RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 CA1P00915 261 aaPredicted RBP8.63□□□□□ -1.03
CARMIL3-204ENST00000561354 PIGPP57054 158 aa8.63□□□□□ -1.03
CARMIL3-204ENST00000561354 TCF24Q7RTU0 167 aa8.63□□□□□ -1.03
CARMIL3-204ENST00000561354 ZNF546Q86UE3 836 aa8.63□□□□□ -1.03
CARMIL3-204ENST00000561354 GBGT1Q8N5D6 347 aa8.63□□□□□ -1.03
CARMIL3-204ENST00000561354 PPP1R1CQ8WVI7 109 aa8.63□□□□□ -1.03
CARMIL3-204ENST00000561354 C2orf50Q96LR7 162 aa8.63□□□□□ -1.03
CARMIL3-204ENST00000561354 GINS3Q9BRX5 216 aa8.63□□□□□ -1.03
CARMIL3-204ENST00000561354 VSIRQ9H7M9 311 aa8.63□□□□□ -1.03
CARMIL3-204ENST00000561354 FAM212BQ9NTI7 297 aaPredicted RBP8.63□□□□□ -1.03
CARMIL3-204ENST00000561354 TNFSF18Q9UNG2 199 aa8.63□□□□□ -1.03
CARMIL3-204ENST00000561354 IGHV3OR16-13A0A075B7E8 117 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 IGHV3-74A0A0B4J1X5 117 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 DUXBA0A1W2PPF3 345 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 GPR31O00270 319 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 DEFB4AO15263 64 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 GNG7O60262 68 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 MPC2O95563 127 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 MT-CO2P00403 227 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 CXCL2P19875 107 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 PI3P19957 117 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 RAB14P61106 215 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 TMUB2Q71RG4 321 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 LGI3Q8N145 548 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 Q8NAQ8 132 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 INO80EQ8NBZ0 244 aaPredicted RBP8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 ZNF680Q8NEM1 530 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 MISP3Q96FF7 219 aa8.62□□□□□ -1.03
CARMIL3-204ENST00000561354 IGLL5B9A064 214 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 CCSO14618 274 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 NUP62P37198 522 aaPredicted RBP8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 AP2S1P53680 142 aaPredicted RBP8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 DEFB131AP59861 70 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 PRCDQ00LT1 54 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 TMEM41BQ5BJD5 291 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 TOMM20LQ6UXN7 152 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 ACOT7LQ6ZUV0 252 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 SLC51BQ86UW2 128 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 KCNRGQ8N5I3 272 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 ST8SIA2Q92186 375 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 SEC22AQ96IW7 307 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 ARL6Q9H0F7 186 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 MS4A6AQ9H2W1 248 aa8.61□□□□□ -1.03
CARMIL3-204ENST00000561354 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 KANTRA0A1W2PQU2 76 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 DNASE2O00115 360 aaPredicted RBP8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 ST8SIA3O43173 380 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 BCL2L11O43521 198 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 APOHP02749 345 aaPredicted RBP8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 HTR2BP41595 481 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 HSPE1P61604 102 aaKnown RBP8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 ERHP84090 104 aaKnown RBP8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 SMCO1Q147U7 214 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 CLLU1Q5K131 121 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 LEMD1Q68G75 181 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 PRSS54Q6PEW0 395 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 LINC00336Q6ZUF6 198 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 H2BFWTQ7Z2G1 175 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 LILRB2Q8N423 598 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 OR4A16Q8NH70 328 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 IL22RA2Q969J5 263 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 PINX1Q96BK5 328 aaKnown RBP8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 PHYHIPLQ96FC7 376 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 ZFAND3Q9H8U3 227 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 TMED3Q9Y3Q3 217 aa8.6□□□□□ -1.03
CARMIL3-204ENST00000561354 C3orf85A0A1B0GTC6 90 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 ADAP1O75689 374 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 IGHV3-48P01763 117 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 GIG44P09565 113 aaPredicted RBP8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 OR5AC1P0C628 307 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 RBMY1A1P0DJD3 496 aaKnown RBP8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 RBMY1CP0DJD4 496 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 MIFP14174 115 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 HLA-DMBP28068 263 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 NPBWR1P48145 328 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 RPL11P62913 178 aaKnown RBP8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 IL15RAQ13261 267 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 RBMY1FQ15415 496 aaKnown RBP8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 MORN3Q6PF18 240 aaPredicted RBP8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 ZNF600Q6ZNG1 722 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 TRPT1Q86TN4 253 aaKnown RBP8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 STHQ8IWL8 128 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 FAM24BQ8N5W8 94 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 TMEM222Q9H0R3 208 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 TMEM231Q9H6L2 316 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 MBD2Q9UBB5 411 aa8.59□□□□□ -1.03
CARMIL3-204ENST00000561354 TRAV10A0A0B4J240 114 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 IGHV4-28A0A0C4DH34 117 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 A0A1W2PS18 150 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 ZNF705EA8MWA4 302 aaPredicted RBP8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 INS-IGF2F8WCM5 200 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 CDS2O95674 445 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 TMEM50AO95807 157 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 IGKV1-39P01597 117 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 RLN2P04090 185 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 IGKV1D-39P04432 117 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 HOXB5P09067 269 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 SPP1P10451 314 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 EIF5AP63241 154 aaKnown RBP8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 IAH1Q2TAA2 248 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms