RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 OR4A5Q8NH83 315 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 SMIM8Q96KF7 97 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 CIB3Q96Q77 187 aaPredicted RBP5.71□□□□□ -1.5
SPG11-205ENST00000558080 AIFM2Q9BRQ8 373 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 TUBA4BQ9H853 241 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 MED9Q9NWA0 146 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 BET1LQ9NYM9 111 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 SIGLEC8Q9NYZ4 499 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 HSPB7Q9UBY9 170 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 PFDN2Q9UHV9 154 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 DMRT1Q9Y5R6 373 aa5.71□□□□□ -1.5
SPG11-205ENST00000558080 HUWE1Q7Z6Z7 4374 aaKnown RBP5.7□□□□□ -1.5
SPG11-205ENST00000558080 C3orf84H3BNL1 204 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 DFFBO76075 338 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 NXPH3O95157 252 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 CRYGCP07315 174 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 NMBP08949 121 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 HIST1H1BP16401 226 aaKnown RBP5.7□□□□□ -1.5
SPG11-205ENST00000558080 CTRB1P17538 263 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 ARL3P36405 182 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 SULT1A1P50225 295 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 PAX9P55771 341 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 OR2B8PP59922 312 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 POU2AF1Q16633 256 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 CD300EQ496F6 205 aaPredicted RBP5.7□□□□□ -1.5
SPG11-205ENST00000558080 AARDQ4LEZ3 155 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 CTRB2Q6GPI1 263 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 GTSCR1Q86UQ5 136 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 COMMD7Q86VX2 200 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 OR10W1Q8NGF6 305 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 OR1S2Q8NGQ3 325 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 OR52E5Q8NH55 327 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 OR4A16Q8NH70 328 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 MUC7Q8TAX7 377 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 DYNLRB2Q8TF09 96 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 EEF1AKMT3Q96AZ1 226 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 CCDC140Q96MF4 163 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 SMIM3Q9BZL3 60 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 COMMD5Q9GZQ3 224 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 ARV1Q9H2C2 271 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 RBKSQ9H477 322 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 TMEM140Q9NV12 185 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 PSENENQ9NZ42 101 aa5.7□□□□□ -1.5
SPG11-205ENST00000558080 IGLV11-55A0A075B6I3 123 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 TEX50A0A1B0GTY4 177 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 IGLC7A0M8Q6 106 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 ZNF320A2RRD8 509 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 MFSD2BA6NFX1 497 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 C9orf118A6NHY6 69 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 C2orf70A6NJV1 201 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 ZNF785A8K8V0 405 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 CEBPZOSA8MTT3 80 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 A8MZ25 164 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 TMEM50AO95807 157 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 CLEC3BP05452 202 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 IAPPP10997 89 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 FOLR2P14207 255 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 CD81P60033 236 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 SPCS3P61009 180 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 HBG1P69891 147 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 HBG2P69892 147 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 RPP30P78346 268 aaKnown RBP5.69□□□□□ -1.5
SPG11-205ENST00000558080 NHLH2Q02577 135 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 GUCA2BQ16661 112 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 HAGHQ16775 308 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 DEFB114Q30KQ6 69 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 FAM106AQ4KMX7 169 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 FAM209BQ5JX69 171 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 FAM74A1Q5RGS3 127 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 OR2K2Q8NGT1 345 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 DTD1Q8TEA8 209 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 TMED6Q8WW62 240 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 CACNG8Q8WXS5 425 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 BSCL2Q96G97 398 aaPredicted RBP5.69□□□□□ -1.5
SPG11-205ENST00000558080 FAM210AQ96ND0 272 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 ATP5SQ99766 215 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 TM2D3Q9BRN9 247 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 GINS3Q9BRX5 216 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 HINT2Q9BX68 163 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 PLEKHA3Q9HB20 300 aa5.69□□□□□ -1.5
SPG11-205ENST00000558080 AGRNO00468 2067 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 TRBV7-1A0A0A6YYK4 115 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 IGHV3-21A0A0B4J1V1 117 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 IGHV3-35A0A0C4DH35 117 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 C15orf61A6NNL5 157 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 H3BP45 60 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 LGALS9O00182 355 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 CST7O76096 145 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 IFNA5P01569 189 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 IFNA17P01571 189 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 CD7P09564 240 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 SEC11BP0C7V7 166 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 OR13C7P0DN81 318 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 CBLN1P23435 193 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 GPR183P32249 361 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 SULT1A2P50226 295 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 RAB5CP51148 216 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 CLINT1Q14677 625 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 KLK9Q2XQG4 91 aa5.68□□□□□ -1.5
SPG11-205ENST00000558080 TM4SF20Q53R12 229 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms