RNA–Protein interactions for RNA: ENST00000560262.5

NEO1-207, Transcript of neogenin 1, humanhuman

TSL 1 (best) BASIC

Gene NEO1, Length 4,315 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-207ENST00000560262 IL36BQ9NZH7 164 aa13.18□□□□□ -0.3
NEO1-207ENST00000560262 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
NEO1-207ENST00000560262 DYSFO75923 2080 aa13.18□□□□□ -0.3
NEO1-207ENST00000560262 C3orf36Q3SXR2 165 aa13.18□□□□□ -0.3
NEO1-207ENST00000560262 USP9YO00507 2555 aaPredicted RBP13.18□□□□□ -0.3
NEO1-207ENST00000560262 WIPF3A6NGB9 483 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 WISP2O76076 250 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 GLMPQ8WWB7 406 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 CDC42EP3Q9UKI2 254 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 SETD2Q9BYW2 2564 aaPredicted RBP13.17□□□□□ -0.3
NEO1-207ENST00000560262 STAG3L2P0CL84 134 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 STAG3L3P0CL85 134 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 CFHR2P36980 270 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 ITLN2Q8WWU7 325 aaPredicted RBP13.17□□□□□ -0.3
NEO1-207ENST00000560262 RNF5Q99942 180 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 CEACAM4O75871 244 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 MGST2Q99735 147 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 EPDR1Q9UM22 224 aa13.17□□□□□ -0.3
NEO1-207ENST00000560262 USP9XQ93008 2570 aaPredicted RBP13.16□□□□□ -0.3
NEO1-207ENST00000560262 C2CD3Q4AC94 2353 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 A0A1B0GUT8 65 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 LOXP28300 417 aaPredicted RBP13.16□□□□□ -0.3
NEO1-207ENST00000560262 SP5Q6BEB4 398 aaPredicted RBP13.16□□□□□ -0.3
NEO1-207ENST00000560262 OCC1Q8TAD7 63 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 Q8TCH9 128 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 ATG101Q9BSB4 218 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 MAP1LC3AQ9H492 121 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 PMS2P5A8MQ11 134 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 MMP23AO75900 390 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 VDAC2P45880 294 aaPredicted RBP13.16□□□□□ -0.3
NEO1-207ENST00000560262 IGF2-ASQ6U949 168 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 A0A1B0GWJ7 208 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 PAX8Q06710 450 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 ZNF329Q86UD4 541 aa13.16□□□□□ -0.3
NEO1-207ENST00000560262 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
NEO1-207ENST00000560262 TRBV20OR9-2A0A075B6H5 130 aa13.15□□□□□ -0.3
NEO1-207ENST00000560262 SRSF4Q08170 494 aaKnown RBP13.15□□□□□ -0.3
NEO1-207ENST00000560262 OTORQ9NRC9 128 aa13.15□□□□□ -0.3
NEO1-207ENST00000560262 JMJD1CQ15652 2540 aa13.15□□□□□ -0.3
NEO1-207ENST00000560262 A6NNC1 897 aa13.15□□□□□ -0.3
NEO1-207ENST00000560262 UQCRFS1P47985 274 aa13.15□□□□□ -0.3
NEO1-207ENST00000560262 ANAPC10Q9UM13 185 aa13.15□□□□□ -0.3
NEO1-207ENST00000560262 HIGD1CA8MV81 97 aa13.15□□□□□ -0.3
NEO1-207ENST00000560262 TMEM50AO95807 157 aa13.15□□□□□ -0.3
NEO1-207ENST00000560262 HERVK_113P61574 105 aa13.15□□□□□ -0.3
NEO1-207ENST00000560262 TMEM136Q6ZRR5 245 aa13.15□□□□□ -0.3
NEO1-207ENST00000560262 CIARTQ8N365 385 aaPredicted RBP13.15□□□□□ -0.3
NEO1-207ENST00000560262 F11RQ9Y624 299 aaKnown RBP13.15□□□□□ -0.3
NEO1-207ENST00000560262 IFITM10A6NMD0 228 aa13.15□□□□□ -0.31
NEO1-207ENST00000560262 SCGB1C2P0DMR2 95 aa13.15□□□□□ -0.31
NEO1-207ENST00000560262 SRD5A1P18405 259 aa13.15□□□□□ -0.31
NEO1-207ENST00000560262 CDX1P47902 265 aaPredicted RBP13.15□□□□□ -0.31
NEO1-207ENST00000560262 ZNF56Q15929 161 aa13.15□□□□□ -0.31
NEO1-207ENST00000560262 C8orf46Q8TAG6 207 aa13.15□□□□□ -0.31
NEO1-207ENST00000560262 ZNF502Q8TBZ5 544 aa13.15□□□□□ -0.31
NEO1-207ENST00000560262 FMC1Q96HJ9 113 aa13.15□□□□□ -0.31
NEO1-207ENST00000560262 SCRT1Q9BWW7 348 aa13.15□□□□□ -0.31
NEO1-207ENST00000560262 NDUFS7O75251 213 aa13.14□□□□□ -0.31
NEO1-207ENST00000560262 RPP21Q9H633 154 aaKnown RBP13.14□□□□□ -0.31
NEO1-207ENST00000560262 NMUP48645 174 aa13.14□□□□□ -0.31
NEO1-207ENST00000560262 ITGB1BP1O14713 200 aa13.14□□□□□ -0.31
NEO1-207ENST00000560262 RPL15P61313 204 aaKnown RBP13.14□□□□□ -0.31
NEO1-207ENST00000560262 AP5S1Q9NUS5 200 aa13.14□□□□□ -0.31
NEO1-207ENST00000560262 CD5P06127 495 aa13.13□□□□□ -0.31
NEO1-207ENST00000560262 RNASE2P10153 161 aaKnown RBP13.13□□□□□ -0.31
NEO1-207ENST00000560262 AGMATQ9BSE5 352 aa13.13□□□□□ -0.31
NEO1-207ENST00000560262 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
NEO1-207ENST00000560262 NUDT3O95989 172 aa13.13□□□□□ -0.31
NEO1-207ENST00000560262 A0A087WWC5 75 aa13.13□□□□□ -0.31
NEO1-207ENST00000560262 RNF223E7ERA6 249 aa13.13□□□□□ -0.31
NEO1-207ENST00000560262 NUTF2P61970 127 aaKnown RBP13.13□□□□□ -0.31
NEO1-207ENST00000560262 SRSF9Q13242 221 aaKnown RBP eCLIP13.13□□□□□ -0.31
NEO1-207ENST00000560262 C17orf58Q2M2W7 97 aa13.13□□□□□ -0.31
NEO1-207ENST00000560262 A0A1W2PPI3 338 aa13.12□□□□□ -0.31
NEO1-207ENST00000560262 NPIPB6E9PJ23 425 aa13.12□□□□□ -0.31
NEO1-207ENST00000560262 M0R143 59 aa13.12□□□□□ -0.31
NEO1-207ENST00000560262 SLC50A1Q9BRV3 221 aa13.12□□□□□ -0.31
NEO1-207ENST00000560262 PSG8Q9UQ74 426 aa13.12□□□□□ -0.31
NEO1-207ENST00000560262 CD33P20138 364 aa13.12□□□□□ -0.31
NEO1-207ENST00000560262 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.12□□□□□ -0.31
NEO1-207ENST00000560262 CA1P00915 261 aaPredicted RBP13.12□□□□□ -0.31
NEO1-207ENST00000560262 EXOC3-AS1Q8N2X6 119 aa13.12□□□□□ -0.31
NEO1-207ENST00000560262 FABP5P3A8MUU1 101 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 IGKV1-39P01597 117 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 IGKV1D-39P04432 117 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 SOD3P08294 240 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 ZNF134P52741 427 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 OR10AG1Q8NH19 301 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 MED12LQ86YW9 2145 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 TRAV1-1A0A0B4J248 108 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 DERL1Q9BUN8 251 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 SLC25A39Q9BZJ4 359 aaPredicted RBP13.11□□□□□ -0.31
NEO1-207ENST00000560262 FGF23Q9GZV9 251 aaPredicted RBP13.11□□□□□ -0.31
NEO1-207ENST00000560262 ASIPP42127 132 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 RUSC1-AS1Q66K80 236 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 DENND4AQ7Z401 1863 aa13.11□□□□□ -0.31
NEO1-207ENST00000560262 MSMBP08118 114 aa13.1□□□□□ -0.31
NEO1-207ENST00000560262 TCF23Q7RTU1 214 aa13.1□□□□□ -0.31
NEO1-207ENST00000560262 FER1L6-AS1Q8NA97 138 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms