RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 OR4D5Q8NGN0 318 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 ENKURQ8TC29 256 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 ZNF414Q96IQ9 312 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 SPATA25Q9BR10 227 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 SRD5A3Q9H8P0 318 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 GPN1Q9HCN4 374 aaPredicted RBP6.34□□□□□ -1.39
TPM1-213ENST00000558400 PSENENQ9NZ42 101 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 GSKIPQ9P0R6 139 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 DNAH3Q8TD57 4116 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 LOC102724200A0A096LPH7 203 aaPredicted RBP6.33□□□□□ -1.4
TPM1-213ENST00000558400 IGHV3-49A0A0A0MS15 119 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 MPTX1A8MV57 137 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 DFFBO76075 338 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 IL4P05112 153 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 HNRNPCP07910 306 aaKnown RBP eCLIP6.33□□□□□ -1.4
TPM1-213ENST00000558400 PSG1P11464 419 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 POLR2GP62487 172 aaKnown RBP eCLIP6.33□□□□□ -1.4
TPM1-213ENST00000558400 ZBTB8BQ8NAP8 495 aaPredicted RBP6.33□□□□□ -1.4
TPM1-213ENST00000558400 ST8SIA2Q92186 375 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 RCHY1Q96PM5 261 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 TRGV9Q99603 122 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 RABAC1Q9UI14 185 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 TBC1D24Q9ULP9 559 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 SELENOKQ9Y6D0 94 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 U3KQE9 123 aa6.33□□□□□ -1.4
TPM1-213ENST00000558400 IGHV3OR16-13A0A075B7E8 117 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 IGHV3-74A0A0B4J1X5 117 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 KIR2DL5BA0A0G2JN68 375 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 KIR2DL5BA0A0G2JPC4 375 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 RBMY1BA6NDE4 496 aaKnown RBP6.32□□□□□ -1.4
TPM1-213ENST00000558400 C5orf51A6NDU8 294 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 RBMY1EA6NEQ0 496 aaKnown RBP6.32□□□□□ -1.4
TPM1-213ENST00000558400 FNDC10F2Z333 226 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 UBE2CO00762 179 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 PRAF2O60831 178 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 TSC22D2O75157 780 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 RBMY1DP0C7P1 496 aaKnown RBP6.32□□□□□ -1.4
TPM1-213ENST00000558400 PVALBP20472 110 aaPredicted RBP6.32□□□□□ -1.4
TPM1-213ENST00000558400 P2RY1P47900 373 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 APOC4P55056 127 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 OR8G2PQ6IF36 304 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 GSG1LQ6UXU4 331 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 TMEM144Q7Z5S9 345 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 S100A7AQ86SG5 101 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 KIR2DL5AQ8N109 375 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 OR10P1Q8NGE3 313 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 KIR2DL5BQ8NHK3 375 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 C2orf50Q96LR7 162 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 GGACTQ9BVM4 153 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 GGTLC1Q9BX51 225 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 MS4A6AQ9H2W1 248 aa6.32□□□□□ -1.4
TPM1-213ENST00000558400 IGKV3-7A0A075B6H7 116 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 FAM25EA8MYX2 175 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 INMT-MINDY4F8WBC2 141 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 L7N2F9 121 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 BUB3O43684 328 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 SSSCA1O60232 199 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 SCGB1D2O95969 90 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 MBPP02686 304 aaPredicted RBP6.31□□□□□ -1.4
TPM1-213ENST00000558400 APOHP02749 345 aaPredicted RBP6.31□□□□□ -1.4
TPM1-213ENST00000558400 PAX9P55771 341 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 VAMP2P63027 116 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 DLK1P80370 383 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 CYCSP99999 105 aaKnown RBP6.31□□□□□ -1.4
TPM1-213ENST00000558400 C1orf194Q5T5A4 169 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 C16orf54Q6UWD8 224 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 TMEM14EPQ6UXP3 125 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 WFDC3Q8IUB2 231 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 LILRB2Q8N423 598 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 GBGT1Q8N5D6 347 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 THAP8Q8NA92 274 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 RNF125Q96EQ8 232 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 CITED4Q96RK1 184 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 SEC22CQ9BRL7 303 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 MARVELD1Q9BSK0 173 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 NPVFQ9HCQ7 196 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 SEPSECSQ9HD40 501 aaKnown RBP6.31□□□□□ -1.4
TPM1-213ENST00000558400 FBXL17Q9UF56 701 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 SLC45A2Q9UMX9 530 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 RNF24Q9Y225 148 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 DNAH9Q9NYC9 4486 aa6.31□□□□□ -1.4
TPM1-213ENST00000558400 SACSQ9NZJ4 4579 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 IGKV1D-37A0A075B6S9 117 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 IGHV3-66A0A0C4DH42 116 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 C7orf66A4D0T2 115 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 PRSS46E5RG02 174 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 C3orf84H3BNL1 204 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 RLN2P04090 185 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 TFPI2P48307 235 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 SELENOTP62341 195 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 IFITM3Q01628 133 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 ZNF90Q03938 601 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 AKR1C1Q04828 323 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 USF2Q15853 346 aaPredicted RBP6.3□□□□□ -1.4
TPM1-213ENST00000558400 ODF3L2Q3SX64 289 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 Q6ZWC4 215 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 NRARPQ7Z6K4 114 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 STPG3Q8N7X2 389 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 BPIFCQ8NFQ6 507 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 PBDC1Q9BVG4 233 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms