RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 LGI3Q8N145 548 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 C3orf56Q8N813 242 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 ZNF491Q8N8L2 437 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 OR10G8Q8NGN5 311 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 OR1L8Q8NGR8 309 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 OR52E5Q8NH55 327 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 CASTOR1Q8WTX7 329 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 LITAFQ99732 161 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 SPIN2AQ99865 258 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 SPIN2BQ9BPZ2 258 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 SEC22CQ9BRL7 303 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 SCRT2Q9NQ03 307 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 CACNG5Q9UF02 275 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 PRNDQ9UKY0 176 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 KCNIP3Q9Y2W7 256 aa4.54□□□□□ -1.68
LRRC28-220ENST00000561253 STAB2Q8WWQ8 2551 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 A0A1B0GU03 582 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 PRSS46E5RG02 174 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 ADAP1O75689 374 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 CNIH1O95406 144 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 PTTG1O95997 202 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 PRH1P02810 166 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 OPN1MWP04001 364 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 TRAPPC2P0DI81 140 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 TRAPPC2BP0DI82 140 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 OPN1MW2P0DN77 364 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 OPN1MW3P0DN78 364 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 AKR1C2P52895 323 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 RAB25P57735 213 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 SLC35B1P78383 322 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 DEFA5Q01523 94 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 TMEM267Q0VDI3 215 aaPredicted RBP4.53□□□□□ -1.68
LRRC28-220ENST00000561253 OXA1LQ15070 435 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 GFI1BQ5VTD9 330 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 THOC7Q6I9Y2 204 aaKnown RBP4.53□□□□□ -1.68
LRRC28-220ENST00000561253 NDUFA11Q86Y39 141 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 ZNF695Q8IW36 515 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 UXS1Q8NBZ7 420 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 OR5T1Q8NG75 326 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 OR4D5Q8NGN0 318 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 ZNF431Q8TF32 576 aaPredicted RBP4.53□□□□□ -1.68
LRRC28-220ENST00000561253 UBE2E2Q96LR5 201 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 P2RX4Q99571 388 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 GON7Q9BXV9 100 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 COMMD5Q9GZQ3 224 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 C11orf1Q9H5F2 150 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 GNB4Q9HAV0 340 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 OR51B2Q9Y5P1 312 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 TSSC4Q9Y5U2 329 aaPredicted RBP4.53□□□□□ -1.68
LRRC28-220ENST00000561253 TGP01266 2768 aa4.53□□□□□ -1.68
LRRC28-220ENST00000561253 TCRBV4S1A1TA0A5B7 111 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 SNRPGP15A8MWD9 76 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 INMT-MINDY4F8WBC2 141 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 K7EIM0 57 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 SNAPC5O75971 98 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 ATG12O94817 140 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 TMEM50AO95807 157 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 TRBV12-3P01733 135 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 REG1AP05451 166 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 SULT1A3P0DMM9 295 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 SULT1A4P0DMN0 295 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 OR13C7P0DN81 318 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 RNASE2P10153 161 aaKnown RBP4.52□□□□□ -1.69
LRRC28-220ENST00000561253 ANXA3P12429 323 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 MT3P25713 68 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 NPBWR1P48145 328 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 DEFA1P59665 94 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 DEFA3P59666 94 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 SPCS3P61009 180 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 RHOGP84095 191 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 TNFRSF9Q07011 255 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 SMCO1Q147U7 214 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 SPINK9Q5DT21 86 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 ZNF343Q6P1L6 599 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 PLET1Q6UQ28 207 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 HSD17B13Q7Z5P4 300 aaPredicted RBP4.52□□□□□ -1.69
LRRC28-220ENST00000561253 WFDC9Q8NEX5 89 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 OR4X2Q8NGF9 303 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 OR1P1Q8NH06 330 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 ENKURQ8TC29 256 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 C4orf3Q8WVX3 66 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 OR10C1Q96KK4 312 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.52□□□□□ -1.69
LRRC28-220ENST00000561253 FKBP11Q9NYL4 201 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 PYGO1Q9Y3Y4 419 aa4.52□□□□□ -1.69
LRRC28-220ENST00000561253 F11RQ9Y624 299 aaKnown RBP4.52□□□□□ -1.69
LRRC28-220ENST00000561253 ZNF320A2RRD8 509 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 A4D1N5 150 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 MFSD2BA6NFX1 497 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 E5RGE8 158 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 I3L2K1 104 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 OR2J3O76001 311 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 TRGV3P03979 118 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 LGALS1P09382 135 aaKnown RBP4.51□□□□□ -1.69
LRRC28-220ENST00000561253 RPL35AP18077 110 aaKnown RBP4.51□□□□□ -1.69
LRRC28-220ENST00000561253 PAX9P55771 341 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 TATDN3Q17R31 274 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 DEFB136Q30KP8 78 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 C15orf32Q32M92 178 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 ZFP69Q49AA0 526 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms