RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 IGKV1D-12P01611 117 aa10.91□□□□□ -0.66
CSPG4P11-201ENST00000560634 SIGLEC15Q6ZMC9 328 aa10.91□□□□□ -0.66
CSPG4P11-201ENST00000560634 TRGV9Q99603 122 aa10.91□□□□□ -0.66
CSPG4P11-201ENST00000560634 RPRMLQ8N4K4 120 aa10.91□□□□□ -0.66
CSPG4P11-201ENST00000560634 EVI2AP22794 236 aa10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 GAS1P54826 345 aa10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 ZFAND6Q6FIF0 208 aa10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 SPSB3Q6PJ21 355 aa10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 RPP25LQ8N5L8 163 aaKnown RBP10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 DICER1Q9UPY3 1922 aaKnown RBP10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 KIF26BQ2KJY2 2108 aa10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 IGHV1-18A0A0C4DH31 117 aa10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 TMEM8BA6NDV4 472 aa10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 NMSQ5H8A3 153 aa10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 RALGAPA1Q6GYQ0 2036 aa10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 E9PLN8 166 aa10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 TCRAP04437 139 aa10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 SUPT4H1P63272 117 aaKnown RBP10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 MBNL3Q9NUK0 354 aaKnown RBP10.9□□□□□ -0.66
CSPG4P11-201ENST00000560634 MYO16Q9Y6X6 1858 aa10.9□□□□□ -0.67
CSPG4P11-201ENST00000560634 IGHV1-46P01743 117 aa10.9□□□□□ -0.67
CSPG4P11-201ENST00000560634 CDKN1AP38936 164 aa10.9□□□□□ -0.67
CSPG4P11-201ENST00000560634 LINC00158P58513 81 aa10.9□□□□□ -0.67
CSPG4P11-201ENST00000560634 S100A7L2Q5SY68 101 aa10.9□□□□□ -0.67
CSPG4P11-201ENST00000560634 BCL6BQ8N143 479 aaPredicted RBP10.9□□□□□ -0.67
CSPG4P11-201ENST00000560634 MRPL27Q9P0M9 148 aaKnown RBP10.9□□□□□ -0.67
CSPG4P11-201ENST00000560634 LRRC37AA6NMS7 1700 aa10.9□□□□□ -0.67
CSPG4P11-201ENST00000560634 PMS2P5A8MQ11 134 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 ZNF688P0C7X2 276 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 DTX1Q86Y01 620 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 JPT2Q9H910 190 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 SCN4AP35499 1836 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 C9orf139Q6ZV77 190 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 FLVCR1-AS1Q8TAF5 88 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 OTOFQ9HC10 1997 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 DOCK5Q9H7D0 1870 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 TRAV5A0A0B4J249 113 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 TRAV41A0A0B4J266 112 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 LGALS1P09382 135 aaKnown RBP10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 PSG1P11464 419 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 LYPD1Q8N2G4 141 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 SLC25A39Q9BZJ4 359 aaPredicted RBP10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 WNK3Q9BYP7 1800 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 CSRP1P21291 193 aaKnown RBP10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 ZNF138P52744 262 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 SCN2AQ99250 2005 aa10.89□□□□□ -0.67
CSPG4P11-201ENST00000560634 VCYO14598 125 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 TDGF1P3P51864 188 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 RIPPLY3P57055 190 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 KLF17Q5JT82 389 aaPredicted RBP10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 OR10W1Q8NGF6 305 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 CREBBPQ92793 2442 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 A0A087WV48 116 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 ZFP36L1Q07352 338 aaKnown RBP10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 MINOS1Q5TGZ0 78 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 MINOS1-NBL1R4GNA1 71 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 PLXNB2O15031 1838 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 WNK2Q9Y3S1 2297 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 TRBV6-6A0A0A6YYG2 114 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 IL18BPO95998 194 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 PRADC1Q9BSG0 188 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 D6R8Y8 96 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 CD24P25063 80 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 RPL36AP83881 106 aaKnown RBP10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 RASL10AQ92737 203 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 RPL36ALQ969Q0 106 aaKnown RBP10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 ARFGEF1Q9Y6D6 1849 aa10.88□□□□□ -0.67
CSPG4P11-201ENST00000560634 A0A087WX48 190 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 CFHR1Q03591 330 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 LINC00477Q96M19 166 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 ZNF876PQ49A33 203 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 GTSCR1Q86UQ5 136 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 OVOL2Q9BRP0 275 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 DPH3P1Q9H4G8 78 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 A0A1W2PRX2 142 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 SRSF4Q08170 494 aaKnown RBP10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 NEUROG3Q9Y4Z2 214 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 IGHV2-26A0A0B4J1V2 119 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 TOMM40O96008 361 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 DSCR9P59020 149 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 GUSBP1Q15486 140 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 LYZL1Q6UWQ5 148 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 NABP1Q96AH0 204 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 VGLL1Q99990 258 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 CST9LQ9H4G1 147 aa10.87□□□□□ -0.67
CSPG4P11-201ENST00000560634 C15orf32Q32M92 178 aa10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 ACTL10Q5JWF8 245 aa10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 MGST2Q99735 147 aa10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 PLSCR4Q9NRQ2 329 aa10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 A0A0U1RRA0 63 aa10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 IGKV1-5P01602 117 aa10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 FGFBP3Q8TAT2 258 aa10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 DLX4Q92988 240 aaPredicted RBP10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 TEX43Q6ZNM6 134 aa10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 METRNQ9UJH8 293 aa10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 IGHV1-8P0DP01 117 aa10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 C10orf55Q5SWW7 151 aa10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 ZCCHC24Q8N2G6 241 aaKnown RBP10.86□□□□□ -0.67
CSPG4P11-201ENST00000560634 FNDC10F2Z333 226 aa10.85□□□□□ -0.67
CSPG4P11-201ENST00000560634 RFNGQ9Y644 331 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms