RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 SLC38A11Q08AI6 406 aa19.29■□□□□ 0.68
SMAD6-202ENST00000557916 TMEM217Q8N7C4 229 aa19.29■□□□□ 0.68
SMAD6-202ENST00000557916 OR51G1Q8NGK1 321 aa19.29■□□□□ 0.68
SMAD6-202ENST00000557916 RNF126Q9BV68 326 aa19.29■□□□□ 0.68
SMAD6-202ENST00000557916 RHPN1-AS1Q9BWJ2 59 aa19.29■□□□□ 0.68
SMAD6-202ENST00000557916 NPPCP23582 126 aa19.28■□□□□ 0.68
SMAD6-202ENST00000557916 METTL26Q96S19 204 aa19.28■□□□□ 0.68
SMAD6-202ENST00000557916 IGHV3OR16-13A0A075B7E8 117 aa19.27■□□□□ 0.68
SMAD6-202ENST00000557916 IGHV3-74A0A0B4J1X5 117 aa19.27■□□□□ 0.68
SMAD6-202ENST00000557916 OR2F1Q13607 317 aa19.27■□□□□ 0.68
SMAD6-202ENST00000557916 SLC25A31Q9H0C2 315 aa19.27■□□□□ 0.68
SMAD6-202ENST00000557916 SORL1Q92673 2214 aa19.27■□□□□ 0.68
SMAD6-202ENST00000557916 CHEK1O14757 476 aa19.26■□□□□ 0.67
SMAD6-202ENST00000557916 APOHP02749 345 aaPredicted RBP19.26■□□□□ 0.67
SMAD6-202ENST00000557916 S100A11P31949 105 aa19.26■□□□□ 0.67
SMAD6-202ENST00000557916 HBG1P69891 147 aa19.26■□□□□ 0.67
SMAD6-202ENST00000557916 HBG2P69892 147 aa19.26■□□□□ 0.67
SMAD6-202ENST00000557916 TMEM61Q8N0U2 210 aa19.26■□□□□ 0.67
SMAD6-202ENST00000557916 CRYBB3P26998 211 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 BMI1P35226 326 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 USF2Q15853 346 aaPredicted RBP19.25■□□□□ 0.67
SMAD6-202ENST00000557916 RBPMS2Q6ZRY4 209 aaKnown RBP19.25■□□□□ 0.67
SMAD6-202ENST00000557916 LILRB2Q8N423 598 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 RNF125Q96EQ8 232 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 ZNF785A8K8V0 405 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 K7EIL1 84 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 GUCA2BQ16661 112 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 LAMTOR1Q6IAA8 161 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 TEPPQ6URK8 271 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 ASB13Q8WXK3 278 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 ST8SIA2Q92186 375 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 RNF2Q99496 336 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 PBDC1Q9BVG4 233 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 VSIRQ9H7M9 311 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 MBD2Q9UBB5 411 aa19.25■□□□□ 0.67
SMAD6-202ENST00000557916 TRAV25A0A0B4J276 109 aa19.24■□□□□ 0.67
SMAD6-202ENST00000557916 IGHV3-66A0A0C4DH42 116 aa19.24■□□□□ 0.67
SMAD6-202ENST00000557916 HNRNPCP07910 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMAD6-202ENST00000557916 GIPP09681 153 aaPredicted RBP19.24■□□□□ 0.67
SMAD6-202ENST00000557916 EWSR1Q01844 656 aaKnown RBP eCLIP19.24■□□□□ 0.672e-6■■□□□ 13.2
SMAD6-202ENST00000557916 NHLH2Q02577 135 aa19.24■□□□□ 0.67
SMAD6-202ENST00000557916 NARS2Q96I59 477 aaKnown RBP19.24■□□□□ 0.67
SMAD6-202ENST00000557916 A0A1W2PS18 150 aa19.23■□□□□ 0.67
SMAD6-202ENST00000557916 LYZP61626 148 aa19.23■□□□□ 0.67
SMAD6-202ENST00000557916 CYP2G1PQ6ZSU1 146 aa19.23■□□□□ 0.67
SMAD6-202ENST00000557916 BPIFCQ8NFQ6 507 aa19.23■□□□□ 0.67
SMAD6-202ENST00000557916 THAP6Q8TBB0 222 aa19.23■□□□□ 0.67
SMAD6-202ENST00000557916 MRAPQ8TCY5 172 aa19.23■□□□□ 0.67
SMAD6-202ENST00000557916 TMEM231Q9H6L2 316 aa19.23■□□□□ 0.67
SMAD6-202ENST00000557916 UQCC1Q9NVA1 299 aa19.23■□□□□ 0.67
SMAD6-202ENST00000557916 RABAC1Q9UI14 185 aa19.23■□□□□ 0.67
SMAD6-202ENST00000557916 CFDP00746 253 aaPredicted RBP19.22■□□□□ 0.67
SMAD6-202ENST00000557916 GATA2P23769 480 aaPredicted RBP19.22■□□□□ 0.67
SMAD6-202ENST00000557916 ATP6V1FQ16864 119 aa19.22■□□□□ 0.67
SMAD6-202ENST00000557916 TMEM182Q6ZP80 229 aaPredicted RBP19.22■□□□□ 0.67
SMAD6-202ENST00000557916 TMEM147Q9BVK8 224 aa19.22■□□□□ 0.67
SMAD6-202ENST00000557916 LSM4Q9Y4Z0 139 aaKnown RBP19.22■□□□□ 0.67
SMAD6-202ENST00000557916 U3KQE9 123 aa19.22■□□□□ 0.67
SMAD6-202ENST00000557916 LYL1P12980 280 aa19.21■□□□□ 0.67
SMAD6-202ENST00000557916 RAP2BP61225 183 aa19.21■□□□□ 0.67
SMAD6-202ENST00000557916 BAXQ07812 192 aa19.21■□□□□ 0.67
SMAD6-202ENST00000557916 VWC2Q2TAL6 325 aa19.21■□□□□ 0.67
SMAD6-202ENST00000557916 TSPAN4O14817 238 aa19.2■□□□□ 0.66
SMAD6-202ENST00000557916 SELENOTP62341 195 aa19.2■□□□□ 0.66
SMAD6-202ENST00000557916 OR5C1Q8NGR4 320 aa19.2■□□□□ 0.66
SMAD6-202ENST00000557916 GRAMD2BQ96HH9 432 aa19.2■□□□□ 0.66
SMAD6-202ENST00000557916 RPL12P30050 165 aaKnown RBP19.19■□□□□ 0.66
SMAD6-202ENST00000557916 EIF2B2P49770 351 aaKnown RBP19.19■□□□□ 0.66
SMAD6-202ENST00000557916 FGL1Q08830 312 aa19.19■□□□□ 0.66
SMAD6-202ENST00000557916 DEFB121Q5J5C9 76 aa19.19■□□□□ 0.66
SMAD6-202ENST00000557916 TCF24Q7RTU0 167 aa19.19■□□□□ 0.66
SMAD6-202ENST00000557916 GTSCR1Q86UQ5 136 aa19.19■□□□□ 0.66
SMAD6-202ENST00000557916 DFFBO76075 338 aa19.18■□□□□ 0.66
SMAD6-202ENST00000557916 CD5P06127 495 aa19.18■□□□□ 0.66
SMAD6-202ENST00000557916 PFDN2Q9UHV9 154 aa19.18■□□□□ 0.66
SMAD6-202ENST00000557916 WDR83OSQ9Y284 106 aa19.18■□□□□ 0.66
SMAD6-202ENST00000557916 UBE2L5PA0A1B0GUS4 154 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 AGPAT2O15120 278 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 RAB31Q13636 194 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 Q5BKY6 102 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 FAM90A2PQ658T7 463 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 MGST2Q99735 147 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 SPAG8Q99932 426 aaPredicted RBP19.17■□□□□ 0.66
SMAD6-202ENST00000557916 ORM2P19652 201 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 ZNF546Q86UE3 836 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 Q8N1Y9 231 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 OR2T35Q8NGX2 323 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 SLC45A2Q9UMX9 530 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 HSPB11Q9Y547 144 aa19.17■□□□□ 0.66
SMAD6-202ENST00000557916 IGKV3-7A0A075B6H7 116 aa19.16■□□□□ 0.66
SMAD6-202ENST00000557916 BUB3O43684 328 aa19.16■□□□□ 0.66
SMAD6-202ENST00000557916 LINC00869P0C866 280 aa19.16■□□□□ 0.66
SMAD6-202ENST00000557916 NUP62P37198 522 aaPredicted RBP19.16■□□□□ 0.66
SMAD6-202ENST00000557916 CAMLGP49069 296 aa19.16■□□□□ 0.66
SMAD6-202ENST00000557916 CD81P60033 236 aa19.16■□□□□ 0.66
SMAD6-202ENST00000557916 RPL11P62913 178 aaKnown RBP19.16■□□□□ 0.66
SMAD6-202ENST00000557916 CLINT1Q14677 625 aa19.16■□□□□ 0.66
SMAD6-202ENST00000557916 C16orf54Q6UWD8 224 aa19.16■□□□□ 0.66
SMAD6-202ENST00000557916 OR1B1Q8NGR6 318 aa19.16■□□□□ 0.66
SMAD6-202ENST00000557916 CHAC2Q8WUX2 184 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms