RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 ST6GALNAC6Q969X2 333 aa4.81□□□□□ -1.64
SNRPA1-209ENST00000560307 COQ2Q96H96 371 aa4.81□□□□□ -1.64
SNRPA1-209ENST00000560307 PRSS22Q9GZN4 317 aa4.81□□□□□ -1.64
SNRPA1-209ENST00000560307 RPP21Q9H633 154 aaKnown RBP4.81□□□□□ -1.64
SNRPA1-209ENST00000560307 HIGD1BQ9P298 99 aa4.81□□□□□ -1.64
SNRPA1-209ENST00000560307 PRNDQ9UKY0 176 aa4.81□□□□□ -1.64
SNRPA1-209ENST00000560307 AMMECR1Q9Y4X0 333 aaPredicted RBP4.81□□□□□ -1.64
SNRPA1-209ENST00000560307 KLF12Q9Y4X4 402 aa4.81□□□□□ -1.64
SNRPA1-209ENST00000560307 HLA-DRB4X5D2U9 266 aa4.81□□□□□ -1.64
SNRPA1-209ENST00000560307 ARHGAP21Q5T5U3 1957 aa4.81□□□□□ -1.64
SNRPA1-209ENST00000560307 CENPFP49454 3210 aa4.81□□□□□ -1.64
SNRPA1-209ENST00000560307 A0A087X0K7 114 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 TEX50A0A1B0GTY4 177 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 C19orf71A6NCJ1 209 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 SRRM4A7MD48 611 aaKnown RBP4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 C15orf65H3BRN8 121 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 PRYO14603 147 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 FCGR3BO75015 233 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 APOA2P02652 100 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 FABP2P12104 132 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 ZFP36P26651 326 aaKnown RBP4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 MYCNOSP40205 109 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 DUSP3P51452 185 aaPredicted RBP4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 FOXA3P55318 350 aaPredicted RBP4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 UBE2L3P68036 154 aaKnown RBP4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 SLC35B1P78383 322 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 PRCDQ00LT1 54 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 CFHR3Q02985 330 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 SCGB2A2Q13296 93 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 TBC1D28Q2M2D7 210 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 SPINK9Q5DT21 86 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 Q6AWC8 147 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 WDR82Q6UXN9 313 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 RBPMS2Q6ZRY4 209 aaKnown RBP4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 WDR86Q86TI4 376 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 ZNF329Q86UD4 541 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 C1orf210Q8IVY1 113 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 RPRMLQ8N4K4 120 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 TPRX1Q8N7U7 411 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 LRRC29Q8WV35 223 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 FMC1Q96HJ9 113 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 FAM167A-AS1Q96KT0 104 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 ZNF48Q96MX3 618 aaPredicted RBP4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 S1PR3Q99500 378 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 PRRG4Q9BZD6 226 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 ZNF355PQ9NSJ1 428 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 SPCS1Q9Y6A9 102 aa4.8□□□□□ -1.64
SNRPA1-209ENST00000560307 PPIAL4DF5H284 164 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 F8W1H4 67 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 H3BUT2 72 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 FOLR3P41439 243 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 MZT1Q08AG7 82 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 ANXA2RQ3ZCQ2 193 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 ACP7Q6ZNF0 438 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 Q6ZS92 163 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 YRDCQ86U90 279 aaKnown RBP4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 ABHD12Q8N2K0 398 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 GCSAMQ8N6F7 178 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 OR4A5Q8NH83 315 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 C8orf46Q8TAG6 207 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 FAM110DQ8TAY7 271 aaPredicted RBP4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 FER1L6-AS2Q96M78 137 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 WWC2-AS2Q96NR7 200 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 GPR82Q96P67 336 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 PAXXQ9BUH6 204 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 ZNF747Q9BV97 191 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 MLST8Q9BVC4 326 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 SLC25A2Q9BXI2 301 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 CXXC4Q9H2H0 198 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 IFI27L2Q9H2X8 130 aa4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 FNDC4Q9H6D8 234 aaPredicted RBP4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 BOKQ9UMX3 212 aaPredicted RBP4.79□□□□□ -1.64
SNRPA1-209ENST00000560307 PPIAL4EA0A075B759 164 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 PPIAL4CA0A0B4J2A2 164 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 A0A1W2PQM1 296 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 CHEK1O14757 476 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 P01737 135 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 PPIAL4FP0DN26 164 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 AZU1P20160 251 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 S100A7P31151 101 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 CAMPP49913 170 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 SRSF1Q07955 248 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 RIGQ13278 110 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 IL11RAQ14626 422 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 TAL2Q16559 108 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 ADAMTSL5Q6ZMM2 481 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 SLC25A48Q6ZT89 311 aaKnown RBP4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 LINC00173Q6ZV60 143 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 ERASQ7Z444 233 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 ZADH2Q8N4Q0 377 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 THAP8Q8NA92 274 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 TSTD1Q8NFU3 115 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 OR10W1Q8NGF6 305 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 OR13A1Q8NGR1 328 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 OR9G1Q8NH87 305 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 UBALD1Q8TB05 177 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 ZNF502Q8TBZ5 544 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 CT55Q8WUE5 264 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 BADQ92934 168 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms