RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TECRQ9NZ01 308 aaKnown RBP8.57□□□□□ -1.04
SNX1-204ENST00000559061 CST7O76096 145 aa8.56□□□□□ -1.04
SNX1-204ENST00000559061 CD7P09564 240 aa8.56□□□□□ -1.04
SNX1-204ENST00000559061 GATA2P23769 480 aaPredicted RBP8.56□□□□□ -1.04
SNX1-204ENST00000559061 RPP30P78346 268 aaKnown RBP8.56□□□□□ -1.04
SNX1-204ENST00000559061 VWC2Q2TAL6 325 aa8.56□□□□□ -1.04
SNX1-204ENST00000559061 Q5BKY6 102 aa8.56□□□□□ -1.04
SNX1-204ENST00000559061 DMRTA1Q5VZB9 504 aa8.56□□□□□ -1.04
SNX1-204ENST00000559061 TMEM144Q7Z5S9 345 aa8.56□□□□□ -1.04
SNX1-204ENST00000559061 OR51G1Q8NGK1 321 aa8.56□□□□□ -1.04
SNX1-204ENST00000559061 MRAPQ8TCY5 172 aa8.56□□□□□ -1.04
SNX1-204ENST00000559061 DYNLRB2Q8TF09 96 aa8.56□□□□□ -1.04
SNX1-204ENST00000559061 COL7A1Q02388 2944 aa8.55□□□□□ -1.04
SNX1-204ENST00000559061 ZFP92A6NM28 416 aa8.55□□□□□ -1.04
SNX1-204ENST00000559061 FNDC10F2Z333 226 aa8.55□□□□□ -1.04
SNX1-204ENST00000559061 MPC2O95563 127 aa8.55□□□□□ -1.04
SNX1-204ENST00000559061 IL4P05112 153 aa8.55□□□□□ -1.04
SNX1-204ENST00000559061 RD3LP0DJH9 198 aa8.55□□□□□ -1.04
SNX1-204ENST00000559061 LYL1P12980 280 aa8.55□□□□□ -1.04
SNX1-204ENST00000559061 OR2F1Q13607 317 aa8.55□□□□□ -1.04
SNX1-204ENST00000559061 LCN12Q6JVE5 192 aa8.55□□□□□ -1.04
SNX1-204ENST00000559061 CHAC2Q8WUX2 184 aa8.55□□□□□ -1.04
SNX1-204ENST00000559061 L7N2F9 121 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 TSPAN4O14817 238 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 SULT1A1P50225 295 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 CAV2P51636 162 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 VAMP2P63027 116 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 EWSR1Q01844 656 aaKnown RBP eCLIP8.54□□□□□ -1.04
SNX1-204ENST00000559061 NHLH2Q02577 135 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 AKR1C1Q04828 323 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 SLC38A11Q08AI6 406 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 FAM24BQ8N5W8 94 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 TMEM217Q8N7C4 229 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 OR10P1Q8NGE3 313 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 GLMPQ8WWB7 406 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 RNF125Q96EQ8 232 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 C17orf77Q96MU5 243 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 MGST2Q99735 147 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 MBD2Q9UBB5 411 aa8.54□□□□□ -1.04
SNX1-204ENST00000559061 TRAV25A0A0B4J276 109 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 DFFBO76075 338 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 P2RY1P47900 373 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 BCAP31P51572 246 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 ODF3L2Q3SX64 289 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 C16orf54Q6UWD8 224 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 CYP2G1PQ6ZSU1 146 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 Q8WTZ3 238 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 CITED4Q96RK1 184 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 GINS3Q9BRX5 216 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 MED28Q9H204 178 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 WDR83OSQ9Y284 106 aa8.53□□□□□ -1.04
SNX1-204ENST00000559061 SMCO3A2RU48 225 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 E5RGE8 158 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 BUB3O43684 328 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 HNRNPCP07910 306 aaKnown RBP eCLIP8.52□□□□□ -1.05
SNX1-204ENST00000559061 LINC00869P0C866 280 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 IGHV4-30-4P0DP06 118 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 NPPCP23582 126 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 CD81P60033 236 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 LYZP61626 148 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 CYCSP99999 105 aaKnown RBP8.52□□□□□ -1.05
SNX1-204ENST00000559061 GUCA2BQ16661 112 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 PATE2Q6UY27 113 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 LINC00322Q6ZN03 302 aaPredicted RBP8.52□□□□□ -1.05
SNX1-204ENST00000559061 TCF24Q7RTU0 167 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 METTL26Q96S19 204 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 SPAG8Q99932 426 aaPredicted RBP8.52□□□□□ -1.05
SNX1-204ENST00000559061 NEURL2Q9BR09 285 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 GGACTQ9BVM4 153 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 SLC45A2Q9UMX9 530 aa8.52□□□□□ -1.05
SNX1-204ENST00000559061 A8MZ25 164 aa8.51□□□□□ -1.05
SNX1-204ENST00000559061 PVALBP20472 110 aaPredicted RBP8.51□□□□□ -1.05
SNX1-204ENST00000559061 PLP1P60201 277 aa8.51□□□□□ -1.05
SNX1-204ENST00000559061 ZNF124Q15973 351 aa8.51□□□□□ -1.05
SNX1-204ENST00000559061 DEFB125Q8N687 156 aa8.51□□□□□ -1.05
SNX1-204ENST00000559061 GGTLC1Q9BX51 225 aa8.51□□□□□ -1.05
SNX1-204ENST00000559061 WFDC1Q9HC57 220 aa8.51□□□□□ -1.05
SNX1-204ENST00000559061 NPVFQ9HCQ7 196 aa8.51□□□□□ -1.05
SNX1-204ENST00000559061 ZMAT5Q9UDW3 170 aaKnown RBP8.51□□□□□ -1.05
SNX1-204ENST00000559061 TGP01266 2768 aa8.51□□□□□ -1.05
SNX1-204ENST00000559061 IGKV3-7A0A075B6H7 116 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 UBE2L5PA0A1B0GUS4 154 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 RBMY1BA6NDE4 496 aaKnown RBP8.5□□□□□ -1.05
SNX1-204ENST00000559061 RBMY1EA6NEQ0 496 aaKnown RBP8.5□□□□□ -1.05
SNX1-204ENST00000559061 AGPAT2O15120 278 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 GIPP09681 153 aaPredicted RBP8.5□□□□□ -1.05
SNX1-204ENST00000559061 RBMY1DP0C7P1 496 aaKnown RBP8.5□□□□□ -1.05
SNX1-204ENST00000559061 FRMD6-AS1P0C7T7 363 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 EIF2B2P49770 351 aaKnown RBP8.5□□□□□ -1.05
SNX1-204ENST00000559061 PRR20EP86478 221 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 PRR20CP86479 221 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 PRR20DP86480 221 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 PRR20BP86481 221 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 PRR20AP86496 221 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 MORN5Q5VZ52 161 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 TEPPQ6URK8 271 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 GBGT1Q8N5D6 347 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 BPIFCQ8NFQ6 507 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 OR5C1Q8NGR4 320 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 DCANP1Q8TF63 244 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms