5HYC2 2103 aa2.57□□□□□ -2
SMG1-204ENST00000561940 CITO14578 2027 aa2.56□□□□□ -2
SMG1-204ENST00000561940 ABCA1O95477 2261 aa2.56□□□□□ -2
SMG1-204ENST00000561940 ROS1P08922 2347 aa2.56□□□□□ -2
SMG1-204ENST00000561940 GNRH2O43555 120 aa2.56□□□□□ -2
SMG1-204ENST00000561940 UCHL1P09936 223 aa2.56□□□□□ -2
SMG1-204ENST00000561940 FAM228BP0C875 321 aa2.56□□□□□ -2
SMG1-204ENST00000561940 MARCKSL1P49006 195 aa2.56□□□□□ -2
SMG1-204ENST00000561940 FABP9Q0Z7S8 132 aa2.56□□□□□ -2
SMG1-204ENST00000561940 C1orf194Q5T5A4 169 aa2.56□□□□□ -2
SMG1-204ENST00000561940 GPHB5Q86YW7 130 aa2.56□□□□□ -2
SMG1-204ENST00000561940 Q8NDZ9 215 aa2.56□□□□□ -2
SMG1-204ENST00000561940 RAB2BQ8WUD1 216 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms