RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 FABP12A6NFH5 140 aa11.75□□□□□ -0.53
SNX1-213ENST00000561026 FAM90A26D6RGX4 464 aa11.75□□□□□ -0.53
SNX1-213ENST00000561026 PSG1P11464 419 aa11.75□□□□□ -0.53
SNX1-213ENST00000561026 SNRPD3P62318 126 aaKnown RBP11.75□□□□□ -0.53
SNX1-213ENST00000561026 KLF9Q13886 244 aaPredicted RBP11.75□□□□□ -0.53
SNX1-213ENST00000561026 LGI3Q8N145 548 aa11.75□□□□□ -0.53
SNX1-213ENST00000561026 RBKSQ9H477 322 aa11.75□□□□□ -0.53
SNX1-213ENST00000561026 NRN1Q9NPD7 142 aa11.75□□□□□ -0.53
SNX1-213ENST00000561026 ATP5IP56385 69 aaPredicted RBP11.74□□□□□ -0.53
SNX1-213ENST00000561026 SRPXP78539 464 aa11.74□□□□□ -0.53
SNX1-213ENST00000561026 SIGLEC15Q6ZMC9 328 aa11.74□□□□□ -0.53
SNX1-213ENST00000561026 OR51G1Q8NGK1 321 aa11.74□□□□□ -0.53
SNX1-213ENST00000561026 TBC1D24Q9ULP9 559 aa11.74□□□□□ -0.53
SNX1-213ENST00000561026 ELOA3CA0A087WX78 387 aaPredicted RBP11.73□□□□□ -0.53
SNX1-213ENST00000561026 IGLL5B9A064 214 aa11.73□□□□□ -0.53
SNX1-213ENST00000561026 H3BMQ9 156 aa11.73□□□□□ -0.53
SNX1-213ENST00000561026 ANXA3P12429 323 aa11.73□□□□□ -0.53
SNX1-213ENST00000561026 HLA-DMBP28068 263 aa11.73□□□□□ -0.53
SNX1-213ENST00000561026 PRR20EP86478 221 aa11.73□□□□□ -0.53
SNX1-213ENST00000561026 PRR20CP86479 221 aa11.73□□□□□ -0.53
SNX1-213ENST00000561026 PRR20DP86480 221 aa11.73□□□□□ -0.53
SNX1-213ENST00000561026 PRR20BP86481 221 aa11.73□□□□□ -0.53
SNX1-213ENST00000561026 PRR20AP86496 221 aa11.73□□□□□ -0.53
SNX1-213ENST00000561026 RNF125Q96EQ8 232 aa11.73□□□□□ -0.53
SNX1-213ENST00000561026 APLNQ9ULZ1 77 aa11.73□□□□□ -0.53
SNX1-213ENST00000561026 H3BMM0 161 aa11.72□□□□□ -0.53
SNX1-213ENST00000561026 GPX4P36969 197 aaPredicted RBP11.72□□□□□ -0.53
SNX1-213ENST00000561026 NUTF2P61970 127 aaKnown RBP11.72□□□□□ -0.53
SNX1-213ENST00000561026 GAMTQ14353 236 aa11.72□□□□□ -0.53
SNX1-213ENST00000561026 OR1S1Q8NH92 325 aa11.72□□□□□ -0.53
SNX1-213ENST00000561026 IGKV1D-37A0A075B6S9 117 aa11.71□□□□□ -0.53
SNX1-213ENST00000561026 PIGBOS1A0A0B4J2F0 54 aa11.71□□□□□ -0.53
SNX1-213ENST00000561026 ZFP92A6NM28 416 aa11.71□□□□□ -0.53
SNX1-213ENST00000561026 NOL3O60936 208 aaKnown RBP11.71□□□□□ -0.53
SNX1-213ENST00000561026 NUP62P37198 522 aaPredicted RBP11.71□□□□□ -0.53
SNX1-213ENST00000561026 ZNF90Q03938 601 aa11.71□□□□□ -0.53
SNX1-213ENST00000561026 OR8G2PQ6IF36 304 aa11.71□□□□□ -0.53
SNX1-213ENST00000561026 Q6ZTC4 211 aa11.71□□□□□ -0.53
SNX1-213ENST00000561026 MCFD2Q8NI22 146 aa11.71□□□□□ -0.53
SNX1-213ENST00000561026 PBDC1Q9BVG4 233 aa11.71□□□□□ -0.53
SNX1-213ENST00000561026 C1QTNF4Q9BXJ3 329 aa11.71□□□□□ -0.53
SNX1-213ENST00000561026 PFDN2Q9UHV9 154 aa11.71□□□□□ -0.53
SNX1-213ENST00000561026 PITX3O75364 302 aa11.7□□□□□ -0.54
SNX1-213ENST00000561026 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
SNX1-213ENST00000561026 NKX2-1P43699 371 aaPredicted RBP11.7□□□□□ -0.54
SNX1-213ENST00000561026 TMEM128Q5BJH2 165 aa11.7□□□□□ -0.54
SNX1-213ENST00000561026 TMED4Q7Z7H5 227 aa11.7□□□□□ -0.54
SNX1-213ENST00000561026 CENPSQ8N2Z9 138 aa11.7□□□□□ -0.54
SNX1-213ENST00000561026 SLC35E1Q96K37 410 aa11.7□□□□□ -0.54
SNX1-213ENST00000561026 XCL2Q9UBD3 114 aa11.7□□□□□ -0.54
SNX1-213ENST00000561026 TRAV10A0A0B4J240 114 aa11.69□□□□□ -0.54
SNX1-213ENST00000561026 DUXBA0A1W2PPF3 345 aa11.69□□□□□ -0.54
SNX1-213ENST00000561026 HLA-DRB4P13762 266 aa11.69□□□□□ -0.54
SNX1-213ENST00000561026 TRIM63Q969Q1 353 aa11.69□□□□□ -0.54
SNX1-213ENST00000561026 HLA-DRB4X5D2U9 266 aa11.69□□□□□ -0.54
SNX1-213ENST00000561026 SNRPGP15A8MWD9 76 aa11.68□□□□□ -0.54
SNX1-213ENST00000561026 FABP1P07148 127 aa11.68□□□□□ -0.54
SNX1-213ENST00000561026 AP3S2P59780 193 aa11.68□□□□□ -0.54
SNX1-213ENST00000561026 PYDC2Q56P42 97 aa11.68□□□□□ -0.54
SNX1-213ENST00000561026 C1orf194Q5T5A4 169 aa11.68□□□□□ -0.54
SNX1-213ENST00000561026 TOMM5Q8N4H5 51 aa11.68□□□□□ -0.54
SNX1-213ENST00000561026 LRTM2Q8N967 370 aa11.68□□□□□ -0.54
SNX1-213ENST00000561026 WDR12Q9GZL7 423 aaKnown RBP11.68□□□□□ -0.54
SNX1-213ENST00000561026 VPS13DQ5THJ4 4388 aa11.68□□□□□ -0.54
SNX1-213ENST00000561026 SLC25A6P12236 298 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 C12orf74Q32Q52 190 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 CELA1Q9UNI1 258 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 IGHV4-4A0A075B6R2 117 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 IAPPP10997 89 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 VAMP1P23763 118 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 ID1P41134 155 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 LYZP61626 148 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 RAB11AP62491 216 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 GDF5OSQ5U4N7 250 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 ZNF705AQ6ZN79 300 aaPredicted RBP11.67□□□□□ -0.54
SNX1-213ENST00000561026 LINC00052Q96N35 136 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 TRGV9Q99603 122 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 SLC25A21Q9BQT8 299 aaPredicted RBP11.67□□□□□ -0.54
SNX1-213ENST00000561026 RNF126Q9BV68 326 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 V9GYH0 126 aa11.67□□□□□ -0.54
SNX1-213ENST00000561026 DNAH10Q8IVF4 4471 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 IGKV1OR2-108A0A075B7D4 117 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 SOCS3O14543 225 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 MED6O75586 246 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 PSMB3P49720 205 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 DEFB1P60022 68 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 OR2F1Q13607 317 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 FOXI2Q6ZQN5 318 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 ZNF767PQ75MW2 155 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 DEDD2Q8WXF8 326 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 CLUHP3Q96NS8 147 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 NEU1Q99519 415 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 SAV1Q9H4B6 383 aaPredicted RBP11.66□□□□□ -0.54
SNX1-213ENST00000561026 PAIP2BQ9ULR5 123 aaKnown RBP11.66□□□□□ -0.54
SNX1-213ENST00000561026 TMED3Q9Y3Q3 217 aa11.66□□□□□ -0.54
SNX1-213ENST00000561026 DEFB131BA0A096LNP1 70 aa11.65□□□□□ -0.55
SNX1-213ENST00000561026 ZNF705FA8MVS1 300 aaPredicted RBP11.65□□□□□ -0.55
SNX1-213ENST00000561026 SFT2D2O95562 160 aa11.65□□□□□ -0.55
SNX1-213ENST00000561026 IGKV3-20P01619 116 aa11.65□□□□□ -0.55
SNX1-213ENST00000561026 ZNF705DP0CH99 300 aaPredicted RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms