RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 KRTAP10-1P60331 282 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 ZNF79Q15937 498 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 BAK1Q16611 211 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 AADACL3Q5VUY0 350 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 THOC7Q6I9Y2 204 aaKnown RBP6.68□□□□□ -1.34
HERC1-210ENST00000560897 SSX7Q7RTT5 188 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 HSD17B13Q7Z5P4 300 aaPredicted RBP6.68□□□□□ -1.34
HERC1-210ENST00000560897 OR51S1Q8NGJ8 323 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 ENKURQ8TC29 256 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 QTRT1Q9BXR0 403 aaKnown RBP6.68□□□□□ -1.34
HERC1-210ENST00000560897 Q9H3A6 140 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 VSIRQ9H7M9 311 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 CCL28Q9NRJ3 127 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 KCNIP3Q9Y2W7 256 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 RBMX2Q9Y388 322 aaKnown RBP6.68□□□□□ -1.34
HERC1-210ENST00000560897 A0A1W2PS18 150 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 CGB1A6NKQ9 187 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 K7EQG2 157 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 UPK1BO75841 260 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 ATG12O94817 140 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 CTSGP08311 255 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 ANXA3P12429 323 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 ZNF705AQ6ZN79 300 aaPredicted RBP6.67□□□□□ -1.34
HERC1-210ENST00000560897 Q6ZNX1 250 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 OR4C16Q8NGL9 310 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 MOB3AQ96BX8 217 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 ZNF486Q96H40 463 aaPredicted RBP6.67□□□□□ -1.34
HERC1-210ENST00000560897 HSD17B10Q99714 261 aaKnown RBP6.67□□□□□ -1.34
HERC1-210ENST00000560897 SLC25A21Q9BQT8 299 aaPredicted RBP6.67□□□□□ -1.34
HERC1-210ENST00000560897 BET1LQ9NYM9 111 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 ANAPC10Q9UM13 185 aa6.67□□□□□ -1.34
HERC1-210ENST00000560897 YTHDF2Q9Y5A9 579 aaKnown RBP6.67□□□□□ -1.34
HERC1-210ENST00000560897 PIGBOS1A0A0B4J2F0 54 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 LOC102723971A0A1B0GUV8 181 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 A0A1B0GVG6 124 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 ZNF705FA8MVS1 300 aaPredicted RBP6.66□□□□□ -1.34
HERC1-210ENST00000560897 LYRM1O43325 122 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 TNFSF12O43508 249 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 HBE1P02100 147 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 SERPINE2P07093 398 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 ZNF705DP0CH99 300 aaPredicted RBP6.66□□□□□ -1.34
HERC1-210ENST00000560897 ZNF705BP0CI00 300 aaPredicted RBP6.66□□□□□ -1.34
HERC1-210ENST00000560897 EIF2B2P49770 351 aaKnown RBP6.66□□□□□ -1.34
HERC1-210ENST00000560897 UCP3P55916 312 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 HAMPP81172 84 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 KLF9Q13886 244 aaPredicted RBP6.66□□□□□ -1.34
HERC1-210ENST00000560897 SURF2Q15527 256 aaPredicted RBP6.66□□□□□ -1.34
HERC1-210ENST00000560897 MSMO1Q15800 293 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 PHLDA2Q53GA4 152 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 PSMG4Q5JS54 123 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 FAAP20Q6NZ36 180 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 TMED4Q7Z7H5 227 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 RNASE11Q8TAA1 199 aaKnown RBP6.66□□□□□ -1.34
HERC1-210ENST00000560897 MARCH1Q8TCQ1 289 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 NARS2Q96I59 477 aaKnown RBP6.66□□□□□ -1.34
HERC1-210ENST00000560897 RAB40CQ96S21 281 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
HERC1-210ENST00000560897 F11RQ9Y624 299 aaKnown RBP6.66□□□□□ -1.34
HERC1-210ENST00000560897 HELTA6NFD8 242 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 F5H768 121 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 GNG7O60262 68 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 APOHP02749 345 aaPredicted RBP6.65□□□□□ -1.34
HERC1-210ENST00000560897 TRAPPC2P0DI81 140 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 TRAPPC2BP0DI82 140 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 AKR1C4P17516 323 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 GCSHP23434 173 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 MFAP4P55083 255 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 PIGPP57054 158 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 LINC00315P59091 139 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 TAS2R31P59538 309 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 ERVK-16P61578 105 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 RPL30P62888 115 aaKnown RBP6.65□□□□□ -1.34
HERC1-210ENST00000560897 TRIM16LQ309B1 348 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 C16orf54Q6UWD8 224 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 OR10W1Q8NGF6 305 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 OR4D10Q8NGI6 311 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 OR51H1Q8NH63 302 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 HINT2Q9BX68 163 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 FNDC4Q9H6D8 234 aaPredicted RBP6.65□□□□□ -1.34
HERC1-210ENST00000560897 ZNF586Q9NXT0 402 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 GOLT1BQ9Y3E0 138 aa6.65□□□□□ -1.34
HERC1-210ENST00000560897 IGKV1D-13A0A0B4J2D9 117 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 K7EIM0 57 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 PGLYRP1O75594 196 aaPredicted RBP6.64□□□□□ -1.35
HERC1-210ENST00000560897 B3GALNT1O75752 331 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 IGKV1-13P0DP09 117 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 SNRPD3P62318 126 aaKnown RBP6.64□□□□□ -1.35
HERC1-210ENST00000560897 DHRS2Q13268 280 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 RRN3P1Q2M238 152 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 TOMM20LQ6UXN7 152 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 ZNF818PQ6ZRF7 136 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 TBC1D26Q86UD7 250 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 SPAG16Q8N0X2 631 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 LSM10Q969L4 123 aaKnown RBP6.64□□□□□ -1.35
HERC1-210ENST00000560897 TXN2Q99757 166 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 MAGT1Q9H0U3 335 aa6.64□□□□□ -1.35
HERC1-210ENST00000560897 C3orf85A0A1B0GTC6 90 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 PFDN1O60925 122 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 HPRT1P00492 218 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms