RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ZFP82Q8N141 532 aa14.08□□□□□ -0.16
SNX1-208ENST00000559844 DYNAPQ8N1N2 210 aa14.08□□□□□ -0.16
SNX1-208ENST00000559844 ZNF503Q96F45 646 aa14.08□□□□□ -0.16
SNX1-208ENST00000559844 WNT10AQ9GZT5 417 aa14.08□□□□□ -0.16
SNX1-208ENST00000559844 URGCP-MRPS24S4R325 110 aa14.08□□□□□ -0.16
SNX1-208ENST00000559844 SCO2A0A1W2PP80 73 aa14.07□□□□□ -0.16
SNX1-208ENST00000559844 H7BYZ3 331 aa14.07□□□□□ -0.16
SNX1-208ENST00000559844 FAM106CPP0CH98 169 aa14.07□□□□□ -0.16
SNX1-208ENST00000559844 IGHV4-38-2P0DP08 117 aa14.07□□□□□ -0.16
SNX1-208ENST00000559844 TMEM11P17152 192 aa14.07□□□□□ -0.16
SNX1-208ENST00000559844 CD24P25063 80 aa14.07□□□□□ -0.16
SNX1-208ENST00000559844 FAM120AOSQ5T036 256 aa14.07□□□□□ -0.16
SNX1-208ENST00000559844 ZNF562Q6V9R5 426 aa14.07□□□□□ -0.16
SNX1-208ENST00000559844 C16orf82Q7Z2V1 217 aa14.07□□□□□ -0.16
SNX1-208ENST00000559844 SLC25A2Q9BXI2 301 aa14.07□□□□□ -0.16
SNX1-208ENST00000559844 CENPVL3A0A0U1RRI6 287 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 A0A1W2PRE2 83 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 I3L2K1 104 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 TGOLN2O43493 480 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 BRS3P32247 399 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 RPS10P46783 165 aaKnown RBP14.06□□□□□ -0.16
SNX1-208ENST00000559844 KLF17Q5JT82 389 aaPredicted RBP14.06□□□□□ -0.16
SNX1-208ENST00000559844 PATE2Q6UY27 113 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 C19orf35Q6ZS72 473 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 IL17RELQ6ZVW7 336 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 LINC01551Q86U37 167 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 FAM167A-AS1Q96KT0 104 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 OR5B12Q96R08 314 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 ZNF355PQ9NSJ1 428 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 C1RLQ9NZP8 487 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 DMRT1Q9Y5R6 373 aa14.06□□□□□ -0.16
SNX1-208ENST00000559844 CXCL1P09341 107 aa14.05□□□□□ -0.16
SNX1-208ENST00000559844 S100PP25815 95 aa14.05□□□□□ -0.16
SNX1-208ENST00000559844 OR5AU1Q8NGC0 362 aa14.05□□□□□ -0.16
SNX1-208ENST00000559844 C2CD4CQ8TF44 421 aa14.05□□□□□ -0.16
SNX1-208ENST00000559844 SAV1Q9H4B6 383 aaPredicted RBP14.05□□□□□ -0.16
SNX1-208ENST00000559844 TGIF2-C20orf24A0A0A6YYL0 155 aa14.05□□□□□ -0.16
SNX1-208ENST00000559844 NCBP2LA6PVI3 153 aaKnown RBP14.05□□□□□ -0.16
SNX1-208ENST00000559844 PLP1P60201 277 aa14.05□□□□□ -0.16
SNX1-208ENST00000559844 UBE2L3P68036 154 aaKnown RBP14.05□□□□□ -0.16
SNX1-208ENST00000559844 STXBP6Q8NFX7 210 aa14.05□□□□□ -0.16
SNX1-208ENST00000559844 ARPC1AQ92747 370 aa14.05□□□□□ -0.16
SNX1-208ENST00000559844 DERL1Q9BUN8 251 aa14.05□□□□□ -0.16
SNX1-208ENST00000559844 NAV3Q8IVL0 2385 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 TRBV24-1A0A075B6N3 115 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 IGHV1-69DA0A0B4J2H0 117 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 NPIPB5A8MRT5 1133 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 PPP1R2P9O14990 202 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 IGHV1-69P01742 117 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 FABP1P07148 127 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 RUSC1-AS1Q66K80 236 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 BRD3OSQ6XYD6 125 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 FAM210BQ96KR6 192 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 PAXXQ9BUH6 204 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 LY96Q9Y6Y9 160 aa14.04□□□□□ -0.16
SNX1-208ENST00000559844 IGHV3-21A0A0B4J1V1 117 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 TRAV5A0A0B4J249 113 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 C9JCJ5 164 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 HYPMO75409 117 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 S100A6P06703 90 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 CX3CL1P78423 397 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 LINC00305Q7Z4B0 112 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 SSX3Q99909 188 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 OR51M1Q9H341 326 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 TMEM160Q9NX00 188 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 MTORP42345 2549 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 NPFFO15130 113 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 OR10J4P0C629 311 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 ORM2P19652 201 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 HNF1AP20823 631 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 SAA4P35542 130 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 GALR1P47211 349 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 MORN5Q5VZ52 161 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 TEX29Q8N6K0 151 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 OR1B1Q8NGR6 318 aa14.03□□□□□ -0.16
SNX1-208ENST00000559844 FSHBP01225 129 aa14.02□□□□□ -0.16
SNX1-208ENST00000559844 IGLC1P0CG04 106 aa14.02□□□□□ -0.16
SNX1-208ENST00000559844 SMUG1Q53HV7 270 aa14.02□□□□□ -0.16
SNX1-208ENST00000559844 FBLN7Q53RD9 439 aa14.02□□□□□ -0.16
SNX1-208ENST00000559844 PIP4P2Q8N4L2 257 aa14.02□□□□□ -0.16
SNX1-208ENST00000559844 NSD1Q96L73 2696 aaPredicted RBP14.02□□□□□ -0.17
SNX1-208ENST00000559844 PFN1P07737 140 aaKnown RBP14.02□□□□□ -0.17
SNX1-208ENST00000559844 SRP14P37108 136 aaKnown RBP14.02□□□□□ -0.17
SNX1-208ENST00000559844 TTC9CQ8N5M4 171 aa14.02□□□□□ -0.17
SNX1-208ENST00000559844 OR5T1Q8NG75 326 aa14.02□□□□□ -0.17
SNX1-208ENST00000559844 AJUBAQ96IF1 538 aa14.02□□□□□ -0.17
SNX1-208ENST00000559844 RASL11BQ9BPW5 248 aa14.02□□□□□ -0.17
SNX1-208ENST00000559844 FAM103A1Q9BTL3 118 aaKnown RBP14.02□□□□□ -0.17
SNX1-208ENST00000559844 MDFIC2A0A1B0GVS7 189 aa14.01□□□□□ -0.17
SNX1-208ENST00000559844 K7EIM0 57 aa14.01□□□□□ -0.17
SNX1-208ENST00000559844 INAFM1C9JVW0 142 aa14□□□□□ -0.17
SNX1-208ENST00000559844 SUMO1P63165 101 aaKnown RBP14□□□□□ -0.17
SNX1-208ENST00000559844 KCNIP4Q6PIL6 250 aa14□□□□□ -0.17
SNX1-208ENST00000559844 Q8N9W7 124 aa14□□□□□ -0.17
SNX1-208ENST00000559844 RBM14Q96PK6 669 aaKnown RBP14□□□□□ -0.17
SNX1-208ENST00000559844 PYGO2Q9BRQ0 406 aa14□□□□□ -0.17
SNX1-208ENST00000559844 TCEAL7Q9BRU2 100 aa14□□□□□ -0.17
SNX1-208ENST00000559844 TEP1Q99973 2627 aaKnown RBP14□□□□□ -0.17
SNX1-208ENST00000559844 TRBV20OR9-2A0A075B6H5 130 aa14□□□□□ -0.17
SNX1-208ENST00000559844 TRAV30A0A087WSZ9 112 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms