RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 ST8SIA3O43173 380 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 ADAP1O75689 374 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 REG1AP05451 166 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 SEC11BP0C7V7 166 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 PVALBP20472 110 aaPredicted RBP4.3□□□□□ -1.72
USP3-215ENST00000559771 RPL12P30050 165 aaKnown RBP4.3□□□□□ -1.72
USP3-215ENST00000559771 ARL3P36405 182 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 RAB32Q13637 225 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 MSMO1Q15800 293 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 GUCA2BQ16661 112 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 GGNBP1Q5YKI7 109 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 CLEC19AQ6UXS0 136 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 SVBPQ8N300 66 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 DYNLRB2Q8TF09 96 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 GLYATL2Q8WU03 294 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 OR10C1Q96KK4 312 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 TMEM222Q9H0R3 208 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 ARV1Q9H2C2 271 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 FAM212BQ9NTI7 297 aaPredicted RBP4.3□□□□□ -1.72
USP3-215ENST00000559771 GSKIPQ9P0R6 139 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 OR2W1Q9Y3N9 320 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 RBM7Q9Y580 266 aaKnown RBP4.3□□□□□ -1.72
USP3-215ENST00000559771 PCLOQ9Y6V0 5065 aa4.3□□□□□ -1.72
USP3-215ENST00000559771 TRAV3A0A0B4J244 114 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 A0A0J9YWU9 116 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 C3orf85A0A1B0GTC6 90 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 IGLC7A0M8Q6 106 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 TMEM218A2RU14 115 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 UMAD1C9J7I0 102 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 ZNF561-AS1K7EIQ3 104 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 SCAF4O95104 1147 aaKnown RBP4.29□□□□□ -1.72
USP3-215ENST00000559771 S1PR2O95136 353 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 CLEC3BP05452 202 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 HOXB5P09067 269 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 OR5AC1P0C628 307 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 UCP1P25874 307 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 GNRHRP30968 328 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 RPL27AP46776 148 aaKnown RBP4.29□□□□□ -1.72
USP3-215ENST00000559771 SULT1A2P50226 295 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 CAV2P51636 162 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 MFAP2P55001 183 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 OR2B8PP59922 312 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 BAXQ07812 192 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 ZNF266Q14584 549 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 FAM209BQ5JX69 171 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 C10orf91Q5T1B1 145 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 BTNL8Q6UX41 500 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 RPP25LQ8N5L8 163 aaKnown RBP4.29□□□□□ -1.72
USP3-215ENST00000559771 ZBTB34Q8NCN2 500 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 LYPD6BQ8NI32 183 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 LHFPL5Q8TAF8 219 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 ZNF502Q8TBZ5 544 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 RRNAD1Q96FB5 475 aaKnown RBP4.29□□□□□ -1.72
USP3-215ENST00000559771 CXorf58Q96LI9 332 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 LINC00052Q96N35 136 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 GGTLC1Q9BX51 225 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 SEC11CQ9BY50 192 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 SLC25A31Q9H0C2 315 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 OR5AC2Q9NZP5 309 aa4.29□□□□□ -1.72
USP3-215ENST00000559771 CARHSP1Q9Y2V2 147 aaKnown RBP4.29□□□□□ -1.72
USP3-215ENST00000559771 STRAPQ9Y3F4 350 aaKnown RBP4.29□□□□□ -1.72
USP3-215ENST00000559771 LOC102724200A0A096LPH7 203 aaPredicted RBP4.28□□□□□ -1.72
USP3-215ENST00000559771 IGHV3-35A0A0C4DH35 117 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 A0A1B0GU03 582 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 ZNF320A2RRD8 509 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 ZNF705EA8MWA4 302 aaPredicted RBP4.28□□□□□ -1.72
USP3-215ENST00000559771 ACTL6BO94805 426 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 ATG12O94817 140 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 LY6G6CO95867 125 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 MBPP02686 304 aaPredicted RBP4.28□□□□□ -1.72
USP3-215ENST00000559771 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 MAS1LP35410 378 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 S100A10P60903 97 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 RPL8P62917 257 aaKnown RBP4.28□□□□□ -1.72
USP3-215ENST00000559771 WT1-ASQ06250 92 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 TNFRSF9Q07011 255 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 POU2AF1Q16633 256 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 ODF3L2Q3SX64 289 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 ZNF585BQ52M93 769 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 TMEM268Q5VZI3 342 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 OR4A47Q6IF82 309 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 DPPA3Q6W0C5 159 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 SSX9Q7RTT3 188 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 OR10W1Q8NGF6 305 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 OR4D5Q8NGN0 318 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 OR4S2Q8NH73 311 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 VSTM2AQ8TAG5 236 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 TCTEX1D2Q8WW35 142 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 LSM10Q969L4 123 aaKnown RBP4.28□□□□□ -1.72
USP3-215ENST00000559771 HSD17B10Q99714 261 aaKnown RBP4.28□□□□□ -1.72
USP3-215ENST00000559771 GINS3Q9BRX5 216 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 CCL28Q9NRJ3 127 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 BET1LQ9NYM9 111 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 CACFD1Q9UGQ2 172 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 PRELID3BQ9Y3B1 194 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 KIAA1109Q2LD37 5005 aa4.28□□□□□ -1.72
USP3-215ENST00000559771 TRBV7-1A0A0A6YYK4 115 aa4.27□□□□□ -1.73
USP3-215ENST00000559771 TRAV25A0A0B4J276 109 aa4.27□□□□□ -1.73
USP3-215ENST00000559771 FAM90A26D6RGX4 464 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms