RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 DCUN1D2Q6PH85 259 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 Q6ZQT0 140 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 CROCCP2Q86T23 111 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 COA5Q86WW8 74 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 FAM24BQ8N5W8 94 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 OR4D11Q8NGI4 311 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 OR2T10Q8NGZ9 312 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 STAG3L4Q8TBR4 150 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 DYDC1Q8WWB3 177 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 SLAMF6Q96DU3 332 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 ADAT3Q96EY9 351 aaPredicted RBP0.89□□□□□ -2.27
VPS13C-207ENST00000558919 HSPB9Q9BQS6 159 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 YIPF3Q9GZM5 350 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 TMEM133Q9H2Q1 129 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 MIXL1Q9H2W2 232 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 NHP2Q9NX24 153 aaKnown RBP0.89□□□□□ -2.27
VPS13C-207ENST00000558919 SMPXQ9UHP9 88 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 PCTPQ9UKL6 214 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 SLC35A3Q9Y2D2 325 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 KIF13BQ9NQT8 1826 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 RGS12O14924 1447 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 RIC1Q4ADV7 1423 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 FREM1Q5H8C1 2179 aa0.89□□□□□ -2.27
VPS13C-207ENST00000558919 TRGV2A0A075B6R0 118 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 IGKV1-9A0A0C4DH69 117 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 GNG14A0A1W2PPG7 69 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 MAP1LC3B2A6NCE7 125 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 IBA57-AS1B1ANH7 110 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 F8W036 122 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 ZNF737O75373 536 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 PIAS1O75925 651 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 IFNA14P01570 189 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 CLPSP04118 112 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 UBBP0CG47 229 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 OGNP20774 298 aaKnown RBP0.88□□□□□ -2.27
VPS13C-207ENST00000558919 NFYBP25208 207 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 MYL5Q02045 173 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 ELOBQ15370 118 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 SPANXN5Q5MJ07 72 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 AKAP14Q86UN6 197 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 TAC4Q86UU9 113 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 RPS19BP1Q86WX3 136 aaKnown RBP0.88□□□□□ -2.27
VPS13C-207ENST00000558919 IFT20Q8IY31 132 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 EXOC3-AS1Q8N2X6 119 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 OR13D1Q8NGV5 346 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 OR10J5Q8NHC4 309 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 ZNF563Q8TA94 476 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 CANT1Q8WVQ1 401 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 MBD3L1Q8WWY6 194 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 AQP3Q92482 292 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 PLEKHB2Q96CS7 222 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 DDA1Q9BW61 102 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 OR2J1Q9GZK6 312 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 MAP1LC3BQ9GZQ8 125 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 TAS2R4Q9NYW5 299 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 MED11Q9P086 117 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 LAMTOR3Q9UHA4 124 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 CAMSAP1Q5T5Y3 1602 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 TOPBP1Q92547 1522 aa0.88□□□□□ -2.27
VPS13C-207ENST00000558919 YTHDC2Q9H6S0 1430 aaKnown RBP0.88□□□□□ -2.27
VPS13C-207ENST00000558919 HEATR5BQ9P2D3 2071 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 SMARCA4P51532 1647 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 IGKV1D-42A0A075B6H8 117 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 TMEM256-PLSCR3K7ERE1 68 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 M0R378 163 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 PROSCO94903 275 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 CRPP02741 224 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 SHBGP04278 402 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 CSN2P05814 226 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 CTSDP07339 412 aaPredicted RBP0.87□□□□□ -2.27
VPS13C-207ENST00000558919 ZNF705BP0CI00 300 aaPredicted RBP0.87□□□□□ -2.27
VPS13C-207ENST00000558919 MGST1P10620 155 aaKnown RBP0.87□□□□□ -2.27
VPS13C-207ENST00000558919 FKBP2P26885 142 aaKnown RBP0.87□□□□□ -2.27
VPS13C-207ENST00000558919 S100GP29377 79 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 AKR1C3P42330 323 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 UBE2BP63146 152 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 BRMS1LQ5PSV4 323 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 TMEM78Q5T7P6 136 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 EIF5AL1Q6IS14 154 aaKnown RBP0.87□□□□□ -2.27
VPS13C-207ENST00000558919 C22orf39Q6P5X5 142 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 ZNF826PQ6ZT77 177 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 PHF13Q86YI8 300 aaPredicted RBP0.87□□□□□ -2.27
VPS13C-207ENST00000558919 PDZD9Q8IXQ8 264 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 SLC30A7Q8NEW0 376 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 NUP35Q8NFH5 326 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 OR10K1Q8NGX5 313 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 PPTC7Q8NI37 304 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 GRPEL2Q8TAA5 225 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 TEX37Q96LM6 180 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 PRADC1Q9BSG0 188 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 CCDC32Q9BV29 185 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 LHFPL6Q9Y693 200 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 UHRF1BP1Q6BDS2 1440 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 MYOFQ9NZM1 2061 aa0.87□□□□□ -2.27
VPS13C-207ENST00000558919 ANKRD30AQ9BXX3 1397 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 BRWD1Q9NSI6 2320 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 TRAV3A0A0B4J244 114 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 A0A1W2PRE2 83 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 TLCD2A6NGC4 264 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 E7EQ34 232 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms