RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 IFNA4P05014 189 aa9.33□□□□□ -0.92
RABGGTA-207ENST00000558936 IL5P05113 134 aa9.33□□□□□ -0.92
RABGGTA-207ENST00000558936 NKX2-1P43699 371 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-207ENST00000558936 TFPI2P48307 235 aa9.33□□□□□ -0.92
RABGGTA-207ENST00000558936 IAH1Q2TAA2 248 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-207ENST00000558936 SPANXN5Q5MJ07 72 aa9.33□□□□□ -0.92
RABGGTA-207ENST00000558936 C16orf54Q6UWD8 224 aa9.33□□□□□ -0.92
RABGGTA-207ENST00000558936 OR51G1Q8NGK1 321 aa9.33□□□□□ -0.92
RABGGTA-207ENST00000558936 SMIM8Q96KF7 97 aa9.33□□□□□ -0.92
RABGGTA-207ENST00000558936 FAM110AQ9BQ89 295 aa9.33□□□□□ -0.92
RABGGTA-207ENST00000558936 GINS3Q9BRX5 216 aa9.33□□□□□ -0.92
RABGGTA-207ENST00000558936 OR4C46A6NHA9 309 aa9.32□□□□□ -0.92
RABGGTA-207ENST00000558936 K7EPK0 472 aa9.32□□□□□ -0.92
RABGGTA-207ENST00000558936 IL4P05112 153 aa9.32□□□□□ -0.92
RABGGTA-207ENST00000558936 ATP5IP56385 69 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-207ENST00000558936 ACOT7LQ6ZUV0 252 aa9.32□□□□□ -0.92
RABGGTA-207ENST00000558936 NOXA1Q86UR1 476 aa9.32□□□□□ -0.92
RABGGTA-207ENST00000558936 C12orf45Q8N5I9 185 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-207ENST00000558936 WDR12Q9GZL7 423 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-207ENST00000558936 MAP6D1Q9H9H5 199 aa9.32□□□□□ -0.92
RABGGTA-207ENST00000558936 H0YIZ8 118 aa9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 K7EQG2 157 aa9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 SIX6O95475 246 aa9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 GIG44P09565 113 aaPredicted RBP9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 NPPCP23582 126 aa9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 P2RY1P47900 373 aa9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 DEFB1P60022 68 aa9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 EWSR1Q01844 656 aaKnown RBP eCLIP9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 OR2F1Q13607 317 aa9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 ETFRF1Q6IPR1 90 aa9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 WFDC3Q8IUB2 231 aa9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 MARVELD1Q9BSK0 173 aa9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 PSENENQ9NZ42 101 aa9.31□□□□□ -0.92
RABGGTA-207ENST00000558936 METTL15P1P0C7V9 234 aa9.3□□□□□ -0.92
RABGGTA-207ENST00000558936 RD3LP0DJH9 198 aa9.3□□□□□ -0.92
RABGGTA-207ENST00000558936 Q8WTZ3 238 aa9.3□□□□□ -0.92
RABGGTA-207ENST00000558936 RNF125Q96EQ8 232 aa9.3□□□□□ -0.92
RABGGTA-207ENST00000558936 TRGV9Q99603 122 aa9.3□□□□□ -0.92
RABGGTA-207ENST00000558936 OVOL2Q9BRP0 275 aa9.3□□□□□ -0.92
RABGGTA-207ENST00000558936 GGTLC1Q9BX51 225 aa9.3□□□□□ -0.92
RABGGTA-207ENST00000558936 GSKIPQ9P0R6 139 aa9.3□□□□□ -0.92
RABGGTA-207ENST00000558936 LOC102724200A0A096LPH7 203 aaPredicted RBP9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 FAM24AA6NFZ4 105 aa9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 SOCS3O14543 225 aa9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 SCGB2A1O75556 95 aa9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 MED6O75586 246 aa9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 SCGB1D2O95969 90 aa9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 CD5P06127 495 aa9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 HNRNPCP07910 306 aaKnown RBP eCLIP9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 H2BFSP57053 126 aa9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 LEMD1Q68G75 181 aa9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 PATE2Q6UY27 113 aa9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 MUC7Q8TAX7 377 aa9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 CIB3Q96Q77 187 aaPredicted RBP9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 METTL26Q96S19 204 aa9.29□□□□□ -0.92
RABGGTA-207ENST00000558936 IGSF23A1L1A6 192 aa9.28□□□□□ -0.92
RABGGTA-207ENST00000558936 C3orf84H3BNL1 204 aa9.28□□□□□ -0.92
RABGGTA-207ENST00000558936 IFNA21P01568 189 aa9.28□□□□□ -0.92
RABGGTA-207ENST00000558936 RPL35AP18077 110 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-207ENST00000558936 BMI1P35226 326 aa9.28□□□□□ -0.92
RABGGTA-207ENST00000558936 RRAS2P62070 204 aaPredicted RBP9.28□□□□□ -0.92
RABGGTA-207ENST00000558936 RAB32Q13637 225 aa9.28□□□□□ -0.92
RABGGTA-207ENST00000558936 OR8G2PQ6IF36 304 aa9.28□□□□□ -0.92
RABGGTA-207ENST00000558936 C2orf50Q96LR7 162 aa9.28□□□□□ -0.92
RABGGTA-207ENST00000558936 PAIP2BQ9ULR5 123 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-207ENST00000558936 STRAPQ9Y3F4 350 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-207ENST00000558936 A0A1W2PS18 150 aa9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 ZFP92A6NM28 416 aa9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 INMT-MINDY4F8WBC2 141 aa9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 TSC22D2O75157 780 aa9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 TAS2R30P59541 319 aa9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 DEFB131AP59861 70 aa9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 RAB11AP62491 216 aa9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 MZT2BQ6NZ67 158 aa9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 TMEM144Q7Z5S9 345 aa9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 SLC35E1Q96K37 410 aa9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 TMEM231Q9H6L2 316 aa9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 LSM5Q9Y4Y9 91 aaKnown RBP9.27□□□□□ -0.93
RABGGTA-207ENST00000558936 TRAV2A0A0B4J234 112 aa9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 FAM25EA8MYX2 175 aa9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 LINC00869P0C866 280 aa9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 PAFAH1B2P68402 229 aa9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 GDF5OSQ5U4N7 250 aa9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 MORN5Q5VZ52 161 aa9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 ENKURQ8TC29 256 aa9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 RAB40CQ96S21 281 aa9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 MGST2Q99735 147 aa9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 RNF126Q9BV68 326 aa9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 OR5AC2Q9NZP5 309 aa9.26□□□□□ -0.93
RABGGTA-207ENST00000558936 TENM2Q9NT68 2774 aa9.25□□□□□ -0.93
RABGGTA-207ENST00000558936 C5orf51A6NDU8 294 aa9.25□□□□□ -0.93
RABGGTA-207ENST00000558936 KNCNA6PVL3 124 aa9.25□□□□□ -0.93
RABGGTA-207ENST00000558936 SNRPGP15A8MWD9 76 aa9.25□□□□□ -0.93
RABGGTA-207ENST00000558936 DNASE2O00115 360 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-207ENST00000558936 MRPS12O15235 138 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-207ENST00000558936 ZNF688P0C7X2 276 aa9.25□□□□□ -0.93
RABGGTA-207ENST00000558936 EIF2B2P49770 351 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-207ENST00000558936 LYZP61626 148 aa9.25□□□□□ -0.93
RABGGTA-207ENST00000558936 RPL11P62913 178 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms