RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 CX3CL1P78423 397 aa12.59□□□□□ -0.39
USP8-208ENST00000559329 OR5I1Q13606 314 aa12.59□□□□□ -0.39
USP8-208ENST00000559329 TIGITQ495A1 244 aa12.59□□□□□ -0.39
USP8-208ENST00000559329 COA6Q5JTJ3 125 aaKnown RBP12.59□□□□□ -0.39
USP8-208ENST00000559329 SLC17A3O00476 420 aa12.58□□□□□ -0.39
USP8-208ENST00000559329 ARPC1AQ92747 370 aa12.58□□□□□ -0.39
USP8-208ENST00000559329 OSTCQ9NRP0 149 aa12.58□□□□□ -0.39
USP8-208ENST00000559329 PITPNC1Q9UKF7 332 aa12.58□□□□□ -0.39
USP8-208ENST00000559329 POLR3KQ9Y2Y1 108 aaPredicted RBP12.58□□□□□ -0.39
USP8-208ENST00000559329 IGLV11-55A0A075B6I3 123 aa12.58□□□□□ -0.4
USP8-208ENST00000559329 A0A0U1RQK1 487 aa12.58□□□□□ -0.4
USP8-208ENST00000559329 ZNF320A2RRD8 509 aa12.58□□□□□ -0.4
USP8-208ENST00000559329 PEX7O00628 323 aa12.58□□□□□ -0.4
USP8-208ENST00000559329 S100A9P06702 114 aaKnown RBP12.58□□□□□ -0.4
USP8-208ENST00000559329 FANCD2OSQ96PS1 177 aa12.58□□□□□ -0.4
USP8-208ENST00000559329 RASL11BQ9BPW5 248 aa12.58□□□□□ -0.4
USP8-208ENST00000559329 MRPL27Q9P0M9 148 aaKnown RBP12.58□□□□□ -0.4
USP8-208ENST00000559329 HIGD1AQ9Y241 93 aa12.58□□□□□ -0.4
USP8-208ENST00000559329 ISLRO14498 428 aa12.57□□□□□ -0.4
USP8-208ENST00000559329 ERVFC1-1P60608 527 aa12.57□□□□□ -0.4
USP8-208ENST00000559329 TTC9CQ8N5M4 171 aa12.57□□□□□ -0.4
USP8-208ENST00000559329 LINC00479Q96M42 142 aa12.57□□□□□ -0.4
USP8-208ENST00000559329 GPR61Q9BZJ8 451 aa12.57□□□□□ -0.4
USP8-208ENST00000559329 GAR1Q9NY12 217 aaKnown RBP12.57□□□□□ -0.4
USP8-208ENST00000559329 NBEAP1P0C6P0 100 aa12.56□□□□□ -0.4
USP8-208ENST00000559329 TMEM11P17152 192 aa12.56□□□□□ -0.4
USP8-208ENST00000559329 PDLIM4P50479 330 aa12.56□□□□□ -0.4
USP8-208ENST00000559329 ZNF48Q96MX3 618 aaPredicted RBP12.56□□□□□ -0.4
USP8-208ENST00000559329 RBM14Q96PK6 669 aaKnown RBP12.56□□□□□ -0.4
USP8-208ENST00000559329 TMEM14CQ9P0S9 112 aa12.56□□□□□ -0.4
USP8-208ENST00000559329 NCBP2LA6PVI3 153 aaKnown RBP12.56□□□□□ -0.4
USP8-208ENST00000559329 CNN1P51911 297 aaKnown RBP12.56□□□□□ -0.4
USP8-208ENST00000559329 YPEL3P61236 119 aaPredicted RBP12.56□□□□□ -0.4
USP8-208ENST00000559329 LYZP61626 148 aa12.56□□□□□ -0.4
USP8-208ENST00000559329 KLF17Q5JT82 389 aaPredicted RBP12.56□□□□□ -0.4
USP8-208ENST00000559329 Q8N9W7 124 aa12.56□□□□□ -0.4
USP8-208ENST00000559329 SLC25A39Q9BZJ4 359 aaPredicted RBP12.56□□□□□ -0.4
USP8-208ENST00000559329 ABCA1O95477 2261 aa12.56□□□□□ -0.4
USP8-208ENST00000559329 RD3LP0DJH9 198 aa12.55□□□□□ -0.4
USP8-208ENST00000559329 EGR2P11161 476 aaPredicted RBP12.55□□□□□ -0.4
USP8-208ENST00000559329 RANP62826 216 aaKnown RBP12.55□□□□□ -0.4
USP8-208ENST00000559329 LEMD1Q68G75 181 aa12.55□□□□□ -0.4
USP8-208ENST00000559329 TMEM183AQ8IXX5 376 aa12.55□□□□□ -0.4
USP8-208ENST00000559329 RNASE7Q9H1E1 156 aaKnown RBP12.55□□□□□ -0.4
USP8-208ENST00000559329 EPDR1Q9UM22 224 aa12.55□□□□□ -0.4
USP8-208ENST00000559329 ASH1LQ9NR48 2969 aaKnown RBP12.55□□□□□ -0.4
USP8-208ENST00000559329 WNK2Q9Y3S1 2297 aa12.55□□□□□ -0.4
USP8-208ENST00000559329 IGHV7-81A0A0B4J1V7 117 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 F8W735 103 aaPredicted RBP12.54□□□□□ -0.4
USP8-208ENST00000559329 TOMM40O96008 361 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 FABP1P07148 127 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 SNRPCP09234 159 aaKnown RBP12.54□□□□□ -0.4
USP8-208ENST00000559329 FAM106CPP0CH98 169 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 SAA4P35542 130 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 TMEM183BQ1AE95 376 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 RPEL1Q2QD12 228 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 FAM120AOSQ5T036 256 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 ZNF600Q6ZNG1 722 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 BLNKQ8WV28 456 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 LPAR2Q9HBW0 351 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 KLF12Q9Y4X4 402 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 DOPEY1Q5JWR5 2465 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 PCP4L1A6NKN8 68 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 S100A2P29034 98 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 GNG5P63218 68 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 PDZD11Q5EBL8 140 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 TRAPPC1Q9Y5R8 145 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 MED13LQ71F56 2210 aa12.54□□□□□ -0.4
USP8-208ENST00000559329 XKRY2A2RUG3 117 aa12.53□□□□□ -0.4
USP8-208ENST00000559329 HLA-DRB1P01911 266 aa12.53□□□□□ -0.4
USP8-208ENST00000559329 HIST1H1BP16401 226 aaKnown RBP12.53□□□□□ -0.4
USP8-208ENST00000559329 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
USP8-208ENST00000559329 ZNF491Q8N8L2 437 aa12.53□□□□□ -0.4
USP8-208ENST00000559329 SHANK2-AS3Q9BTD1 123 aa12.53□□□□□ -0.4
USP8-208ENST00000559329 C7orf69Q9H7B7 122 aa12.53□□□□□ -0.4
USP8-208ENST00000559329 C1RLQ9NZP8 487 aa12.53□□□□□ -0.4
USP8-208ENST00000559329 AKAP6Q13023 2319 aa12.53□□□□□ -0.4
USP8-208ENST00000559329 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.4
USP8-208ENST00000559329 WI2-2373I1.2A0A1W2PRP0 233 aa12.52□□□□□ -0.4
USP8-208ENST00000559329 PGPA6NDG6 321 aa12.52□□□□□ -0.4
USP8-208ENST00000559329 H3BRN7 92 aa12.52□□□□□ -0.4
USP8-208ENST00000559329 IBA57Q5T440 356 aaKnown RBP12.52□□□□□ -0.4
USP8-208ENST00000559329 FAM231DQ6ZW35 169 aa12.52□□□□□ -0.4
USP8-208ENST00000559329 C5orf17Q8NAS9 161 aa12.52□□□□□ -0.4
USP8-208ENST00000559329 HIST1H2BLQ99880 126 aa12.52□□□□□ -0.4
USP8-208ENST00000559329 ABCA2Q9BZC7 2435 aa12.52□□□□□ -0.4
USP8-208ENST00000559329 ACACBO00763 2458 aa12.52□□□□□ -0.4
USP8-208ENST00000559329 TRAV30A0A087WSZ9 112 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 VWC2LB2RUY7 222 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 NPFFO15130 113 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 SLC25A5P05141 298 aaKnown RBP12.52□□□□□ -0.41
USP8-208ENST00000559329 RNF224P0DH78 156 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 MGST1P10620 155 aaKnown RBP12.52□□□□□ -0.41
USP8-208ENST00000559329 BRS3P32247 399 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 S100A12P80511 92 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 PAX8Q06710 450 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 KLK9Q2XQG4 91 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 PYY3Q5JQD4 70 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 BAGE2Q86Y30 109 aa12.52□□□□□ -0.41
USP8-208ENST00000559329 CCL19Q99731 98 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms