RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 FAM24BQ8N5W8 94 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 ACY3Q96HD9 319 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 RABAC1Q9UI14 185 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 TMED3Q9Y3Q3 217 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 PLECQ15149 4684 aaKnown RBP11.39□□□□□ -0.59
CSHL1-208ENST00000558609 A0A0J9YWU9 116 aa11.39□□□□□ -0.59
CSHL1-208ENST00000558609 MPTX1A8MV57 137 aa11.39□□□□□ -0.59
CSHL1-208ENST00000558609 IL4P05112 153 aa11.39□□□□□ -0.59
CSHL1-208ENST00000558609 ATF4P18848 351 aaPredicted RBP11.39□□□□□ -0.59
CSHL1-208ENST00000558609 EIF2B2P49770 351 aaKnown RBP11.39□□□□□ -0.59
CSHL1-208ENST00000558609 UBE2MP61081 183 aaKnown RBP11.39□□□□□ -0.59
CSHL1-208ENST00000558609 USF2Q15853 346 aaPredicted RBP11.39□□□□□ -0.59
CSHL1-208ENST00000558609 C16orf54Q6UWD8 224 aa11.39□□□□□ -0.59
CSHL1-208ENST00000558609 STXBP6Q8NFX7 210 aa11.39□□□□□ -0.59
CSHL1-208ENST00000558609 GATAD1Q8WUU5 269 aa11.39□□□□□ -0.59
CSHL1-208ENST00000558609 HELTA6NFD8 242 aa11.38□□□□□ -0.59
CSHL1-208ENST00000558609 MED6O75586 246 aa11.38□□□□□ -0.59
CSHL1-208ENST00000558609 NDUFB6O95139 128 aa11.38□□□□□ -0.59
CSHL1-208ENST00000558609 PSG1P11464 419 aa11.38□□□□□ -0.59
CSHL1-208ENST00000558609 AP2S1P53680 142 aaPredicted RBP11.38□□□□□ -0.59
CSHL1-208ENST00000558609 GAMTQ14353 236 aa11.38□□□□□ -0.59
CSHL1-208ENST00000558609 OXA1LQ15070 435 aa11.38□□□□□ -0.59
CSHL1-208ENST00000558609 LEMD1Q68G75 181 aa11.38□□□□□ -0.59
CSHL1-208ENST00000558609 NRARPQ7Z6K4 114 aa11.38□□□□□ -0.59
CSHL1-208ENST00000558609 DCANP1Q8TF63 244 aa11.38□□□□□ -0.59
CSHL1-208ENST00000558609 GLMPQ8WWB7 406 aa11.38□□□□□ -0.59
CSHL1-208ENST00000558609 EWSR1Q01844 656 aaKnown RBP eCLIP11.37□□□□□ -0.59
CSHL1-208ENST00000558609 SLC35E1Q96K37 410 aa11.37□□□□□ -0.59
CSHL1-208ENST00000558609 hCG_2014768A0A024R1R8 64 aa11.36□□□□□ -0.59
CSHL1-208ENST00000558609 C9orf170A2RU37 121 aa11.36□□□□□ -0.59
CSHL1-208ENST00000558609 BUB3O43684 328 aa11.36□□□□□ -0.59
CSHL1-208ENST00000558609 HOXB5P09067 269 aa11.36□□□□□ -0.59
CSHL1-208ENST00000558609 IAPPP10997 89 aa11.36□□□□□ -0.59
CSHL1-208ENST00000558609 RAB11AP62491 216 aa11.36□□□□□ -0.59
CSHL1-208ENST00000558609 GGNBP1Q5YKI7 109 aa11.36□□□□□ -0.59
CSHL1-208ENST00000558609 OR51G1Q8NGK1 321 aa11.36□□□□□ -0.59
CSHL1-208ENST00000558609 CIB3Q96Q77 187 aaPredicted RBP11.36□□□□□ -0.59
CSHL1-208ENST00000558609 IGKV1D-37A0A075B6S9 117 aa11.35□□□□□ -0.59
CSHL1-208ENST00000558609 ZFP92A6NM28 416 aa11.35□□□□□ -0.59
CSHL1-208ENST00000558609 SYNGR2O43760 224 aa11.35□□□□□ -0.59
CSHL1-208ENST00000558609 JTBO76095 146 aa11.35□□□□□ -0.59
CSHL1-208ENST00000558609 ZNF688P0C7X2 276 aa11.35□□□□□ -0.59
CSHL1-208ENST00000558609 RPP30P78346 268 aaKnown RBP11.35□□□□□ -0.59
CSHL1-208ENST00000558609 DHRS2Q13268 280 aa11.35□□□□□ -0.59
CSHL1-208ENST00000558609 Q6ZNX1 250 aa11.35□□□□□ -0.59
CSHL1-208ENST00000558609 STHQ8IWL8 128 aa11.35□□□□□ -0.59
CSHL1-208ENST00000558609 TMEM217Q8N7C4 229 aa11.35□□□□□ -0.59
CSHL1-208ENST00000558609 RNF125Q96EQ8 232 aa11.35□□□□□ -0.59
CSHL1-208ENST00000558609 RARRES2Q99969 163 aa11.35□□□□□ -0.59
CSHL1-208ENST00000558609 CA1P00915 261 aaPredicted RBP11.34□□□□□ -0.59
CSHL1-208ENST00000558609 FABP1P07148 127 aa11.34□□□□□ -0.59
CSHL1-208ENST00000558609 NUP62P37198 522 aaPredicted RBP11.34□□□□□ -0.59
CSHL1-208ENST00000558609 ZNF90Q03938 601 aa11.34□□□□□ -0.59
CSHL1-208ENST00000558609 OR8G2PQ6IF36 304 aa11.34□□□□□ -0.59
CSHL1-208ENST00000558609 TRPT1Q86TN4 253 aaKnown RBP11.34□□□□□ -0.59
CSHL1-208ENST00000558609 MAGT1Q9H0U3 335 aa11.34□□□□□ -0.59
CSHL1-208ENST00000558609 SEPSECSQ9HD40 501 aaKnown RBP11.34□□□□□ -0.59
CSHL1-208ENST00000558609 PFDN2Q9UHV9 154 aa11.34□□□□□ -0.59
CSHL1-208ENST00000558609 FLVCR2Q9UPI3 526 aa11.34□□□□□ -0.59
CSHL1-208ENST00000558609 AGRNO00468 2067 aa11.34□□□□□ -0.59
CSHL1-208ENST00000558609 CXorf65A6NEN9 183 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 PRSS46E5RG02 174 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 WRBO00258 174 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 TCRBP04435 133 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 OR4E1P0C645 316 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 BTCP35070 178 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 ID3Q02535 119 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 SIGLEC15Q6ZMC9 328 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 THAP8Q8NA92 274 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 OR11H2Q8NH07 326 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 COQ8AQ8NI60 647 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 TRGV9Q99603 122 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 NRN1Q9NPD7 142 aa11.33□□□□□ -0.6
CSHL1-208ENST00000558609 PAIP2BQ9ULR5 123 aaKnown RBP11.33□□□□□ -0.6
CSHL1-208ENST00000558609 TRAV6A0A075B6T7 132 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 A0A1B0GVG6 124 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 KNCNA6PVL3 124 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 SNRPGP15A8MWD9 76 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 INMT-MINDY4F8WBC2 141 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 ADAP1O75689 374 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
CSHL1-208ENST00000558609 H2AFB2P0C5Z0 115 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 SPP1P10451 314 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 PMS2P11Q13670 270 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 TMEM41BQ5BJD5 291 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 MORN3Q6PF18 240 aaPredicted RBP11.32□□□□□ -0.6
CSHL1-208ENST00000558609 RAB40CQ96S21 281 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 PBDC1Q9BVG4 233 aa11.32□□□□□ -0.6
CSHL1-208ENST00000558609 IGKV1OR2-108A0A075B7D4 117 aa11.31□□□□□ -0.6
CSHL1-208ENST00000558609 NUPR2A6NF83 97 aa11.31□□□□□ -0.6
CSHL1-208ENST00000558609 SNRPD3P62318 126 aaKnown RBP11.31□□□□□ -0.6
CSHL1-208ENST00000558609 PSMG4Q5JS54 123 aa11.31□□□□□ -0.6
CSHL1-208ENST00000558609 ACTL10Q5JWF8 245 aa11.31□□□□□ -0.6
CSHL1-208ENST00000558609 C1orf194Q5T5A4 169 aa11.31□□□□□ -0.6
CSHL1-208ENST00000558609 CEMP1Q6PRD7 247 aaPredicted RBP11.31□□□□□ -0.6
CSHL1-208ENST00000558609 C11orf68Q9H3H3 251 aaKnown RBP11.31□□□□□ -0.6
CSHL1-208ENST00000558609 CFDP00746 253 aaPredicted RBP11.3□□□□□ -0.6
CSHL1-208ENST00000558609 IFNA21P01568 189 aa11.3□□□□□ -0.6
CSHL1-208ENST00000558609 ANXA7P20073 488 aaKnown RBP11.3□□□□□ -0.6
CSHL1-208ENST00000558609 LYZP61626 148 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms