RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 MAGT1Q9H0U3 335 aa8.72□□□□□ -1.01
HERC1-202ENST00000558324 PIGBOS1A0A0B4J2F0 54 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 PITX3O75364 302 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 SFT2D2O95562 160 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 LY6G6CO95867 125 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 HOXB5P09067 269 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 C4BPBP20851 252 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 ZNF90Q03938 601 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 OR2F1Q13607 317 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 GAMTQ14353 236 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 TRIQKQ629K1 86 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 LINC00476Q8WZB0 136 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 FBXL17Q9UF56 701 aa8.71□□□□□ -1.02
HERC1-202ENST00000558324 EPPK1P58107 5090 aaKnown RBP8.7□□□□□ -1.02
HERC1-202ENST00000558324 IGKV1D-37A0A075B6S9 117 aa8.7□□□□□ -1.02
HERC1-202ENST00000558324 BUB3O43684 328 aa8.7□□□□□ -1.02
HERC1-202ENST00000558324 ATF4P18848 351 aaPredicted RBP8.7□□□□□ -1.02
HERC1-202ENST00000558324 GPX4P36969 197 aaPredicted RBP8.7□□□□□ -1.02
HERC1-202ENST00000558324 AP2S1P53680 142 aaPredicted RBP8.7□□□□□ -1.02
HERC1-202ENST00000558324 NANOS2P60321 138 aaKnown RBP8.7□□□□□ -1.02
HERC1-202ENST00000558324 LYZP61626 148 aa8.7□□□□□ -1.02
HERC1-202ENST00000558324 RAB11AP62491 216 aa8.7□□□□□ -1.02
HERC1-202ENST00000558324 BAK1Q16611 211 aa8.7□□□□□ -1.02
HERC1-202ENST00000558324 SIGLEC15Q6ZMC9 328 aa8.7□□□□□ -1.02
HERC1-202ENST00000558324 LRTM2Q8N967 370 aa8.7□□□□□ -1.02
HERC1-202ENST00000558324 C11orf45Q8TAV5 145 aa8.7□□□□□ -1.02
HERC1-202ENST00000558324 PHLDA1Q8WV24 401 aaPredicted RBP8.7□□□□□ -1.02
HERC1-202ENST00000558324 NRN1Q9NPD7 142 aa8.7□□□□□ -1.02
HERC1-202ENST00000558324 CLEC5AQ9NY25 188 aa8.7□□□□□ -1.02
HERC1-202ENST00000558324 KLK5Q9Y337 293 aaPredicted RBP8.7□□□□□ -1.02
HERC1-202ENST00000558324 TMED3Q9Y3Q3 217 aa8.7□□□□□ -1.02
HERC1-202ENST00000558324 FAM90A26D6RGX4 464 aa8.69□□□□□ -1.02
HERC1-202ENST00000558324 H3BP45 60 aa8.69□□□□□ -1.02
HERC1-202ENST00000558324 ZNF701M0R085 212 aaPredicted RBP8.69□□□□□ -1.02
HERC1-202ENST00000558324 WRBO00258 174 aa8.69□□□□□ -1.02
HERC1-202ENST00000558324 MED6O75586 246 aa8.69□□□□□ -1.02
HERC1-202ENST00000558324 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
HERC1-202ENST00000558324 SPP1P10451 314 aa8.69□□□□□ -1.02
HERC1-202ENST00000558324 SLC25A6P12236 298 aa8.69□□□□□ -1.02
HERC1-202ENST00000558324 ATP5IP56385 69 aaPredicted RBP8.69□□□□□ -1.02
HERC1-202ENST00000558324 SNRPD3P62318 126 aaKnown RBP8.69□□□□□ -1.02
HERC1-202ENST00000558324 GGNBP1Q5YKI7 109 aa8.69□□□□□ -1.02
HERC1-202ENST00000558324 MORN3Q6PF18 240 aaPredicted RBP8.69□□□□□ -1.02
HERC1-202ENST00000558324 GSG1LQ6UXU4 331 aa8.69□□□□□ -1.02
HERC1-202ENST00000558324 DEDD2Q8WXF8 326 aa8.69□□□□□ -1.02
HERC1-202ENST00000558324 RAB40CQ96S21 281 aa8.69□□□□□ -1.02
HERC1-202ENST00000558324 C11orf68Q9H3H3 251 aaKnown RBP8.69□□□□□ -1.02
HERC1-202ENST00000558324 SYNGR2O43760 224 aa8.68□□□□□ -1.02
HERC1-202ENST00000558324 ADAP1O75689 374 aa8.68□□□□□ -1.02
HERC1-202ENST00000558324 FABP1P07148 127 aa8.68□□□□□ -1.02
HERC1-202ENST00000558324 SPANXN5Q5MJ07 72 aa8.68□□□□□ -1.02
HERC1-202ENST00000558324 PPP1R14BQ96C90 147 aa8.68□□□□□ -1.02
HERC1-202ENST00000558324 CIB3Q96Q77 187 aaPredicted RBP8.68□□□□□ -1.02
HERC1-202ENST00000558324 FLVCR2Q9UPI3 526 aa8.68□□□□□ -1.02
HERC1-202ENST00000558324 IGHV4-28A0A0C4DH34 117 aa8.67□□□□□ -1.02
HERC1-202ENST00000558324 C9orf170A2RU37 121 aa8.67□□□□□ -1.02
HERC1-202ENST00000558324 NDUFB6O95139 128 aa8.67□□□□□ -1.02
HERC1-202ENST00000558324 NUP62P37198 522 aaPredicted RBP8.67□□□□□ -1.02
HERC1-202ENST00000558324 DEFB1P60022 68 aa8.67□□□□□ -1.02
HERC1-202ENST00000558324 OR8G2PQ6IF36 304 aa8.67□□□□□ -1.02
HERC1-202ENST00000558324 Q8NAQ8 132 aa8.67□□□□□ -1.02
HERC1-202ENST00000558324 MFFQ9GZY8 342 aa8.67□□□□□ -1.02
HERC1-202ENST00000558324 PFDN2Q9UHV9 154 aa8.67□□□□□ -1.02
HERC1-202ENST00000558324 IGKV1OR2-108A0A075B7D4 117 aa8.66□□□□□ -1.02
HERC1-202ENST00000558324 NAP1L6A6NFF2 107 aa8.66□□□□□ -1.02
HERC1-202ENST00000558324 SNRPGP15A8MWD9 76 aa8.66□□□□□ -1.02
HERC1-202ENST00000558324 IGKV3-20P01619 116 aa8.66□□□□□ -1.02
HERC1-202ENST00000558324 RBMY1A1P0DJD3 496 aaKnown RBP8.66□□□□□ -1.02
HERC1-202ENST00000558324 RBMY1CP0DJD4 496 aa8.66□□□□□ -1.02
HERC1-202ENST00000558324 ANXA7P20073 488 aaKnown RBP8.66□□□□□ -1.02
HERC1-202ENST00000558324 UBE2MP61081 183 aaKnown RBP8.66□□□□□ -1.02
HERC1-202ENST00000558324 POLR2GP62487 172 aaKnown RBP eCLIP8.66□□□□□ -1.02
HERC1-202ENST00000558324 RPP30P78346 268 aaKnown RBP8.66□□□□□ -1.02
HERC1-202ENST00000558324 AKR1C1Q04828 323 aa8.66□□□□□ -1.02
HERC1-202ENST00000558324 RBMY1FQ15415 496 aaKnown RBP8.66□□□□□ -1.02
HERC1-202ENST00000558324 TMEM41BQ5BJD5 291 aa8.66□□□□□ -1.02
HERC1-202ENST00000558324 LINC00052Q96N35 136 aa8.66□□□□□ -1.02
HERC1-202ENST00000558324 TRGV9Q99603 122 aa8.66□□□□□ -1.02
HERC1-202ENST00000558324 SDHCQ99643 169 aaPredicted RBP8.66□□□□□ -1.02
HERC1-202ENST00000558324 WDR12Q9GZL7 423 aaKnown RBP8.66□□□□□ -1.02
HERC1-202ENST00000558324 XCL2Q9UBD3 114 aa8.66□□□□□ -1.02
HERC1-202ENST00000558324 SMCO3A2RU48 225 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 PRSS46E5RG02 174 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 OR4E1P0C645 316 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 GATA2P23769 480 aaPredicted RBP8.65□□□□□ -1.02
HERC1-202ENST00000558324 C4orf46Q504U0 113 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 GDF5OSQ5U4N7 250 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 ACOT7LQ6ZUV0 252 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 OR8I2Q8N0Y5 310 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 THAP8Q8NA92 274 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 COQ8AQ8NI60 647 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 SLC25A22Q9H936 323 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 TBC1D24Q9ULP9 559 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 STRAPQ9Y3F4 350 aaKnown RBP8.65□□□□□ -1.02
HERC1-202ENST00000558324 X6R8D5 127 aa8.65□□□□□ -1.02
HERC1-202ENST00000558324 CENPXA8MT69 81 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 H3BMM0 161 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 SSSCA1O60232 199 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 SCGB1D2O95969 90 aa8.64□□□□□ -1.03
HERC1-202ENST00000558324 IFNA21P01568 189 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms