RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 GDPD1Q8N9F7 314 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 BORCS7Q96B45 105 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 SLAMF6Q96DU3 332 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 GPER1Q99527 375 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 TAS2R7Q9NYW3 318 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 ORMDL1Q9P0S3 153 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 NOSIPQ9Y314 301 aaKnown RBP0.24□□□□□ -2.37
USP8-218ENST00000561330 SBF1O95248 1867 aa0.24□□□□□ -2.37
USP8-218ENST00000561330 J3QRK9 145 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 IGLV3-1P01715 115 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 AP3S2P59780 193 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 C12orf74Q32Q52 190 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 SPINK9Q5DT21 86 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 KRTAP26-1Q6PEX3 210 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 C12orf45Q8N5I9 185 aaPredicted RBP0.23□□□□□ -2.37
USP8-218ENST00000561330 SLC30A7Q8NEW0 376 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 OR11H6Q8NGC7 330 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 OR2T35Q8NGX2 323 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 PRRT1Q99946 306 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 FBXO5Q9UKT4 447 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 TNFSF18Q9UNG2 199 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 KCPQ6ZWJ8 1503 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 DENND4CQ5VZ89 1909 aa0.23□□□□□ -2.37
USP8-218ENST00000561330 hCG_1818297A0A087WSY0 165 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 SMIM23A6NLE4 172 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 A8MT66 165 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 SERPINE1P05121 402 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 SMIM17P0DL12 118 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 PPIBP23284 216 aaKnown RBP0.22□□□□□ -2.37
USP8-218ENST00000561330 DYNLT1P63172 113 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 CIRBPQ14011 172 aaKnown RBP0.22□□□□□ -2.37
USP8-218ENST00000561330 IAH1Q2TAA2 248 aaPredicted RBP0.22□□□□□ -2.37
USP8-218ENST00000561330 C2orf82Q6UX34 121 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 Q8IYB0 196 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 FAM172AQ8WUF8 416 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 PRADC1Q9BSG0 188 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 RNF122Q9H9V4 155 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 PLAC8Q9NZF1 115 aa0.22□□□□□ -2.37
USP8-218ENST00000561330 SCN3AQ9NY46 2000 aa0.21□□□□□ -2.38
USP8-218ENST00000561330 IGLV3-32A0A0A0MS00 114 aa0.21□□□□□ -2.38
USP8-218ENST00000561330 hADV38S2A0JD32 116 aa0.21□□□□□ -2.38
USP8-218ENST00000561330 CYB5BO43169 146 aa0.21□□□□□ -2.38
USP8-218ENST00000561330 OMPP47874 163 aa0.21□□□□□ -2.38
USP8-218ENST00000561330 IMPG1Q17R60 797 aa0.21□□□□□ -2.38
USP8-218ENST00000561330 MAST4O15021 2626 aa0.21□□□□□ -2.38
USP8-218ENST00000561330 TNS3Q68CZ2 1445 aa0.21□□□□□ -2.38
USP8-218ENST00000561330 DOCK3Q8IZD9 2030 aa0.2□□□□□ -2.38
USP8-218ENST00000561330 ASCC3Q8N3C0 2202 aaKnown RBP0.2□□□□□ -2.38
USP8-218ENST00000561330 A0A0D9SG42 100 aa0.2□□□□□ -2.38
USP8-218ENST00000561330 HAGHLQ6PII5 290 aaPredicted RBP0.2□□□□□ -2.38
USP8-218ENST00000561330 LINC00052Q96N35 136 aa0.2□□□□□ -2.38
USP8-218ENST00000561330 TP53RKQ96S44 253 aa0.2□□□□□ -2.38
USP8-218ENST00000561330 TVP23BQ9NYZ1 205 aa0.2□□□□□ -2.38
USP8-218ENST00000561330 DOCK5Q9H7D0 1870 aa0.19□□□□□ -2.38
USP8-218ENST00000561330 TIMM17BO60830 172 aa0.19□□□□□ -2.38
USP8-218ENST00000561330 C8GP07360 202 aa0.19□□□□□ -2.38
USP8-218ENST00000561330 EIF5AP63241 154 aaKnown RBP0.19□□□□□ -2.38
USP8-218ENST00000561330 Q6Q795 121 aa0.19□□□□□ -2.38
USP8-218ENST00000561330 SLC25A40Q8TBP6 338 aa0.19□□□□□ -2.38
USP8-218ENST00000561330 LINC00467Q9BRT7 94 aa0.19□□□□□ -2.38
USP8-218ENST00000561330 TMEM133Q9H2Q1 129 aa0.19□□□□□ -2.38
USP8-218ENST00000561330 IDI2-AS1Q9NZ38 188 aa0.19□□□□□ -2.38
USP8-218ENST00000561330 ECM29Q5VYK3 1845 aa0.19□□□□□ -2.38
USP8-218ENST00000561330 TAF1LQ8IZX4 1826 aa0.19□□□□□ -2.38
USP8-218ENST00000561330 KDM6AO15550 1401 aaPredicted RBP0.19□□□□□ -2.38
USP8-218ENST00000561330 CACNA1EQ15878 2313 aa0.18□□□□□ -2.38
USP8-218ENST00000561330 CASP8AP2Q9UKL3 1982 aa0.18□□□□□ -2.38
USP8-218ENST00000561330 NAV2Q8IVL1 2488 aa0.18□□□□□ -2.38
USP8-218ENST00000561330 A0A087WUJ7 227 aa0.18□□□□□ -2.38
USP8-218ENST00000561330 M0R378 163 aa0.18□□□□□ -2.38
USP8-218ENST00000561330 KPNA3O00505 521 aaPredicted RBP0.18□□□□□ -2.38
USP8-218ENST00000561330 TRAPPC5Q8IUR0 188 aa0.18□□□□□ -2.38
USP8-218ENST00000561330 OR52L1Q8NGH7 329 aa0.18□□□□□ -2.38
USP8-218ENST00000561330 CCDC42Q96M95 316 aa0.18□□□□□ -2.38
USP8-218ENST00000561330 PSTPIP2Q9H939 334 aa0.18□□□□□ -2.38
USP8-218ENST00000561330 CHD3Q12873 2000 aaKnown RBP0.18□□□□□ -2.38
USP8-218ENST00000561330 HOXA6P31267 233 aa0.17□□□□□ -2.38
USP8-218ENST00000561330 RNASE4P34096 147 aaKnown RBP0.17□□□□□ -2.38
USP8-218ENST00000561330 SRP14P37108 136 aaKnown RBP0.17□□□□□ -2.38
USP8-218ENST00000561330 TRIM4Q9C037 500 aa0.17□□□□□ -2.38
USP8-218ENST00000561330 UQCC1Q9NVA1 299 aa0.17□□□□□ -2.38
USP8-218ENST00000561330 SCN10AQ9Y5Y9 1956 aa0.17□□□□□ -2.38
USP8-218ENST00000561330 RIMBP3CA6NJZ7 1639 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 RIMBP3BA6NNM3 1639 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 RIMBP3Q9UFD9 1639 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 NCOA1Q15788 1441 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 CD2P06729 351 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 KRTAP2-3P0C7H8 128 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 SRIP30626 198 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 DEFA3P59666 94 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 LYRM7Q5U5X0 104 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 C4orf22Q6V702 233 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 ZNF833PQ6ZTB9 187 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 GRINAQ7Z429 371 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 PSMF1Q92530 271 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 KRTAP2-4Q9BYR9 128 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 KRTAP2-1Q9BYU5 128 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 RNASE7Q9H1E1 156 aaKnown RBP0.16□□□□□ -2.38
USP8-218ENST00000561330 PCTPQ9UKL6 214 aa0.16□□□□□ -2.38
USP8-218ENST00000561330 RTL1A6NKG5 1358 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 253.1 ms