RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 M0R2Z0 102 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 FOXH1O75593 365 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 OR2J3O76001 311 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 MSMBP08118 114 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 PPIAL4GP0DN37 164 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 LYNX1P0DP58 116 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 LINC00310P59036 64 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 TAS2R45P59539 299 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 TDRG1Q3Y452 100 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 SAMD13Q5VXD3 122 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 FAM231DQ6ZW35 169 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 MOGAT3Q86VF5 341 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 OR52E5Q8NH55 327 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 FAM103A1Q9BTL3 118 aaKnown RBP6.52□□□□□ -1.37
RTF1-205ENST00000558298 FGF23Q9GZV9 251 aaPredicted RBP6.52□□□□□ -1.37
RTF1-205ENST00000558298 HES4Q9HCC6 221 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 CCL28Q9NRJ3 127 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 PPIAL4AQ9Y536 164 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 DSCAML1Q8TD84 2053 aa6.52□□□□□ -1.37
RTF1-205ENST00000558298 SMIM27A0A1W2PRY6 76 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 OOEPA6NGQ2 149 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 H3BRM9 83 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 J3QT63 122 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 WNT9BO14905 357 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 TAX1BP3O14907 124 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 SIVA1O15304 175 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 NUPR1O60356 82 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 NUDT3O95989 172 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 LIPFP07098 398 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 OR9G9P0C7N8 305 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 IGLC1P0CG04 106 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 IAPPP10997 89 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 PSG2P11465 335 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 ZNF16P17020 682 aaPredicted RBP6.51□□□□□ -1.37
RTF1-205ENST00000558298 SCGB2A2Q13296 93 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 PIGYQ3MUY2 71 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 BVES-AS1Q5T3Y7 98 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 PRAMEF6Q5VXH4 476 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 TMEM136Q6ZRR5 245 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 OR9G4Q8NGQ1 327 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 OR1N2Q8NGR9 330 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 TSKUQ8WUA8 353 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 EAF1Q96JC9 268 aaPredicted RBP6.51□□□□□ -1.37
RTF1-205ENST00000558298 MEGF9Q9H1U4 602 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 POLDIP2Q9Y2S7 368 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 WASHC3Q9Y3C0 194 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 ATRQ13535 2644 aa6.51□□□□□ -1.37
RTF1-205ENST00000558298 HELTA6NFD8 242 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 A6NJY4 79 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 SPRY1O43609 319 aaPredicted RBP6.5□□□□□ -1.37
RTF1-205ENST00000558298 ANGPTL7O43827 346 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 IGKV1D-33P01593 117 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 IGKV1-33P01594 117 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 CT45A6P0DMU7 189 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 CT45A5P0DMU8 189 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 CT45A7P0DMV0 189 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 SRIP30626 198 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 ERVK11-1P61568 191 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 RPL31P62899 125 aaKnown RBP6.5□□□□□ -1.37
RTF1-205ENST00000558298 ARL16Q0P5N6 197 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 MAJINQ3KP22 176 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 CT45A1Q5HYN5 189 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 TCTEX1D4Q5JR98 221 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 TRAT1Q6PIZ9 186 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 ZNF841Q6ZN19 808 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 PQLC2Q6ZP29 291 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 RNF144BQ7Z419 303 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 LHFPL4Q7Z7J7 247 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 HAPLN4Q86UW8 402 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 BPIFA4PQ86YQ2 179 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 FGFRL1Q8N441 504 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 ZNF645Q8N7E2 425 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 FER1L6-AS1Q8NA97 138 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 CT45A3Q8NHU0 189 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 OCC1Q8TAD7 63 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 PIGCQ92535 297 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 TMEM186Q96B77 213 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 MAP1LC3CQ9BXW4 147 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 VCX2Q9H322 139 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 ZNF581Q9P0T4 197 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 KCNS2Q9ULS6 477 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 RFNGQ9Y644 331 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 V9GYV3 84 aa6.5□□□□□ -1.37
RTF1-205ENST00000558298 FAM231BA6NCW3 169 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 FSHBP01225 129 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 IGKV1-5P01602 117 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 HBZP02008 142 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 HIST1H1EP10412 219 aaKnown RBP6.49□□□□□ -1.37
RTF1-205ENST00000558298 PSG1P11464 419 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 KIR2DS2P43631 304 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 CT83Q5H943 113 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 ZNF788Q6ZQV5 615 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 TCF23Q7RTU1 214 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 SPATA12Q7Z6I5 190 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 OR4X2Q8NGF9 303 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 C8orf46Q8TAG6 207 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 LRRC29Q8WV35 223 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 HSD17B10Q99714 261 aaKnown RBP6.49□□□□□ -1.37
RTF1-205ENST00000558298 SIGMAR1Q99720 223 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 SSBP3Q9BWW4 388 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms