RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 NECAP1Q8NC96 275 aa6.74□□□□□ -1.33
USP3-208ENST00000558285 OR1L6Q8NGR2 347 aa6.74□□□□□ -1.33
USP3-208ENST00000558285 OR51H1Q8NH63 302 aa6.74□□□□□ -1.33
USP3-208ENST00000558285 SEC22AQ96IW7 307 aa6.74□□□□□ -1.33
USP3-208ENST00000558285 CYYR1Q96J86 154 aa6.74□□□□□ -1.33
USP3-208ENST00000558285 MS4A10Q96PG2 267 aa6.74□□□□□ -1.33
USP3-208ENST00000558285 ZNF430Q9H8G1 570 aaPredicted RBP6.74□□□□□ -1.33
USP3-208ENST00000558285 PEMTQ9UBM1 199 aa6.74□□□□□ -1.33
USP3-208ENST00000558285 VAX2Q9UIW0 290 aa6.74□□□□□ -1.33
USP3-208ENST00000558285 TNFSF12O43508 249 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 SERPINE2P07093 398 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 AKR1C3P42330 323 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 RANP62826 216 aaKnown RBP6.73□□□□□ -1.33
USP3-208ENST00000558285 NDPQ00604 133 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 PPP1R1AQ13522 171 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 TMEM241Q24JQ0 296 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 C19orf54Q5BKX5 351 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 OR5T1Q8NG75 326 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 ACY3Q96HD9 319 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 OR5B12Q96R08 314 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 KLK15Q9H2R5 256 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 PRNDQ9UKY0 176 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 BORCS7-ASMTA0A0B4J1R7 106 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 NPIPB5A8MRT5 1133 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 SNRPCP09234 159 aaKnown RBP6.73□□□□□ -1.33
USP3-208ENST00000558285 RND2P52198 227 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 ID3Q02535 119 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 EGFEM1PQ0D2K5 195 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 PNRC1Q12796 327 aaPredicted RBP6.73□□□□□ -1.33
USP3-208ENST00000558285 POU2AF1Q16633 256 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 RPEL1Q2QD12 228 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 DEFB136Q30KP8 78 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 C1orf194Q5T5A4 169 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 ZNF818PQ6ZRF7 136 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 TTC9CQ8N5M4 171 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 OR10G4Q8NGN3 311 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 TMEM56Q96MV1 263 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 EIF5A2Q9GZV4 153 aaKnown RBP6.73□□□□□ -1.33
USP3-208ENST00000558285 GNB4Q9HAV0 340 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 SLC2A9Q9NRM0 540 aa6.73□□□□□ -1.33
USP3-208ENST00000558285 PEF1Q9UBV8 284 aaKnown RBP6.73□□□□□ -1.33
USP3-208ENST00000558285 C14orf166Q9Y224 244 aaKnown RBP6.73□□□□□ -1.33
USP3-208ENST00000558285 TRBV24-1A0A075B6N3 115 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 SRRM4A7MD48 611 aaKnown RBP6.72□□□□□ -1.33
USP3-208ENST00000558285 K7EP13 123 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 K7EPK0 472 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 CCSO14618 274 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 SAP30O75446 220 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 RBMXL2O75526 392 aaKnown RBP6.72□□□□□ -1.33
USP3-208ENST00000558285 SCGB2A1O75556 95 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 PGLYRP1O75594 196 aaPredicted RBP6.72□□□□□ -1.33
USP3-208ENST00000558285 IGLV2-14P01704 120 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 TRGC1P0CF51 173 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 EGR2P11161 476 aaPredicted RBP6.72□□□□□ -1.33
USP3-208ENST00000558285 PTHLHP12272 177 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 GNRHRP30968 328 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 LINC00205P59089 165 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 RPL30P62888 115 aaKnown RBP6.72□□□□□ -1.33
USP3-208ENST00000558285 TMEM128Q5BJH2 165 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 DEFB121Q5J5C9 76 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 HIST2H2BDQ6DRA6 164 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 OR4A47Q6IF82 309 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 OR1L8Q8NGR8 309 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 Q8WTZ3 238 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 TVP23CQ96ET8 276 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 C2orf50Q96LR7 162 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 QTRT1Q9BXR0 403 aaKnown RBP6.72□□□□□ -1.33
USP3-208ENST00000558285 TPSG1Q9NRR2 321 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 TMEM140Q9NV12 185 aa6.72□□□□□ -1.33
USP3-208ENST00000558285 PRSS47A8MTI9 375 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 H0Y980 276 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 IGHV3-11P01762 117 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 PPBPP02775 128 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 RBX1P62877 108 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 RHOGP84095 191 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 EIF4EBP1Q13541 118 aaPredicted RBP6.71□□□□□ -1.34
USP3-208ENST00000558285 H2BFWTQ7Z2G1 175 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 SLC35G3Q8N808 338 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 ADAD2Q8NCV1 583 aaKnown RBP6.71□□□□□ -1.34
USP3-208ENST00000558285 OR2D3Q8NGH3 330 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 OR5B3Q8NH48 314 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 OR4A16Q8NH70 328 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 EEF1AKMT3Q96AZ1 226 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 TMEM18Q96B42 140 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 C5orf30Q96GV9 206 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 DUX3Q96PT4 197 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 CTDSP1Q9GZU7 261 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 HIPK2Q9H2X6 1198 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 AURKAIP1Q9NWT8 199 aaPredicted RBP6.71□□□□□ -1.34
USP3-208ENST00000558285 ZFP30Q9Y2G7 519 aa6.71□□□□□ -1.34
USP3-208ENST00000558285 H0YIZ8 118 aa6.7□□□□□ -1.34
USP3-208ENST00000558285 UPK2O00526 184 aa6.7□□□□□ -1.34
USP3-208ENST00000558285 SOX15O60248 233 aa6.7□□□□□ -1.34
USP3-208ENST00000558285 NPSP0C0P6 89 aa6.7□□□□□ -1.34
USP3-208ENST00000558285 HOXD3P31249 432 aaPredicted RBP6.7□□□□□ -1.34
USP3-208ENST00000558285 TAGLN2P37802 199 aaKnown RBP6.7□□□□□ -1.34
USP3-208ENST00000558285 CAMLGP49069 296 aa6.7□□□□□ -1.34
USP3-208ENST00000558285 IL15RAQ13261 267 aa6.7□□□□□ -1.34
USP3-208ENST00000558285 RPL7L1Q6DKI1 246 aaKnown RBP6.7□□□□□ -1.34
USP3-208ENST00000558285 C18orf65Q6ZTR6 163 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms