RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 K7EMT4 169 aa13.22□□□□□ -0.29
TPM1-214ENST00000558544 IGLV1-51P01701 117 aa13.22□□□□□ -0.29
TPM1-214ENST00000558544 RD3LP0DJH9 198 aa13.22□□□□□ -0.29
TPM1-214ENST00000558544 PSG1P11464 419 aa13.22□□□□□ -0.29
TPM1-214ENST00000558544 HBG1P69891 147 aa13.22□□□□□ -0.29
TPM1-214ENST00000558544 HBG2P69892 147 aa13.22□□□□□ -0.29
TPM1-214ENST00000558544 NHLH2Q02577 135 aa13.22□□□□□ -0.29
TPM1-214ENST00000558544 LAMTOR1Q6IAA8 161 aa13.22□□□□□ -0.29
TPM1-214ENST00000558544 NPVFQ9HCQ7 196 aa13.22□□□□□ -0.29
TPM1-214ENST00000558544 IGHV3-49A0A0A0MS15 119 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 IL4P05112 153 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 C8orf88P0DMB2 117 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 LYL1P12980 280 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 S100A11P31949 105 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 KRTAP10-11P60412 298 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 EGFEM1PQ0D2K5 195 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 OR2F1Q13607 317 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 KPRPQ5T749 579 aaPredicted RBP13.21□□□□□ -0.29
TPM1-214ENST00000558544 C9orf62Q8N4C0 152 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 MARC2Q969Z3 335 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 MRPL27Q9P0M9 148 aaKnown RBP13.21□□□□□ -0.29
TPM1-214ENST00000558544 MLXQ9UH92 298 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 SORL1Q92673 2214 aa13.21□□□□□ -0.29
TPM1-214ENST00000558544 IGHV7-4-1A0A0J9YVY3 117 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 FABP1P07148 127 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 RPL12P30050 165 aaKnown RBP13.2□□□□□ -0.3
TPM1-214ENST00000558544 BAXQ07812 192 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 FGL1Q08830 312 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 BTNL8Q6UX41 500 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 OR51G1Q8NGK1 321 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 OR5C1Q8NGR4 320 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 UQCC1Q9NVA1 299 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 FBN3Q75N90 2809 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 IGHV3OR16-13A0A075B7E8 117 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 IGHV3-74A0A0B4J1X5 117 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 UBE2L5PA0A1B0GUS4 154 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 GATA2P23769 480 aaPredicted RBP13.2□□□□□ -0.3
TPM1-214ENST00000558544 USF2Q15853 346 aaPredicted RBP13.2□□□□□ -0.3
TPM1-214ENST00000558544 TEPPQ6URK8 271 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 PBDC1Q9BVG4 233 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 TMEM147Q9BVK8 224 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 BOLA1Q9Y3E2 137 aa13.2□□□□□ -0.3
TPM1-214ENST00000558544 FXYD6-FXYD2A0A087WZ82 144 aa13.19□□□□□ -0.3
TPM1-214ENST00000558544 IZUMO1RA6ND01 250 aa13.19□□□□□ -0.3
TPM1-214ENST00000558544 APOHP02749 345 aaPredicted RBP13.19□□□□□ -0.3
TPM1-214ENST00000558544 PRB2P02812 416 aaPredicted RBP13.19□□□□□ -0.3
TPM1-214ENST00000558544 LYZP61626 148 aa13.19□□□□□ -0.3
TPM1-214ENST00000558544 CLINT1Q14677 625 aa13.19□□□□□ -0.3
TPM1-214ENST00000558544 VWC2Q2TAL6 325 aa13.19□□□□□ -0.3
TPM1-214ENST00000558544 DEFB114Q30KQ6 69 aa13.19□□□□□ -0.3
TPM1-214ENST00000558544 CD300EQ496F6 205 aaPredicted RBP13.19□□□□□ -0.3
TPM1-214ENST00000558544 TMEM182Q6ZP80 229 aaPredicted RBP13.19□□□□□ -0.3
TPM1-214ENST00000558544 CYP2G1PQ6ZSU1 146 aa13.19□□□□□ -0.3
TPM1-214ENST00000558544 RNF125Q96EQ8 232 aa13.19□□□□□ -0.3
TPM1-214ENST00000558544 METTL26Q96S19 204 aa13.19□□□□□ -0.3
TPM1-214ENST00000558544 TECRQ9NZ01 308 aaKnown RBP13.19□□□□□ -0.3
TPM1-214ENST00000558544 SMPXQ9UHP9 88 aa13.19□□□□□ -0.3
TPM1-214ENST00000558544 LSM4Q9Y4Z0 139 aaKnown RBP13.19□□□□□ -0.3
TPM1-214ENST00000558544 HSPB11Q9Y547 144 aa13.19□□□□□ -0.3
TPM1-214ENST00000558544 IGHV3-66A0A0C4DH42 116 aa13.18□□□□□ -0.3
TPM1-214ENST00000558544 WI2-2373I1.2A0A1W2PRP0 233 aa13.18□□□□□ -0.3
TPM1-214ENST00000558544 NPPCP23582 126 aa13.18□□□□□ -0.3
TPM1-214ENST00000558544 ATP6V1FQ16864 119 aa13.18□□□□□ -0.3
TPM1-214ENST00000558544 BPIFCQ8NFQ6 507 aa13.18□□□□□ -0.3
TPM1-214ENST00000558544 ST8SIA2Q92186 375 aa13.18□□□□□ -0.3
TPM1-214ENST00000558544 MGST2Q99735 147 aa13.18□□□□□ -0.3
TPM1-214ENST00000558544 RHPN1-AS1Q9BWJ2 59 aa13.18□□□□□ -0.3
TPM1-214ENST00000558544 MEGF8Q7Z7M0 2845 aa13.17□□□□□ -0.3
TPM1-214ENST00000558544 HMSDA8MTL9 139 aa13.17□□□□□ -0.3
TPM1-214ENST00000558544 CHEK1O14757 476 aa13.17□□□□□ -0.3
TPM1-214ENST00000558544 CXCL2P19875 107 aa13.17□□□□□ -0.3
TPM1-214ENST00000558544 CRYBB3P26998 211 aa13.17□□□□□ -0.3
TPM1-214ENST00000558544 LGALSLQ3ZCW2 172 aaPredicted RBP13.17□□□□□ -0.3
TPM1-214ENST00000558544 LCN12Q6JVE5 192 aa13.17□□□□□ -0.3
TPM1-214ENST00000558544 OR2K2Q8NGT1 345 aa13.17□□□□□ -0.3
TPM1-214ENST00000558544 SMIM3Q9BZL3 60 aa13.17□□□□□ -0.3
TPM1-214ENST00000558544 ZMAT5Q9UDW3 170 aaKnown RBP13.17□□□□□ -0.3
TPM1-214ENST00000558544 RABAC1Q9UI14 185 aa13.17□□□□□ -0.3
TPM1-214ENST00000558544 WDR83OSQ9Y284 106 aa13.17□□□□□ -0.3
TPM1-214ENST00000558544 ZNF256Q9Y2P7 627 aaPredicted RBP13.17□□□□□ -0.3
TPM1-214ENST00000558544 AGPAT2O15120 278 aa13.16□□□□□ -0.3
TPM1-214ENST00000558544 TMEM61Q8N0U2 210 aa13.16□□□□□ -0.3
TPM1-214ENST00000558544 PRR25Q96S07 402 aa13.16□□□□□ -0.3
TPM1-214ENST00000558544 RNF2Q99496 336 aa13.16□□□□□ -0.3
TPM1-214ENST00000558544 AURKAIP1Q9NWT8 199 aaPredicted RBP13.16□□□□□ -0.3
TPM1-214ENST00000558544 ARPC5O15511 151 aa13.15□□□□□ -0.3
TPM1-214ENST00000558544 CFDP00746 253 aaPredicted RBP13.15□□□□□ -0.3
TPM1-214ENST00000558544 GP9P14770 177 aa13.15□□□□□ -0.3
TPM1-214ENST00000558544 FGF7P21781 194 aa13.15□□□□□ -0.3
TPM1-214ENST00000558544 BMI1P35226 326 aa13.15□□□□□ -0.3
TPM1-214ENST00000558544 SELENOTP62341 195 aa13.15□□□□□ -0.3
TPM1-214ENST00000558544 ZNF546Q86UE3 836 aa13.15□□□□□ -0.3
TPM1-214ENST00000558544 NARS2Q96I59 477 aaKnown RBP13.15□□□□□ -0.3
TPM1-214ENST00000558544 VSIRQ9H7M9 311 aa13.15□□□□□ -0.3
TPM1-214ENST00000558544 TNFSF18Q9UNG2 199 aa13.15□□□□□ -0.3
TPM1-214ENST00000558544 LINC00869P0C866 280 aa13.14□□□□□ -0.31
TPM1-214ENST00000558544 ORM2P19652 201 aa13.14□□□□□ -0.31
TPM1-214ENST00000558544 NUP62P37198 522 aaPredicted RBP13.14□□□□□ -0.31
TPM1-214ENST00000558544 CAMLGP49069 296 aa13.14□□□□□ -0.31
TPM1-214ENST00000558544 DEFA6Q01524 100 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 642.5 ms