RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 REG4Q9BYZ8 158 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 C14orf132Q9NPU4 83 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 TRAV12-1A0A0B4J245 112 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 TRAV1-1A0A0B4J248 108 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 IGKV1-9A0A0C4DH69 117 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 E5RI56 91 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 HYPMO75409 117 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 SRIP30626 198 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 DEFA3P59666 94 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 NCALDP61601 193 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 ESRGQ1W209 222 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 OR13C6PQ8NH95 151 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 SLAMF6Q96DU3 332 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 TEX37Q96LM6 180 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 PRADC1Q9BSG0 188 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 C6orf62Q9GZU0 229 aaPredicted RBP1.54□□□□□ -2.16
CASC4-206ENST00000558847 BCL2L10Q9HD36 194 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 LYRM2Q9NU23 88 aaPredicted RBP1.54□□□□□ -2.16
CASC4-206ENST00000558847 PRNDQ9UKY0 176 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 CAMSAP1Q5T5Y3 1602 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 HECW1Q76N89 1606 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 CCDC88CQ9P219 2028 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 FREM1Q5H8C1 2179 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 MUC6Q6W4X9 2439 aa1.54□□□□□ -2.16
CASC4-206ENST00000558847 C2orf70A6NJV1 201 aa1.53□□□□□ -2.16
CASC4-206ENST00000558847 H7C1C5 153 aa1.53□□□□□ -2.16
CASC4-206ENST00000558847 RNASE3P12724 160 aaKnown RBP1.53□□□□□ -2.16
CASC4-206ENST00000558847 RNASE4P34096 147 aaKnown RBP1.53□□□□□ -2.16
CASC4-206ENST00000558847 PHBP35232 272 aa1.53□□□□□ -2.16
CASC4-206ENST00000558847 SSR2P43308 183 aa1.53□□□□□ -2.16
CASC4-206ENST00000558847 LCN6P62502 163 aa1.53□□□□□ -2.16
CASC4-206ENST00000558847 SURF2Q15527 256 aaPredicted RBP1.53□□□□□ -2.16
CASC4-206ENST00000558847 RNASE10Q5GAN6 216 aaKnown RBP1.53□□□□□ -2.16
CASC4-206ENST00000558847 SLC30A7Q8NEW0 376 aa1.53□□□□□ -2.16
CASC4-206ENST00000558847 SH3BGRL3Q9H299 93 aa1.53□□□□□ -2.16
CASC4-206ENST00000558847 SSR3Q9UNL2 185 aa1.53□□□□□ -2.16
CASC4-206ENST00000558847 MYH11P35749 1972 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 A0A087WX48 190 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 DUXBA0A1W2PPF3 345 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 A8MWV9 139 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 TAX1BP3O14907 124 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 APOA2P02652 100 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 UBE2BP63146 152 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 LINC00301Q8NCQ3 95 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 MALSU1Q96EH3 234 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 MRPL57Q9BQC6 102 aaKnown RBP1.52□□□□□ -2.17
CASC4-206ENST00000558847 PBOV1Q9GZY1 135 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 TMEM126AQ9H061 195 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 RASL12Q9NYN1 266 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 KLK9Q9UKQ9 250 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 STRCQ7RTU9 1775 aa1.52□□□□□ -2.17
CASC4-206ENST00000558847 OTOGLQ3ZCN5 2332 aa1.51□□□□□ -2.17
CASC4-206ENST00000558847 BAZ2BQ9UIF8 2168 aaKnown RBP1.51□□□□□ -2.17
CASC4-206ENST00000558847 MIA2Q96PC5 1412 aa1.51□□□□□ -2.17
CASC4-206ENST00000558847 CST8O60676 142 aa1.51□□□□□ -2.17
CASC4-206ENST00000558847 DYNLT1P63172 113 aa1.51□□□□□ -2.17
CASC4-206ENST00000558847 PRRT1Q99946 306 aa1.51□□□□□ -2.17
CASC4-206ENST00000558847 PBDC1Q9BVG4 233 aa1.51□□□□□ -2.17
CASC4-206ENST00000558847 ACER3Q9NUN7 267 aa1.51□□□□□ -2.17
CASC4-206ENST00000558847 KIF1BO60333 1816 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 ECM29Q5VYK3 1845 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 HCRTO43612 131 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 NDUFB3O43676 98 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 BANF1O75531 89 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 LYZL6O75951 148 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 S100A5P33763 92 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 TCTAP57738 103 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 PDZD9Q8IXQ8 264 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 STAG3L4Q8TBR4 150 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 GPER1Q99527 375 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 RETNLBQ9BQ08 111 aa1.5□□□□□ -2.17
CASC4-206ENST00000558847 SLC25A21Q9BQT8 299 aaPredicted RBP1.5□□□□□ -2.17
CASC4-206ENST00000558847 DOCK3Q8IZD9 2030 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 IGKV2D-26A0A0A0MRZ7 120 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 RIIAD1A6NNX1 92 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 TIMM17BO60830 172 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 DHFRP00374 187 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 IFNA14P01570 189 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 LYNX1P0DP58 116 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 GNG5P63218 68 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 EIF5AL1Q6IS14 154 aaKnown RBP1.49□□□□□ -2.17
CASC4-206ENST00000558847 LYG2Q86SG7 212 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 C3orf56Q8N813 242 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 C15orf53Q8NAA6 179 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 GINS3Q9BRX5 216 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 OR2J1Q9GZK6 312 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 BOLA2Q9H3K6 86 aa1.49□□□□□ -2.17
CASC4-206ENST00000558847 ROCK1Q13464 1354 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 TRAV3A0A0B4J244 114 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 M0R378 163 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 GEMIN2O14893 280 aaKnown RBP1.48□□□□□ -2.17
CASC4-206ENST00000558847 GADD45GO95257 159 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 PLCXD2Q0VAA5 305 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 C1orf137Q5JT78 98 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 IFT20Q8IY31 132 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 TMEM254Q8TBM7 123 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 ZHX1-C8orf76Q96EF9 292 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 LYSMD1Q96S90 227 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 BIN3Q9NQY0 253 aa1.48□□□□□ -2.17
CASC4-206ENST00000558847 LY96Q9Y6Y9 160 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms