RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 RCC1LQ96I51 464 aaKnown RBP11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 HYLS1Q96M11 299 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 WDR61Q9GZS3 305 aaKnown RBP11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 CYTL1Q9NRR1 136 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 U3KQE9 123 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 ZFP92A6NM28 416 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 AGPAT2O15120 278 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 DFFBO76075 338 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 CFDP00746 253 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 LINC00869P0C866 280 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 SYNJ2BPP57105 145 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 SELENOTP62341 195 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 OPCMLQ14982 345 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 FAM106AQ4KMX7 169 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 CYP2G1PQ6ZSU1 146 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 OR9G4Q8NGQ1 327 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 GGTLC1Q9BX51 225 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 MFFQ9GZY8 342 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 ARV1Q9H2C2 271 aa11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 PUS1Q9Y606 427 aaKnown RBP eCLIP11.26□□□□□ -0.61
SNRPA1-207ENST00000559309 IGHV3-35A0A0C4DH35 117 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 OVOL1O14753 267 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 SCGB2A1O75556 95 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 PF4P02776 101 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 CSN3P07498 182 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 RD3LP0DJH9 198 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 NUP62P37198 522 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 RPL29P47914 159 aaKnown RBP11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 CLINT1Q14677 625 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 USF2Q15853 346 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 LGALSLQ3ZCW2 172 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 LAMTOR1Q6IAA8 161 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 BTNL8Q6UX41 500 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 STPG3Q8N7X2 389 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 OR51G1Q8NGK1 321 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 Q8WTZ3 238 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 NPCDR1Q9BY65 106 aa11.25□□□□□ -0.61
SNRPA1-207ENST00000559309 A0A0D9SG52 128 aa11.24□□□□□ -0.61
SNRPA1-207ENST00000559309 UBE2L5PA0A1B0GUS4 154 aa11.24□□□□□ -0.61
SNRPA1-207ENST00000559309 SMCO3A2RU48 225 aa11.24□□□□□ -0.61
SNRPA1-207ENST00000559309 TAAR5O14804 337 aa11.24□□□□□ -0.61
SNRPA1-207ENST00000559309 CRYBB3P26998 211 aa11.24□□□□□ -0.61
SNRPA1-207ENST00000559309 DAZ1Q9NQZ3 744 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-207ENST00000559309 MRPL27Q9P0M9 148 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-207ENST00000559309 UFC1Q9Y3C8 167 aa11.24□□□□□ -0.61
SNRPA1-207ENST00000559309 C2orf70A6NJV1 201 aa11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 FABP1P07148 127 aa11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 EDN2P20800 178 aa11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 GATA2P23769 480 aaPredicted RBP11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 CAMLGP49069 296 aa11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 EIF2B2P49770 351 aaKnown RBP11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 TM4SF20Q53R12 229 aa11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 C9orf62Q8N4C0 152 aa11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 MARC2Q969Z3 335 aa11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 RNF125Q96EQ8 232 aa11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 SMIM3Q9BZL3 60 aa11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 VSIRQ9H7M9 311 aa11.23□□□□□ -0.61
SNRPA1-207ENST00000559309 FGF7P21781 194 aa11.22□□□□□ -0.61
SNRPA1-207ENST00000559309 ZNF266Q14584 549 aa11.22□□□□□ -0.61
SNRPA1-207ENST00000559309 PXDC1Q5TGL8 231 aa11.22□□□□□ -0.61
SNRPA1-207ENST00000559309 RPL7L1Q6DKI1 246 aaKnown RBP11.22□□□□□ -0.61
SNRPA1-207ENST00000559309 PATE2Q6UY27 113 aa11.22□□□□□ -0.61
SNRPA1-207ENST00000559309 BPIFCQ8NFQ6 507 aa11.22□□□□□ -0.61
SNRPA1-207ENST00000559309 OR2G3Q8NGZ4 309 aa11.22□□□□□ -0.61
SNRPA1-207ENST00000559309 PEMTQ9UBM1 199 aa11.22□□□□□ -0.61
SNRPA1-207ENST00000559309 TIMM9Q9Y5J7 89 aa11.22□□□□□ -0.61
SNRPA1-207ENST00000559309 IGHV7-4-1A0A0J9YVY3 117 aa11.21□□□□□ -0.61
SNRPA1-207ENST00000559309 BCL2L11O43521 198 aa11.21□□□□□ -0.61
SNRPA1-207ENST00000559309 YIF1AO95070 293 aa11.21□□□□□ -0.61
SNRPA1-207ENST00000559309 IGLV1-51P01701 117 aa11.21□□□□□ -0.61
SNRPA1-207ENST00000559309 IL4P05112 153 aa11.21□□□□□ -0.61
SNRPA1-207ENST00000559309 CBLN1P23435 193 aa11.21□□□□□ -0.61
SNRPA1-207ENST00000559309 ZFP69Q49AA0 526 aa11.21□□□□□ -0.61
SNRPA1-207ENST00000559309 GINS3Q9BRX5 216 aa11.21□□□□□ -0.61
SNRPA1-207ENST00000559309 PSMG3Q9BT73 122 aaPredicted RBP11.21□□□□□ -0.61
SNRPA1-207ENST00000559309 SMPXQ9UHP9 88 aa11.21□□□□□ -0.61
SNRPA1-207ENST00000559309 BUB3O43684 328 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 JTBO76095 146 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 IFNA5P01569 189 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 FOLR2P14207 255 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 INSL3P51460 131 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 AP2S1P53680 142 aaPredicted RBP11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 RAB31Q13636 194 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 MIC13Q5XKP0 118 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 FAM90A2PQ658T7 463 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 TMUB2Q71RG4 321 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 TMEM37Q8WXS4 190 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 ARPC5LQ9BPX5 153 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 MCRIP2Q9BUT9 160 aaKnown RBP11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 SLC39A9Q9NUM3 307 aa11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 PRKDCP78527 4128 aaKnown RBP11.2□□□□□ -0.62
SNRPA1-207ENST00000559309 IGHV3OR16-8A0A075B7F1 116 aa11.19□□□□□ -0.62
SNRPA1-207ENST00000559309 ZNF320A2RRD8 509 aa11.19□□□□□ -0.62
SNRPA1-207ENST00000559309 CHEK1O14757 476 aa11.19□□□□□ -0.62
SNRPA1-207ENST00000559309 APOHP02749 345 aaPredicted RBP11.19□□□□□ -0.62
SNRPA1-207ENST00000559309 CD33P20138 364 aa11.19□□□□□ -0.62
SNRPA1-207ENST00000559309 ATP6V0CP27449 155 aa11.19□□□□□ -0.62
SNRPA1-207ENST00000559309 SAMD5Q5TGI4 173 aa11.19□□□□□ -0.62
SNRPA1-207ENST00000559309 STOML3Q8TAV4 291 aa11.19□□□□□ -0.62
SNRPA1-207ENST00000559309 RSG1Q9BU20 258 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms