RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 CLN5O75503 358 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 NDUFB6O95139 128 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 SFT2D2O95562 160 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 IGKV1-17P01599 117 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 RBMY1DP0C7P1 496 aaKnown RBP4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 NPY1RP25929 384 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 INPP1P49441 399 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 ODF3L2Q3SX64 289 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 RBPMS2Q6ZRY4 209 aaKnown RBP4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 SLC16A13Q7RTY0 426 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 OR52B4Q8NGK2 314 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 DTD1Q8TEA8 209 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 ZNF503Q96F45 646 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 RNF2Q99496 336 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 RHPN1-AS1Q9BWJ2 59 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 RBKSQ9H477 322 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 RETNQ9HD89 108 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 FLVCR2Q9UPI3 526 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 PUS1Q9Y606 427 aaKnown RBP eCLIP4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 TENM2Q9NT68 2774 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 SACSQ9NZJ4 4579 aa4.48□□□□□ -1.69
CTDSPL2-204ENST00000558966 IGHV3OR16-13A0A075B7E8 117 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 TRAV14DV4A0A0A6YYC5 116 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 IGHV3-74A0A0B4J1X5 117 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 H0YIZ8 118 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 PLA2G10O15496 165 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 APOHP02749 345 aaPredicted RBP4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 IGLC1P0CG04 106 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 RND2P52198 227 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 UBE2MP61081 183 aaKnown RBP4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 TIGITQ495A1 244 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 PRSS54Q6PEW0 395 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 TMEM116Q8NCL8 245 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 OR1S1Q8NH92 325 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 RNASEH2CQ8TDP1 164 aaKnown RBP4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 HIPK2Q9H2X6 1198 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 CACFD1Q9UGQ2 172 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 PIGBOS1A0A0B4J2F0 54 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 RPS10-NUDT3A0A1W2PQS6 291 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 C9orf170A2RU37 121 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 IFNA10P01566 189 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 MBPP02686 304 aaPredicted RBP4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 HOXB5P09067 269 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 IAPPP10997 89 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 SLC25A4P12235 298 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 SLC25A6P12236 298 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 DHRS2Q13268 280 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 GGNBP1Q5YKI7 109 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 LAMTOR1Q6IAA8 161 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 C7orf50Q9BRJ6 194 aaKnown RBP4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 GINS3Q9BRX5 216 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 VSIRQ9H7M9 311 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 UBQLN2Q9UHD9 624 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 TMED3Q9Y3Q3 217 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 U3KQ87 197 aa4.47□□□□□ -1.69
CTDSPL2-204ENST00000558966 IGHV3-66A0A0C4DH42 116 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 OR4C46A6NHA9 309 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 MPTX1A8MV57 137 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 FAM90A26D6RGX4 464 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 ADAP1O75689 374 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 OR4E1P0C645 316 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 ANXA7P20073 488 aaKnown RBP4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 OR10J1P30954 320 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 VAMP2P63027 116 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 TCF24Q7RTU0 167 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 LYG2Q86SG7 212 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 NOXA1Q86UR1 476 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 FAM110AQ9BQ89 295 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 EDA2RQ9HAV5 297 aa4.46□□□□□ -1.7
CTDSPL2-204ENST00000558966 IGKV3-7A0A075B6H7 116 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 TRAV30A0A087WSZ9 112 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 CENPXA8MT69 81 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 LYRM1O43325 122 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 DFFBO76075 338 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 NPSP0C0P6 89 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 CRYBB3P26998 211 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 TFPI2P48307 235 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 YPEL3P61236 119 aaPredicted RBP4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 USF2Q15853 346 aaPredicted RBP4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 CNPY1Q3B7I2 92 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 ETFRF1Q6IPR1 90 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 GBGT1Q8N5D6 347 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 OR1S2Q8NGQ3 325 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 MUC7Q8TAX7 377 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 GLMPQ8WWB7 406 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 ACY3Q96HD9 319 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 GGTLC1Q9BX51 225 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 MAGT1Q9H0U3 335 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 RYR2Q92736 4967 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 IGKV1D-37A0A075B6S9 117 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 LOC102724200A0A096LPH7 203 aaPredicted RBP4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 PRSS46E5RG02 174 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 SYNGR2O43760 224 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 SCGB2A1O75556 95 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 IFNA4P05014 189 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 LYL1P12980 280 aa4.45□□□□□ -1.7
CTDSPL2-204ENST00000558966 NPPCP23582 126 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms